FFCP PHASE1:Hg19::chr4:103747011..103747024,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7323 | |EntrezGene=7323 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12476 | |HGNC=12476 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000350435_5end | |association_with_transcript=0bp_to_ENST00000350435_5end | ||
|cluster_id=chr4:103747011..103747024,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_20_at_UBE2D3_5end | |description=CAGE_peak_20_at_UBE2D3_5end | ||
|id=chr4:103747011..103747024,- | |id=chr4:103747011..103747024,- | ||
|ontology_enrichment_celltype=CL:0000766!4.72e-31!76;CL:0000738!1.29e-30!140;CL:0002057!8.38e-28!42;CL:0000839!9.62e-27!70;CL:0002009!2.11e-26!65;CL:0000557!6.99e-26!71;CL:0000037!2.89e-25!172;CL:0000566!2.89e-25!172;CL:0002194!3.46e-25!63;CL:0000576!3.46e-25!63;CL:0000040!3.46e-25!63;CL:0000559!3.46e-25!63;CL:0000763!7.16e-25!112;CL:0000049!7.16e-25!112;CL:0002031!2.31e-24!124;CL:0000988!2.91e-24!182;CL:0000860!4.09e-24!45;CL:0002032!7.10e-24!165;CL:0000837!7.10e-24!165;CL:0000134!6.91e-23!358;CL:0002087!2.62e-22!119;CL:0002320!6.15e-22!365;CL:0000048!5.74e-20!430;CL:0000723!1.26e-18!436;CL:0000034!9.49e-18!444;CL:0000219!4.63e-17!390;CL:0002371!1.23e-09!591;CL:0000003!1.86e-08!722;CL:0000144!7.90e-08!625;CL:0000094!4.27e-07!8;CL:0000063!9.88e-07!578 | |ontology_enrichment_celltype=CL:0000766!4.72e-31!76;CL:0000738!1.29e-30!140;CL:0002057!8.38e-28!42;CL:0000839!9.62e-27!70;CL:0002009!2.11e-26!65;CL:0000557!6.99e-26!71;CL:0000037!2.89e-25!172;CL:0000566!2.89e-25!172;CL:0002194!3.46e-25!63;CL:0000576!3.46e-25!63;CL:0000040!3.46e-25!63;CL:0000559!3.46e-25!63;CL:0000763!7.16e-25!112;CL:0000049!7.16e-25!112;CL:0002031!2.31e-24!124;CL:0000988!2.91e-24!182;CL:0000860!4.09e-24!45;CL:0002032!7.10e-24!165;CL:0000837!7.10e-24!165;CL:0000134!6.91e-23!358;CL:0002087!2.62e-22!119;CL:0002320!6.15e-22!365;CL:0000048!5.74e-20!430;CL:0000723!1.26e-18!436;CL:0000034!9.49e-18!444;CL:0000219!4.63e-17!390;CL:0002371!1.23e-09!591;CL:0000003!1.86e-08!722;CL:0000144!7.90e-08!625;CL:0000094!4.27e-07!8;CL:0000063!9.88e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.98e-42;33!CL:0002057;4.98e-42;33!CL:0000576;5.25e-33;48!CL:0000473;2.16e-32;39!CL:0000234;2.16e-32;39!CL:0000766;1.67e-26;69!CL:0000094;3.54e-13;8!CL:0000738;3.63e-11;136!CL:0000763;1.09e-10;100!CL:0000990;1.60e-09;8!CL:0000081;5.11e-09;11!CL:0002087;5.59e-09;104!CL:0002393;2.57e-08;6!CL:0002397;2.57e-08;6!CL:0000453;5.57e-08;5!CL:0000451;1.77e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.72e-61,72;CL:0000860,1.76e-57,42;CL:0002057,1.76e-57,42;CL:0000473,2.75e-53,48;CL:0000234,2.75e-53,48;CL:0002009,1.57e-52,61;CL:0000839,1.37e-51,66;CL:0000557,1.39e-50,67;CL:0002194,6.17e-50,59;CL:0000576,6.17e-50,59;CL:0000040,6.17e-50,59;CL:0000559,6.17e-50,59;CL:0000763,1.69e-45,108;CL:0000049,1.69e-45,108;CL:0000738,1.89e-41,136;CL:0000037,1.59e-31,168;CL:0000988,8.26e-31,177;CL:0002031,8.63e-31,120;CL:0002032,1.44e-30,161;CL:0000837,1.44e-30,161;CL:0002087,1.72e-28,115;CL:0000134,1.19e-19,354;CL:0002320,1.03e-18,361;CL:0000048,2.38e-16,427;CL:0000723,1.05e-15,433;CL:0000219,1.94e-15,386;CL:0000034,2.07e-15,441;CL:0000094,2.60e-13,8;CL:0002393,4.79e-12,9;CL:0002397,4.79e-12,9;CL:0000990,8.60e-10,8;CL:0000081,4.13e-09,11;CL:0000453,4.26e-08,5;CL:0000451,1.09e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;6.58e-41;42!CL:0000049;1.40e-12;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.42e-30!102;UBERON:0003061!1.42e-30!102;UBERON:0002193!1.24e-27!112;UBERON:0002371!4.51e-21!80;UBERON:0002384!9.88e-21!375;UBERON:0001474!1.23e-18!86;UBERON:0004765!6.09e-16!101;UBERON:0001434!6.09e-16!101;UBERON:0003081!5.86e-13!216;UBERON:0002405!1.16e-12!115;UBERON:0002204!8.73e-12!167;UBERON:0000178!3.34e-10!15;UBERON:0000179!3.34e-10!15;UBERON:0000463!3.34e-10!15 | |ontology_enrichment_uberon=UBERON:0002390!1.42e-30!102;UBERON:0003061!1.42e-30!102;UBERON:0002193!1.24e-27!112;UBERON:0002371!4.51e-21!80;UBERON:0002384!9.88e-21!375;UBERON:0001474!1.23e-18!86;UBERON:0004765!6.09e-16!101;UBERON:0001434!6.09e-16!101;UBERON:0003081!5.86e-13!216;UBERON:0002405!1.16e-12!115;UBERON:0002204!8.73e-12!167;UBERON:0000178!3.34e-10!15;UBERON:0000179!3.34e-10!15;UBERON:0000463!3.34e-10!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.23e-18;15!UBERON:0000179;7.23e-18;15!UBERON:0000463;7.23e-18;15 | |||
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| ||
|short_description=p20@UBE2D3 | |short_description=p20@UBE2D3 | ||
}} | }} |
Latest revision as of 04:47, 20 September 2015
Short description: | p20@UBE2D3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_UBE2D3_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000350435_5end |
EntrezGene: | UBE2D3 |
HGNC: | 12476 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.52e-53 | 98 |
blood island | 1.52e-53 | 98 |
hemolymphoid system | 2.93e-48 | 108 |
bone marrow | 1.66e-42 | 76 |
bone element | 4.09e-38 | 82 |
skeletal element | 1.23e-34 | 90 |
immune system | 4.72e-33 | 93 |
skeletal system | 8.11e-31 | 100 |
lateral plate mesoderm | 1.76e-24 | 203 |
musculoskeletal system | 4.73e-20 | 167 |
blood | 4.16e-18 | 15 |
haemolymphatic fluid | 4.16e-18 | 15 |
organism substance | 4.16e-18 | 15 |
connective tissue | 1.94e-17 | 371 |
mesoderm | 1.06e-12 | 315 |
mesoderm-derived structure | 1.06e-12 | 315 |
presumptive mesoderm | 1.06e-12 | 315 |