FFCP PHASE1:Hg19::chr4:2794750..2794781,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6452 | |EntrezGene=6452 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10825 | |HGNC=10825 | ||
|TSSclassifier=strong | |||
|UniProt=P78314 | |UniProt=P78314 | ||
|association_with_transcript=0bp_to_ENST00000389838,ENST00000452765,NM_001122681,uc003gfi.3,uc010icn.2_5end | |association_with_transcript=0bp_to_ENST00000389838,ENST00000452765,NM_001122681,uc003gfi.3,uc010icn.2_5end | ||
|cluster_id=chr4:2794750..2794781,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_3_at_SH3BP2_5end | |description=CAGE_peak_3_at_SH3BP2_5end | ||
|id=chr4:2794750..2794781,+ | |id=chr4:2794750..2794781,+ | ||
|ontology_enrichment_celltype=CL:0000766!2.81e-32!76;CL:0000557!1.46e-28!71;CL:0002009!8.50e-28!65;CL:0002057!2.69e-27!42;CL:0002194!5.05e-27!63;CL:0000576!5.05e-27!63;CL:0000040!5.05e-27!63;CL:0000559!5.05e-27!63;CL:0000860!3.94e-25!45;CL:0000839!3.98e-25!70;CL:0000763!5.53e-16!112;CL:0000049!5.53e-16!112;CL:0000738!5.60e-11!140;CL:0002087!9.55e-09!119;CL:0002031!2.10e-08!124;CL:0002393!9.68e-07!9;CL:0002397!9.68e-07!9 | |ontology_enrichment_celltype=CL:0000766!2.81e-32!76;CL:0000557!1.46e-28!71;CL:0002009!8.50e-28!65;CL:0002057!2.69e-27!42;CL:0002194!5.05e-27!63;CL:0000576!5.05e-27!63;CL:0000040!5.05e-27!63;CL:0000559!5.05e-27!63;CL:0000860!3.94e-25!45;CL:0000839!3.98e-25!70;CL:0000763!5.53e-16!112;CL:0000049!5.53e-16!112;CL:0000738!5.60e-11!140;CL:0002087!9.55e-09!119;CL:0002031!2.10e-08!124;CL:0002393!9.68e-07!9;CL:0002397!9.68e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.45e-20;33!CL:0002057;1.45e-20;33!CL:0000473;3.06e-20;39!CL:0000234;3.06e-20;39!CL:0000576;6.88e-18;48!CL:0000766;4.34e-15;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.89e-35,72;CL:0000473,3.48e-31,48;CL:0000234,3.48e-31,48;CL:0000557,7.22e-31,67;CL:0002009,3.27e-30,61;CL:0002194,1.95e-29,59;CL:0000576,1.95e-29,59;CL:0000040,1.95e-29,59;CL:0000559,1.95e-29,59;CL:0000860,1.08e-27,42;CL:0002057,1.08e-27,42;CL:0000839,1.47e-27,66;CL:0000763,2.06e-17,108;CL:0000049,2.06e-17,108;CL:0000738,1.29e-12,136;CL:0002087,3.51e-10,115;CL:0002031,6.21e-10,120;CL:0000988,2.49e-07,177;CL:0002032,4.52e-07,161;CL:0000837,4.52e-07,161;CL:0002393,8.05e-07,9;CL:0002397,8.05e-07,9;CL:0000037,9.77e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;2.64e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.56e-27!102;UBERON:0003061!1.56e-27!102;UBERON:0002371!4.74e-26!80;UBERON:0002193!2.51e-25!112;UBERON:0001474!1.11e-24!86;UBERON:0002405!1.11e-23!115;UBERON:0004765!1.02e-17!101;UBERON:0001434!1.02e-17!101;UBERON:0000062!2.10e-10!511;UBERON:0003081!5.30e-10!216;UBERON:0007023!1.00e-09!115;UBERON:0000467!1.29e-09!625;UBERON:0000480!1.40e-09!626;UBERON:0002050!2.07e-09!605;UBERON:0005423!2.07e-09!605;UBERON:0000922!2.56e-09!612;UBERON:0000923!2.63e-09!604;UBERON:0005291!2.63e-09!604;UBERON:0006598!2.63e-09!604;UBERON:0002532!2.63e-09!604;UBERON:0000468!5.30e-08!659;UBERON:0002616!6.60e-08!59;UBERON:0001049!7.24e-08!57;UBERON:0005068!7.24e-08!57;UBERON:0006241!7.24e-08!57;UBERON:0007135!7.24e-08!57;UBERON:0000955!1.90e-07!69;UBERON:0006238!1.90e-07!69;UBERON:0000479!3.53e-07!787;UBERON:0001017!4.44e-07!82 | |ontology_enrichment_uberon=UBERON:0002390!1.56e-27!102;UBERON:0003061!1.56e-27!102;UBERON:0002371!4.74e-26!80;UBERON:0002193!2.51e-25!112;UBERON:0001474!1.11e-24!86;UBERON:0002405!1.11e-23!115;UBERON:0004765!1.02e-17!101;UBERON:0001434!1.02e-17!101;UBERON:0000062!2.10e-10!511;UBERON:0003081!5.30e-10!216;UBERON:0007023!1.00e-09!115;UBERON:0000467!1.29e-09!625;UBERON:0000480!1.40e-09!626;UBERON:0002050!2.07e-09!605;UBERON:0005423!2.07e-09!605;UBERON:0000922!2.56e-09!612;UBERON:0000923!2.63e-09!604;UBERON:0005291!2.63e-09!604;UBERON:0006598!2.63e-09!604;UBERON:0002532!2.63e-09!604;UBERON:0000468!5.30e-08!659;UBERON:0002616!6.60e-08!59;UBERON:0001049!7.24e-08!57;UBERON:0005068!7.24e-08!57;UBERON:0006241!7.24e-08!57;UBERON:0007135!7.24e-08!57;UBERON:0000955!1.90e-07!69;UBERON:0006238!1.90e-07!69;UBERON:0000479!3.53e-07!787;UBERON:0001017!4.44e-07!82 | ||
|ontology_enrichment_uberon_v019= | |||
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| ||
|short_description=p3@SH3BP2 | |short_description=p3@SH3BP2 | ||
}} | }} |
Latest revision as of 12:13, 17 September 2015
Short description: | p3@SH3BP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SH3BP2_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000389838, ENST00000452765, NM_001122681, uc003gfi.3, uc010icn.2_5end |
EntrezGene: | SH3BP2 |
HGNC: | 10825 |
UniProt: | P78314 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 9.89e-35 | 72 |
defensive cell | 3.48e-31 | 48 |
phagocyte | 3.48e-31 | 48 |
granulocyte monocyte progenitor cell | 7.22e-31 | 67 |
macrophage dendritic cell progenitor | 3.27e-30 | 61 |
monopoietic cell | 1.95e-29 | 59 |
monocyte | 1.95e-29 | 59 |
monoblast | 1.95e-29 | 59 |
promonocyte | 1.95e-29 | 59 |
classical monocyte | 1.08e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.08e-27 | 42 |
myeloid lineage restricted progenitor cell | 1.47e-27 | 66 |
myeloid cell | 2.06e-17 | 108 |
common myeloid progenitor | 2.06e-17 | 108 |
leukocyte | 1.29e-12 | 136 |
nongranular leukocyte | 3.51e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 6.21e-10 | 120 |
hematopoietic cell | 2.49e-07 | 177 |
hematopoietic oligopotent progenitor cell | 4.52e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.52e-07 | 161 |
intermediate monocyte | 8.05e-07 | 9 |
CD14-positive, CD16-positive monocyte | 8.05e-07 | 9 |
hematopoietic stem cell | 9.77e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.54e-29 | 98 |
blood island | 5.54e-29 | 98 |
bone marrow | 5.79e-28 | 76 |
hemolymphoid system | 2.00e-26 | 108 |
bone element | 4.03e-26 | 82 |
skeletal element | 6.28e-24 | 90 |
immune system | 9.05e-23 | 93 |
skeletal system | 9.30e-19 | 100 |
adult organism | 1.37e-09 | 114 |
lateral plate mesoderm | 2.41e-09 | 203 |
embryo | 1.58e-08 | 592 |
neural tube | 9.92e-08 | 56 |
neural rod | 9.92e-08 | 56 |
future spinal cord | 9.92e-08 | 56 |
neural keel | 9.92e-08 | 56 |
developing anatomical structure | 1.17e-07 | 581 |
germ layer | 2.53e-07 | 560 |
germ layer / neural crest | 2.53e-07 | 560 |
embryonic tissue | 2.53e-07 | 560 |
presumptive structure | 2.53e-07 | 560 |
germ layer / neural crest derived structure | 2.53e-07 | 560 |
epiblast (generic) | 2.53e-07 | 560 |
brain | 2.57e-07 | 68 |
future brain | 2.57e-07 | 68 |
regional part of nervous system | 6.32e-07 | 53 |
regional part of brain | 6.32e-07 | 53 |
embryonic structure | 8.08e-07 | 564 |
central nervous system | 9.66e-07 | 81 |