FFCP PHASE1:Hg19::chr3:197640161..197640186,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84223 | |EntrezGene=84223 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25251 | |HGNC=25251 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_ENST00000478903,uc003fym.2_5end | |association_with_transcript=-6bp_to_ENST00000478903,uc003fym.2_5end | ||
|cluster_id=chr3:197640161..197640186,- | |||
|description=CAGE_peak_5_at_IQCG_5end | |description=CAGE_peak_5_at_IQCG_5end | ||
|id=chr3:197640161..197640186,- | |id=chr3:197640161..197640186,- | ||
|ontology_enrichment_celltype=CL:0000625!6.55e-12!11;CL:0000838!8.79e-09!52;CL:0000084!1.27e-08!25;CL:0000827!1.27e-08!25;CL:0000542!1.70e-08!53;CL:0000051!1.70e-08!53;CL:0000791!1.39e-07!18;CL:0000789!1.39e-07!18;CL:0002420!1.39e-07!18;CL:0002419!1.39e-07!18;CL:0000790!1.39e-07!18 | |ontology_enrichment_celltype=CL:0000625!6.55e-12!11;CL:0000838!8.79e-09!52;CL:0000084!1.27e-08!25;CL:0000827!1.27e-08!25;CL:0000542!1.70e-08!53;CL:0000051!1.70e-08!53;CL:0000791!1.39e-07!18;CL:0000789!1.39e-07!18;CL:0002420!1.39e-07!18;CL:0002419!1.39e-07!18;CL:0000790!1.39e-07!18 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.36e-07;10!UBERON:0005564;5.36e-07;10 | |||
|ontology_enrichment_disease=DOID:2394!1.69e-08!14 | |ontology_enrichment_disease=DOID:2394!1.69e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;5.01e-23;14!DOID:193;9.78e-13;29!DOID:120;4.05e-11;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.13e-23,14;DOID:193,8.81e-13,29;DOID:120,3.69e-11,27 | |||
|ontology_enrichment_uberon=UBERON:0002780!1.17e-31!41;UBERON:0001890!1.17e-31!41;UBERON:0006240!1.17e-31!41;UBERON:0007023!2.36e-31!115;UBERON:0003080!1.21e-30!42;UBERON:0001049!2.67e-28!57;UBERON:0005068!2.67e-28!57;UBERON:0006241!2.67e-28!57;UBERON:0007135!2.67e-28!57;UBERON:0002616!6.58e-27!59;UBERON:0001893!3.76e-26!34;UBERON:0002791!5.47e-25!33;UBERON:0000955!1.14e-24!69;UBERON:0006238!1.14e-24!69;UBERON:0001869!1.95e-24!32;UBERON:0002020!4.04e-24!34;UBERON:0003528!4.04e-24!34;UBERON:0005743!6.76e-24!86;UBERON:0001017!2.06e-23!82;UBERON:0003075!7.64e-23!86;UBERON:0007284!7.64e-23!86;UBERON:0003056!1.45e-22!61;UBERON:0002346!3.50e-21!90;UBERON:0000073!2.90e-20!94;UBERON:0001016!2.90e-20!94;UBERON:0000956!4.54e-19!25;UBERON:0000203!4.54e-19!25;UBERON:0002619!2.25e-18!22;UBERON:0001950!4.66e-16!20;UBERON:0000992!2.48e-14!13;UBERON:0000153!3.26e-14!129;UBERON:0007811!3.26e-14!129;UBERON:0004176!3.32e-14!22;UBERON:0000033!2.34e-13!123;UBERON:0000991!5.03e-13!21;UBERON:0009196!5.03e-13!21;UBERON:0009117!5.03e-13!21;UBERON:0005564!5.03e-13!21;UBERON:0004121!5.53e-10!169;UBERON:0000924!1.97e-09!173;UBERON:0006601!1.97e-09!173;UBERON:0003133!4.88e-09!48;UBERON:0000200!5.90e-09!6;UBERON:0002118!9.85e-09!5;UBERON:0004532!9.85e-09!5;UBERON:0002119!1.39e-07!4;UBERON:0004531!1.39e-07!4;UBERON:0005156!1.50e-07!59;UBERON:0000990!1.50e-07!59;UBERON:0003134!2.55e-07!37;UBERON:0000474!2.55e-07!37;UBERON:0002323!2.90e-07!46;UBERON:0001894!6.90e-07!7;UBERON:0006222!6.90e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;1.81e-37;13!UBERON:0000991;1.32e-36;21!UBERON:0002118;9.93e-21;5!UBERON:0002119;8.68e-18;4!UBERON:0003100;1.02e-16;41!UBERON:0000474;1.18e-16;37!UBERON:0003134;4.01e-16;33!UBERON:0003133;3.03e-14;44!UBERON:0001870;1.38e-12;3!UBERON:0002619;3.67e-12;22!UBERON:0001950;1.10e-10;20!UBERON:0000956;1.40e-10;25!UBERON:0000203;1.40e-10;25!UBERON:0002702;3.98e-09;2!UBERON:0002791;7.53e-09;32!UBERON:0002323;9.01e-09;45!UBERON:0001869;1.66e-08;32!UBERON:0003528;2.07e-08;34!UBERON:0002020;2.07e-08;34!UBERON:0002553;8.66e-08;52!UBERON:0005156;9.72e-08;59!UBERON:0000990;9.72e-08;59!UBERON:0001893;1.08e-07;34!UBERON:0004458;1.32e-07;48!UBERON:0002780;6.77e-07;41!UBERON:0001890;6.77e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004176,5.34e-40,22;UBERON:0000992,1.35e-37,13;UBERON:0000991,1.08e-36,21;UBERON:0009196,1.08e-36,21;UBERON:0009117,1.08e-36,21;UBERON:0005564,1.08e-36,21;UBERON:0003133,5.22e-24,48;UBERON:0003134,5.27e-22,37;UBERON:0000474,5.27e-22,37;UBERON:0002118,7.17e-21,5;UBERON:0003100,1.65e-19,41;UBERON:0005156,1.05e-18,59;UBERON:0000990,1.05e-18,59;UBERON:0002119,8.89e-18,4;UBERON:0002323,6.08e-15,46;UBERON:0004458,7.90e-14,49;UBERON:0001870,1.53e-12,3;UBERON:0003886,2.99e-12,54;UBERON:0002619,3.73e-12,22;UBERON:0001950,1.15e-10,20;UBERON:0000956,1.42e-10,25;UBERON:0000203,1.42e-10,25;UBERON:0002553,1.76e-10,61;UBERON:0002791,6.29e-10,32;UBERON:0001869,6.29e-10,32;UBERON:0003528,2.95e-09,34;UBERON:0002020,2.95e-09,34;UBERON:0001893,2.95e-09,34;UBERON:0002702,3.67e-09,2;UBERON:0002780,5.29e-09,41;UBERON:0001890,5.29e-09,41;UBERON:0003080,5.29e-09,41;UBERON:0006240,5.29e-09,41 | |||
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| ||
|short_description=p5@IQCG | |short_description=p5@IQCG | ||
}} | }} |
Latest revision as of 17:36, 17 September 2015
Short description: | p5@IQCG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_IQCG_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000478903, uc003fym.2_5end |
EntrezGene: | IQCG |
HGNC: | 25251 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
external genitalia | 5.34e-40 | 22 |
female gonad | 1.35e-37 | 13 |
gonad | 1.08e-36 | 21 |
indifferent external genitalia | 1.08e-36 | 21 |
indifferent gonad | 1.08e-36 | 21 |
gonad primordium | 1.08e-36 | 21 |
reproductive organ | 5.22e-24 | 48 |
female reproductive organ | 5.27e-22 | 37 |
female reproductive system | 5.27e-22 | 37 |
right ovary | 7.17e-21 | 5 |
female organism | 1.65e-19 | 41 |
reproductive structure | 1.05e-18 | 59 |
reproductive system | 1.05e-18 | 59 |
left ovary | 8.89e-18 | 4 |
body cavity | 6.08e-15 | 46 |
body cavity or lining | 7.90e-14 | 49 |
frontal cortex | 1.53e-12 | 3 |
body cavity precursor | 2.99e-12 | 54 |
regional part of cerebral cortex | 3.73e-12 | 22 |
neocortex | 1.15e-10 | 20 |
cerebral cortex | 1.42e-10 | 25 |
pallium | 1.42e-10 | 25 |
anatomical cavity | 1.76e-10 | 61 |
regional part of telencephalon | 6.29e-10 | 32 |
cerebral hemisphere | 6.29e-10 | 32 |
brain grey matter | 2.95e-09 | 34 |
gray matter | 2.95e-09 | 34 |
telencephalon | 2.95e-09 | 34 |
middle frontal gyrus | 3.67e-09 | 2 |
regional part of forebrain | 5.29e-09 | 41 |
forebrain | 5.29e-09 | 41 |
anterior neural tube | 5.29e-09 | 41 |
future forebrain | 5.29e-09 | 41 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.13e-23 | 14 |
reproductive organ cancer | 8.81e-13 | 29 |
female reproductive organ cancer | 3.69e-11 | 27 |