FFCP PHASE1:Hg19::chr3:184081137..184081155,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5437 | |EntrezGene=5437 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9195 | |HGNC=9195 | ||
|TSSclassifier=strong | |||
|UniProt=C9JUA8 | |UniProt=C9JUA8 | ||
|association_with_transcript=0bp_to_ENST00000443489_5end | |association_with_transcript=0bp_to_ENST00000443489_5end | ||
|cluster_id=chr3:184081137..184081155,+ | |||
|description=CAGE_peak_2_at_POLR2H_5end | |description=CAGE_peak_2_at_POLR2H_5end | ||
|id=chr3:184081137..184081155,+ | |id=chr3:184081137..184081155,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.18e-26!254;CL:0000548!9.32e-18!679;CL:0000004!9.32e-18!679;CL:0000255!9.32e-18!679;CL:0000012!2.75e-17!682;CL:0000003!5.02e-12!722;CL:0002321!7.65e-11!248;CL:0000220!2.10e-10!246;CL:1000497!3.36e-07!18;CL:0002518!3.36e-07!18 | |ontology_enrichment_celltype=CL:0000066!3.18e-26!254;CL:0000548!9.32e-18!679;CL:0000004!9.32e-18!679;CL:0000255!9.32e-18!679;CL:0000012!2.75e-17!682;CL:0000003!5.02e-12!722;CL:0002321!7.65e-11!248;CL:0000220!2.10e-10!246;CL:1000497!3.36e-07!18;CL:0002518!3.36e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:1000497;2.33e-08;17!CL:0002518;2.33e-08;17!CL:1000449;2.30e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.05e-27,253;CL:0002321,9.21e-11,250;CL:1000497,2.43e-08,17;CL:0002518,2.43e-08,17;CL:1000449,2.38e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.73e-21!235;DOID:14566!1.44e-20!239;DOID:305!1.07e-17!106;DOID:0050687!1.66e-15!143;DOID:0050686!1.54e-09!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.86e-21,235;DOID:14566,1.47e-20,239;DOID:305,1.07e-17,106;DOID:0050687,1.69e-15,143;DOID:0050686,1.53e-09,137 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.36e-07!9;UBERON:0003104!4.64e-07!238;UBERON:0009142!4.64e-07!238;UBERON:0000072!9.99e-07!46 | |ontology_enrichment_uberon=UBERON:0001737!2.36e-07!9;UBERON:0003104!4.64e-07!238;UBERON:0009142!4.64e-07!238;UBERON:0000072!9.99e-07!46 | ||
|ontology_enrichment_uberon_v019=UBERON:0002113;1.89e-08;24!UBERON:0011143;1.89e-08;24!UBERON:0006554;5.18e-08;30!UBERON:0001008;5.18e-08;30!UBERON:0006555;2.30e-07;15!UBERON:0004819;2.30e-07;15!UBERON:0001285;2.30e-07;15!UBERON:0007684;2.30e-07;15!UBERON:0001737;2.35e-07;9!UBERON:0001557;2.35e-07;9!UBERON:0000072;9.02e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.36e-07,9;UBERON:0004211,2.38e-07,15;UBERON:0009773,2.38e-07,15;UBERON:0001231,2.38e-07,15;UBERON:0001285,2.38e-07,15;UBERON:0007684,2.38e-07,15;UBERON:0004208,2.38e-07,15;UBERON:0002113,8.55e-07,26;UBERON:0003918,8.55e-07,26;UBERON:0011143,8.55e-07,26;UBERON:0005095,8.55e-07,26;UBERON:0007687,8.55e-07,26 | |||
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| ||
|short_description=p2@POLR2H | |short_description=p2@POLR2H | ||
}} | }} |
Latest revision as of 02:21, 17 September 2015
Short description: | p2@POLR2H |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_POLR2H_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000443489_5end |
EntrezGene: | POLR2H |
HGNC: | 9195 |
UniProt: | C9JUA8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.05e-27 | 253 |
embryonic cell | 9.21e-11 | 250 |
kidney cell | 2.43e-08 | 17 |
kidney epithelial cell | 2.43e-08 | 17 |
epithelial cell of nephron | 2.38e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.36e-07 | 9 |
nephron epithelium | 2.38e-07 | 15 |
renal tubule | 2.38e-07 | 15 |
nephron tubule | 2.38e-07 | 15 |
nephron | 2.38e-07 | 15 |
uriniferous tubule | 2.38e-07 | 15 |
nephrogenic mesenchyme | 2.38e-07 | 15 |
kidney | 8.55e-07 | 26 |
kidney mesenchyme | 8.55e-07 | 26 |
upper urinary tract | 8.55e-07 | 26 |
kidney rudiment | 8.55e-07 | 26 |
kidney field | 8.55e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.86e-21 | 235 |
disease of cellular proliferation | 1.47e-20 | 239 |
carcinoma | 1.07e-17 | 106 |
cell type cancer | 1.69e-15 | 143 |
organ system cancer | 1.53e-09 | 137 |