FFCP PHASE1:Hg19::chr2:157292112..157292128,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2820 | |EntrezGene=2820 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4456 | |HGNC=4456 | ||
|TSSclassifier=strong | |||
|UniProt=P43304 | |UniProt=P43304 | ||
|association_with_transcript=147bp_to_NM_001083112,uc002tzf.3,uc010zch.1_5end | |association_with_transcript=147bp_to_NM_001083112,uc002tzf.3,uc010zch.1_5end | ||
|cluster_id=chr2:157292112..157292128,+ | |||
|description=CAGE_peak_12_at_GPD2_5end | |description=CAGE_peak_12_at_GPD2_5end | ||
|id=chr2:157292112..157292128,+ | |id=chr2:157292112..157292128,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.99e-08!254 | |ontology_enrichment_celltype=CL:0000066!1.99e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.86e-09;7!CL:0000586;2.86e-09;7!CL:0000123;6.04e-09;2!CL:0000242;6.04e-09;2!CL:0000312;1.40e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.54e-09,7;CL:0000586,2.54e-09,7;CL:0000242,6.22e-09,2;CL:0000066,1.07e-08,253;CL:0000312,2.02e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0010122;6.04e-09;2 | |||
|ontology_enrichment_disease=DOID:305!2.23e-22!106;DOID:0050687!1.03e-18!143;DOID:162!3.46e-11!235;DOID:14566!1.29e-10!239;DOID:299!2.05e-08!25 | |ontology_enrichment_disease=DOID:305!2.23e-22!106;DOID:0050687!1.03e-18!143;DOID:162!3.46e-11!235;DOID:14566!1.29e-10!239;DOID:299!2.05e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:305;1.56e-08;106!DOID:3095;7.84e-08;22!DOID:2994;7.84e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.68e-18,106;DOID:0050687,2.80e-14,143;DOID:162,2.82e-08,235;DOID:14566,5.82e-08,239;DOID:3095,7.07e-08,22;DOID:2994,7.07e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0003080!9.28e-08!42;UBERON:0000955!1.63e-07!69;UBERON:0006238!1.63e-07!69;UBERON:0001017!1.81e-07!82;UBERON:0002780!2.84e-07!41;UBERON:0001890!2.84e-07!41;UBERON:0006240!2.84e-07!41;UBERON:0005743!4.37e-07!86;UBERON:0002020!6.28e-07!34;UBERON:0003528!6.28e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0005383;8.66e-13;3!UBERON:0005382;8.66e-13;3!UBERON:0000369;1.07e-09;4!UBERON:0002435;1.07e-09;4!UBERON:0000204;1.07e-09;4!UBERON:0001954;4.77e-09;2!UBERON:0003022;4.77e-09;2!UBERON:0002421;4.77e-09;2!UBERON:0002600;4.77e-09;2!UBERON:0001873;6.04e-09;2!UBERON:0000473;6.59e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,3.73e-13,3;UBERON:0005382,3.73e-13,3;UBERON:0000369,5.74e-10,4;UBERON:0002435,5.74e-10,4;UBERON:0000204,5.74e-10,4;UBERON:0010082,5.74e-10,4;UBERON:0001873,3.17e-09,2;UBERON:0010122,3.17e-09,2;UBERON:0001954,9.94e-09,2;UBERON:0003022,9.94e-09,2;UBERON:0002421,9.94e-09,2;UBERON:0002600,9.94e-09,2;UBERON:0000473,4.72e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.410623275218653,0.251085279189606,0.0764134057479513,0.0821005894499457,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0.32389366601898,0,0.436194716338694,0,0,0.697287110717054,0.411167888021826,0.619412741790207,0,0.512321413058201,0.47296445977717,0.344745680736619,0,0,0.188242339542605,0.545812300115692,0,0,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0.870627715885752,0,0,0,0,0,0,0,0.632924774881769,0,0.425208599930087,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.196468613246569,0,0,0,0,0.132957960518865,0.238490624305342,0.571994910780128,0.371457501329565,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0.10075209822764,0,0.386521706326594,0,0.573609190778008,0.609868530647977,0.397589304964456,0.232387885739037,0.829288440122964,1.51392510525377,1.09493207722749,0,0,0,0,0,0.473227200159376,1.01150814046861,0.241011029883482,0.55146986366197,0.653638332277218,0.474541238222193,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,1.35287282397425,0.343135620597051,0,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0.234004265139238,0.445893486866185,0,0.503946384596579,0.283550194484773,0.179117045405697,0,0,0.492663237895943,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0,0,0.22001485746285,0,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0.215714200818617,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0.232420756919918,1.57117284469109,0,0.0920809889358963,0.114814448164607,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0.447749509444357,0.219259876645935,0.261435451024901,0.512900250232778,0,0,0.309123034943167,0.54941678891006,0.165018999841176,0,0,1.6068392984416,0,0.308097234229289,0,0,0,0,0.170453254832202,0,0,1.34533047155574,0.510450849978337,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0.278406173895242,0,0.270455678475983,0,0,0.935702702041099,0.293016358543788,0.121360521749513,0,0,0.47748896947538,0.890894042497916,0.307160702099232,0.994147647766298,0.562677665642051,0,0,0,0.19924798825107,0.276283915531148,0.755798243562828,0.102268682502155,0.123084805461069,0,0.269605053441981,0.716084698702437,0,0,0,0,0.969332746095218,0.185536196323703,1.99613798001194,2.60427761085233,0.0874599999961957,0.724999575434793,0.227586896570999,0,0,0.344743373241465,0.291604613383254,0.347249989866585,1.77148277162768,2.53252521113357,0,0,0,0.219385397153973,0,0.278847488557207,0.153900517007594,0.113942055847001,0,0,2.49888955420619,0,0.366390373607449,0,0,0.31396051279005,0.332423363800313,0,0,0,0,0,0.210998064528027,1.14262965711403,1.41353071433941,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,1.1713222286267,0,0,0,0,2.41981432097328,0.30607276163049,0,0.450970258243478,0.518440956986236,0,0,0,1.19472429772959,4.55375273647668,0,0.347119476670262,0.587954384486266,0.174118413160805,0,0,0.677294319023596,1.38869702463753,0.328461828212837,0.193978032976839,0,0.225980740780532,0.137041924646751,0,0.443175571691151,1.17330829640882,0.400794101257669,0,0.19980960958213,1.58499458869517,0.114536596165916,0.343189995723929,0.14405479798815,0.124252535565433,1.17847017308398,0.271808412147228,0,0.305994652908965,0,0,0,2.55493176133945,0,0,0,0,0.717873024576814,0.399358000997982,0.429226048136571,0.446342914883745,0.134366944973453,0,0,0,0,0,1.47641222272123,0,3.97614844904652,1.0896272488926,1.12527203925513,0.962776056180637,0.415440338029185,0.899895566206002,0.77380195455795,0.485996453264197,0,0.551639951094387,0.262272940674991,0.105600336519406,0.537862017998534,0.575745591958336,0,0,0,0,0,0,0,0.082092520749339,0.340776043570843,0.113312091520126,0.146552233678082,0,0.387848869084652,0.39669780522807,1.71086837884329,0.704815022316672,0.320362237703084,0.157204305099666,0,0.496166021811951,0,0.121792598380896,0,0,0,0,0,1.09937867375164,0,0.610131324509816,0.3755727921195,0,0.665574309221114,0.18628920882415,0.415045904808692,0.249960815924213,0.606596470166591,0,0,1.40500471742064,2.3187364577732,0,0,0,0,0,0,0,0,0,0.295710299979268,0,0,0.310525913752519,0,0.53168342911599,0.521745061811734,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,1.50109113962448,0.26099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| ||
|short_description=p12@GPD2 | |short_description=p12@GPD2 | ||
}} | }} |
Latest revision as of 16:22, 17 September 2015
Short description: | p12@GPD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_GPD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 147bp_to_NM_001083112, uc002tzf.3, uc010zch.1_5end |
EntrezGene: | GPD2 |
HGNC: | 4456 |
UniProt: | P43304 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.54e-09 | 7 |
germ cell | 2.54e-09 | 7 |
Merkel cell | 6.22e-09 | 2 |
epithelial cell | 1.07e-08 | 253 |
keratinocyte | 2.02e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
caudate-putamen | 3.73e-13 | 3 |
dorsal striatum | 3.73e-13 | 3 |
corpus striatum | 5.74e-10 | 4 |
striatum | 5.74e-10 | 4 |
ventral part of telencephalon | 5.74e-10 | 4 |
future corpus striatum | 5.74e-10 | 4 |
caudate nucleus | 3.17e-09 | 2 |
future caudate nucleus | 3.17e-09 | 2 |
Ammon's horn | 9.94e-09 | 2 |
lobe parts of cerebral cortex | 9.94e-09 | 2 |
hippocampal formation | 9.94e-09 | 2 |
limbic lobe | 9.94e-09 | 2 |
testis | 4.72e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.68e-18 | 106 |
cell type cancer | 2.80e-14 | 143 |
cancer | 2.82e-08 | 235 |
disease of cellular proliferation | 5.82e-08 | 239 |
germ cell and embryonal cancer | 7.07e-08 | 22 |
germ cell cancer | 7.07e-08 | 22 |