FFCP PHASE1:Hg19::chr14:21236500..21236512,+: Difference between revisions
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|id=chr14:21236500..21236512,+
|short_description=p3@EDDM3B
|description=CAGE_peak_3_at_EDDM3B_5end
|association_with_transcript=-73bp_to_ENST00000326783,NM_022360,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64184 | |EntrezGene=64184 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19223 | |HGNC=19223 | ||
|TSSclassifier=strong | |||
|UniProt=P56851 | |UniProt=P56851 | ||
|association_with_transcript=-73bp_to_ENST00000326783,NM_022360,uc001vyd.2_5end | |||
|cluster_id=chr14:21236500..21236512,+ | |||
|coexpression_cluster_id=C39 | |||
|description=CAGE_peak_3_at_EDDM3B_5end | |||
|id=chr14:21236500..21236512,+ | |||
|ontology_enrichment_celltype=CL:0002563!9.11e-07!4 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.32e-26;2!UBERON:0009117;1.04e-20;10!UBERON:0005564;1.04e-20;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!1.17e-32!11;UBERON:0006947!1.09e-30!3;UBERON:0004054!1.09e-30!3;UBERON:0003101!2.63e-25!22;UBERON:0000079!2.63e-25!22;UBERON:0001301!1.07e-23!1;UBERON:0001000!1.34e-23!1;UBERON:0005352!1.34e-23!1;UBERON:0005904!2.63e-23!4;UBERON:0000473!4.42e-12!8;UBERON:0005156!1.41e-09!59;UBERON:0000990!1.41e-09!59;UBERON:0003133!8.12e-08!48;UBERON:0002370!8.61e-07!4;UBERON:0005058!8.61e-07!4;UBERON:0009113!8.61e-07!4;UBERON:0003295!8.61e-07!4;UBERON:0005562!8.61e-07!4;UBERON:0001242!9.11e-07!4;UBERON:0001262!9.11e-07!4;UBERON:0004786!9.11e-07!4;UBERON:0004808!9.11e-07!4;UBERON:0001277!9.11e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;6.65e-72;11!UBERON:0006947;1.71e-66;3!UBERON:0004054;1.71e-66;3!UBERON:0001301;1.46e-50;1!UBERON:0001000;2.42e-50;1!UBERON:0005352;2.42e-50;1!UBERON:0005904;3.11e-50;4!UBERON:0003101;1.49e-36;22!UBERON:0000079;1.49e-36;22!UBERON:0000473;1.43e-25;8!UBERON:0000058;6.99e-21;10!UBERON:0003133;5.78e-13;44!UBERON:0004175;1.53e-10;21!UBERON:0000991;1.86e-10;21!UBERON:0005156;6.38e-09;59!UBERON:0000990;6.38e-09;59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,6.65e-72,11;UBERON:0006947,1.71e-66,3;UBERON:0004054,1.71e-66,3;UBERON:0001301,1.46e-50,1;UBERON:0001000,2.42e-50,1;UBERON:0005352,2.42e-50,1;UBERON:0005904,3.11e-50,4;UBERON:0003101,1.49e-36,22;UBERON:0000079,1.49e-36,22;UBERON:0000473,1.43e-25,8;UBERON:0003133,2.57e-17,48;UBERON:0005156,2.92e-14,59;UBERON:0000990,2.92e-14,59;UBERON:0000058,1.55e-11,19;UBERON:0000991,1.86e-10,21;UBERON:0009196,1.86e-10,21;UBERON:0009117,1.86e-10,21;UBERON:0005564,1.86e-10,21;UBERON:0004176,4.96e-10,22;UBERON:0003886,3.82e-09,54;UBERON:0004175,5.06e-09,25;UBERON:0002553,3.42e-08,61;UBERON:0007023,8.86e-08,114;UBERON:0005103,1.49e-07,8;UBERON:0000083,1.49e-07,8;UBERON:0009201,1.49e-07,8;UBERON:0006553,1.49e-07,8;UBERON:0003074,1.49e-07,8;UBERON:0003060,1.49e-07,8;UBERON:0000080,7.48e-07,9;UBERON:0002120,7.48e-07,9;UBERON:0004875,7.48e-07,9;UBERON:0005721,7.48e-07,9;UBERON:0005754,7.48e-07,9;UBERON:0007297,7.48e-07,9 | |||
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|short_description=p3@EDDM3B | |||
}} | }} |
Latest revision as of 00:19, 19 September 2015
Short description: | p3@EDDM3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EDDM3B_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | -73bp_to_ENST00000326783, NM_022360, uc001vyd.2_5end |
EntrezGene: | EDDM3B |
HGNC: | 19223 |
UniProt: | P56851 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 6.65e-72 | 11 |
male genital duct | 1.71e-66 | 3 |
internal male genitalia | 1.71e-66 | 3 |
epididymis | 1.46e-50 | 1 |
vas deferens | 2.42e-50 | 1 |
spermatic cord | 2.42e-50 | 1 |
duct of male reproductive system | 3.11e-50 | 4 |
male organism | 1.49e-36 | 22 |
male reproductive system | 1.49e-36 | 22 |
testis | 1.43e-25 | 8 |
reproductive organ | 2.57e-17 | 48 |
reproductive structure | 2.92e-14 | 59 |
reproductive system | 2.92e-14 | 59 |
duct | 1.55e-11 | 19 |
gonad | 1.86e-10 | 21 |
indifferent external genitalia | 1.86e-10 | 21 |
indifferent gonad | 1.86e-10 | 21 |
gonad primordium | 1.86e-10 | 21 |
external genitalia | 4.96e-10 | 22 |
body cavity precursor | 3.82e-09 | 54 |
internal genitalia | 5.06e-09 | 25 |
anatomical cavity | 3.42e-08 | 61 |
adult organism | 8.86e-08 | 114 |
mesonephric epithelium | 1.49e-07 | 8 |
mesonephric tubule | 1.49e-07 | 8 |
nephric duct | 1.49e-07 | 8 |
renal duct | 1.49e-07 | 8 |
mesonephric duct | 1.49e-07 | 8 |
pronephric duct | 1.49e-07 | 8 |
mesonephros | 7.48e-07 | 9 |
pronephros | 7.48e-07 | 9 |
nephrogenic cord | 7.48e-07 | 9 |
pronephric mesoderm | 7.48e-07 | 9 |
rostral part of nephrogenic cord | 7.48e-07 | 9 |
presumptive pronephric mesoderm | 7.48e-07 | 9 |