FFCP PHASE1:Hg19::chr14:36986015..36986024,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:36986015..36986024,-
|short_description=p@chr14:36986015..36986024,-
|description=CAGE_peak_at_chr14:36986015..36986024,-
|association_with_transcript=NA
...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:36986015..36986024,- | |||
|coexpression_cluster_id=C1393 | |||
|description=CAGE_peak_at_chr14:36986015..36986024,- | |||
|id=chr14:36986015..36986024,- | |||
|ontology_enrichment_celltype=CL:0000082!3.78e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002553;2.25e-16;1!CL:0000082;4.21e-13;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.25e-16,1;CL:0000082,3.83e-13,19 | |||
|ontology_enrichment_development_v019=UBERON:0007123;5.61e-49;5!UBERON:0008947;3.34e-13;29!UBERON:0001041;9.17e-13;30 | |||
|ontology_enrichment_disease=DOID:0050615!1.49e-08!16;DOID:3905!1.92e-07!9 | |||
|ontology_enrichment_disease_v019=DOID:1324;1.67e-16;15!DOID:3112;2.25e-16;1!DOID:3905;7.37e-16;9!DOID:0050615;1.71e-15;16!DOID:3908;4.00e-13;5!DOID:1325;1.21e-09;7!DOID:3904;1.21e-09;7!DOID:3910;7.49e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,1.48e-16,15;DOID:3112,1.65e-16,1;DOID:3905,6.33e-16,9;DOID:0050615,1.52e-15,16;DOID:3908,3.65e-13,5;DOID:1325,1.09e-09,7;DOID:3904,1.09e-09,7;DOID:3910,6.94e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0008947!5.17e-20!38;UBERON:0003258!5.17e-20!38;UBERON:0000065!1.59e-19!53;UBERON:0001004!9.36e-17!72;UBERON:0002046!6.12e-14!5;UBERON:0004117!6.12e-14!5;UBERON:0007689!6.12e-14!5;UBERON:0007123!6.12e-14!5;UBERON:0003091!6.12e-14!5;UBERON:0002048!1.43e-13!22;UBERON:0000117!1.43e-13!22;UBERON:0000171!1.43e-13!22;UBERON:0000170!1.43e-13!22;UBERON:0005597!1.43e-13!22;UBERON:0000118!1.43e-13!22;UBERON:0000072!1.97e-11!46;UBERON:0001737!2.45e-10!9;UBERON:0005178!4.79e-10!34;UBERON:0002224!4.79e-10!34;UBERON:0005181!1.06e-09!35;UBERON:0000341!3.34e-09!2;UBERON:0009722!3.43e-09!11;UBERON:0007690!3.43e-09!11;UBERON:0005153!3.56e-09!37;UBERON:0004119!1.77e-08!169;UBERON:0000925!1.77e-08!169;UBERON:0006595!1.77e-08!169;UBERON:0001007!6.17e-08!155;UBERON:0001555!6.17e-08!155;UBERON:0007026!6.17e-08!155;UBERON:0005911!8.57e-08!82;UBERON:0001041!1.37e-07!98;UBERON:0004802!3.78e-07!19;UBERON:0000115!3.78e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;5.61e-49;5!UBERON:0002048;2.22e-17;22!UBERON:0000117;2.22e-17;22!UBERON:0000171;2.22e-17;22!UBERON:0000170;2.22e-17;22!UBERON:0002171;5.11e-17;1!UBERON:0006518;5.11e-17;1!UBERON:0008949;5.11e-17;1!UBERON:0000101;5.11e-17;1!UBERON:0002167;5.11e-17;1!UBERON:0004802;4.21e-13;19!UBERON:0000115;4.21e-13;19!UBERON:0004807;2.33e-11;22!UBERON:0005181;3.53e-10;35!UBERON:0005178;7.47e-10;34!UBERON:0002224;7.47e-10;34!UBERON:0000341;4.18e-09;2!UBERON:0004903;7.49e-09;2!UBERON:0002173;7.49e-09;2!UBERON:0002186;7.49e-09;2!UBERON:0002368;1.82e-07;33!UBERON:0005911;9.24e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,5.27e-49,5;UBERON:0004117,5.27e-49,5;UBERON:0007689,5.27e-49,5;UBERON:0007123,5.27e-49,5;UBERON:0003091,5.27e-49,5;UBERON:0009722,1.50e-22,11;UBERON:0007690,1.50e-22,11;UBERON:0005911,1.10e-17,82;UBERON:0002048,2.04e-17,22;UBERON:0000117,2.04e-17,22;UBERON:0000171,2.04e-17,22;UBERON:0000170,2.04e-17,22;UBERON:0005597,2.04e-17,22;UBERON:0000118,2.04e-17,22;UBERON:0002171,5.53e-17,1;UBERON:0006518,5.53e-17,1;UBERON:0008949,5.53e-17,1;UBERON:0000101,5.53e-17,1;UBERON:0002167,5.53e-17,1;UBERON:0005153,1.32e-14,37;UBERON:0008814,6.29e-14,18;UBERON:0004802,3.83e-13,19;UBERON:0000115,3.83e-13,19;UBERON:0005157,1.87e-11,47;UBERON:0005178,2.74e-11,34;UBERON:0002224,2.74e-11,34;UBERON:0005181,5.74e-11,35;UBERON:0008947,4.22e-10,38;UBERON:0003258,4.22e-10,38;UBERON:0001007,1.61e-09,145;UBERON:0001555,1.61e-09,145;UBERON:0007026,1.61e-09,145;UBERON:0000341,4.34e-09,2;UBERON:0004807,5.19e-09,28;UBERON:0004903,6.94e-09,2;UBERON:0002173,6.94e-09,2;UBERON:0002186,6.94e-09,2;UBERON:0004119,1.54e-08,160;UBERON:0000925,1.54e-08,160;UBERON:0006595,1.54e-08,160;UBERON:0000915,2.26e-07,52;UBERON:0002368,2.72e-07,35;UBERON:0000065,4.25e-07,54;UBERON:0003929,4.61e-07,54;UBERON:0001048,6.38e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,4.88460817580699,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,1.77977555204936,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.41827123283581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21760706690754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961086713109252,0.78602152549833,4.55662960881915,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46842022703881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0,1.96526301012116,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30013224972365,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,2.2644426535001,0,0,0,0,0.471353094203252,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,3.09483760902862,0,0,2.13050538903166,3.81882949668989,2.02117188958219,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,4.88460817580699,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,1.77977555204936,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.41827123283581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21760706690754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961086713109252,0.78602152549833,4.55662960881915,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46842022703881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0,1.96526301012116,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30013224972365,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,2.2644426535001,0,0,0,0,0.471353094203252,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,3.09483760902862,0,0,2.13050538903166,3.81882949668989,2.02117188958219,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr14:36986015..36986024,- | |||
}} | }} |
Latest revision as of 20:31, 24 July 2015
Short description: | p@chr14:36986015..36986024, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:36986015..36986024, - |
Coexpression cluster: | C1393_thyroid_lung_throat_Alveolar_small_nonsmall_papillary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.25e-16 | 1 |
epithelial cell of lung | 3.83e-13 | 19 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 1.48e-16 | 15 |
papillary adenocarcinoma | 1.65e-16 | 1 |
lung carcinoma | 6.33e-16 | 9 |
respiratory system cancer | 1.52e-15 | 16 |
non-small cell lung carcinoma | 3.65e-13 | 5 |
bronchus cancer | 1.09e-09 | 7 |
bronchogenic carcinoma | 1.09e-09 | 7 |
lung adenocarcinoma | 6.94e-09 | 2 |