FFCP PHASE1:Hg19::chrX:148561600..148561610,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3423 | |EntrezGene=3423 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5389 | |HGNC=5389 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=435bp_to_AL117536_5end | |association_with_transcript=435bp_to_AL117536_5end | ||
|cluster_id=chrX:148561600..148561610,- | |||
|description=CAGE_peak_36_at_IDS_5end | |description=CAGE_peak_36_at_IDS_5end | ||
|id=chrX:148561600..148561610,- | |id=chrX:148561600..148561610,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002231;3.89e-23;3!CL:0000047;7.97e-10;2!CL:0000214;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,3.29e-23,3;CL:0000214,6.88e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!1.71e-17!22;UBERON:0002020!8.11e-17!34;UBERON:0003528!8.11e-17!34;UBERON:0001869!2.36e-16!32;UBERON:0001893!5.02e-15!34;UBERON:0000956!8.10e-15!25;UBERON:0000203!8.10e-15!25;UBERON:0001950!1.01e-14!20;UBERON:0002791!2.48e-14!33;UBERON:0001049!5.19e-14!57;UBERON:0005068!5.19e-14!57;UBERON:0006241!5.19e-14!57;UBERON:0007135!5.19e-14!57;UBERON:0002780!6.73e-14!41;UBERON:0001890!6.73e-14!41;UBERON:0006240!6.73e-14!41;UBERON:0003080!2.09e-13!42;UBERON:0002616!3.00e-13!59;UBERON:0000955!1.07e-11!69;UBERON:0006238!1.07e-11!69;UBERON:0001017!3.79e-11!82;UBERON:0005743!4.50e-11!86;UBERON:0000073!7.68e-10!94;UBERON:0001016!7.68e-10!94;UBERON:0001871!2.68e-09!7;UBERON:0003056!7.79e-09!61;UBERON:0003075!1.16e-08!86;UBERON:0007284!1.16e-08!86;UBERON:0000349!1.99e-08!5;UBERON:0002346!6.51e-08!90;UBERON:0000033!9.22e-08!123;UBERON:0007023!2.93e-07!115;UBERON:0000153!5.85e-07!129;UBERON:0007811!5.85e-07!129 | |ontology_enrichment_uberon=UBERON:0002619!1.71e-17!22;UBERON:0002020!8.11e-17!34;UBERON:0003528!8.11e-17!34;UBERON:0001869!2.36e-16!32;UBERON:0001893!5.02e-15!34;UBERON:0000956!8.10e-15!25;UBERON:0000203!8.10e-15!25;UBERON:0001950!1.01e-14!20;UBERON:0002791!2.48e-14!33;UBERON:0001049!5.19e-14!57;UBERON:0005068!5.19e-14!57;UBERON:0006241!5.19e-14!57;UBERON:0007135!5.19e-14!57;UBERON:0002780!6.73e-14!41;UBERON:0001890!6.73e-14!41;UBERON:0006240!6.73e-14!41;UBERON:0003080!2.09e-13!42;UBERON:0002616!3.00e-13!59;UBERON:0000955!1.07e-11!69;UBERON:0006238!1.07e-11!69;UBERON:0001017!3.79e-11!82;UBERON:0005743!4.50e-11!86;UBERON:0000073!7.68e-10!94;UBERON:0001016!7.68e-10!94;UBERON:0001871!2.68e-09!7;UBERON:0003056!7.79e-09!61;UBERON:0003075!1.16e-08!86;UBERON:0007284!1.16e-08!86;UBERON:0000349!1.99e-08!5;UBERON:0002346!6.51e-08!90;UBERON:0000033!9.22e-08!123;UBERON:0007023!2.93e-07!115;UBERON:0000153!5.85e-07!129;UBERON:0007811!5.85e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0001954;3.93e-34;2!UBERON:0003022;3.93e-34;2!UBERON:0002421;3.93e-34;2!UBERON:0002600;3.93e-34;2!UBERON:0000349;2.22e-30;5!UBERON:0002619;7.56e-12;22!UBERON:0000956;1.62e-10;25!UBERON:0000203;1.62e-10;25!UBERON:0001871;2.24e-10;6!UBERON:0002771;1.44e-09;2!UBERON:0001876;1.44e-09;2!UBERON:0003528;2.38e-07;34!UBERON:0002020;2.38e-07;34!UBERON:0002791;3.32e-07;32!UBERON:0001869;3.32e-07;32!UBERON:0002367;5.39e-07;11!UBERON:0010147;5.39e-07;11!UBERON:0006915;8.62e-07;3!UBERON:0007616;8.62e-07;3!UBERON:0002217;8.62e-07;3!UBERON:0002018;8.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,3.06e-34,2;UBERON:0003022,3.06e-34,2;UBERON:0002421,3.06e-34,2;UBERON:0002600,3.06e-34,2;UBERON:0000349,2.59e-30,5;UBERON:0002619,7.89e-12,22;UBERON:0000956,1.68e-10,25;UBERON:0000203,1.68e-10,25;UBERON:0001871,2.58e-10,6;UBERON:0002771,1.44e-09,2;UBERON:0001876,1.86e-09,2;UBERON:0002791,2.48e-08,32;UBERON:0001869,2.48e-08,32;UBERON:0003528,7.19e-08,34;UBERON:0002020,7.19e-08,34;UBERON:0001893,7.19e-08,34;UBERON:0002367,5.15e-07,11;UBERON:0010147,5.15e-07,11;UBERON:0009846,5.15e-07,11;UBERON:0003353,5.15e-07,11;UBERON:0004902,5.15e-07,11;UBERON:0003820,5.15e-07,11;UBERON:0009847,5.15e-07,11;UBERON:0006915,6.88e-07,3;UBERON:0007616,6.88e-07,3;UBERON:0002217,6.88e-07,3;UBERON:0002018,6.88e-07,3 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0,0,0,0,0,0,0,0,0.545812300115692,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.144846518960824,0.795285947051099,0.973269740605272,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0,0,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.379891534993739,0,0,1.41867352879343,0,0,0,0,0,0,0,0,0.234321431833797,0.312160076830321,0,0.149448680551801,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194874010322397,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425325291727159,0,0,0,0,0,0.414656231081544,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,1.14861935834114,0,0,0,0,0,0,0.215627574859517,0.385029108839245,3.55732473911449,0,0,0.167516265334349,0,0.749007023947182,0,0,0,0,0,0,0,0.157702415033935,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0.164254312027618,0,0,0.241718899183244,1.40354529212299,2.20994373446151,0.114814448164607,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0.48335359146061,0,0,0,0,0,0,0,0.165284915360978,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0,0,0.143411352204052,0,0,0,0.633322905892992,1.97576935775941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0.994147647766298,1.1253553312841,0.222617410045812,0,0,0,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.482385754501632,0,0,0.591095237907095,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,2.38568906942791,1.36203406111576,0,0,0.415440338029185,0.2249738915515,0,0.0607495566580247,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0.653174720218818,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0.314108192500469,0,0.488105059607853,0.751145584238999,0,0.110929051536852,0.124192805882767,0,0,0.151649117541648,0,0,0,0,0,0,0,0.378806010550178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537266523244462,0,0,0.176689145945881,0,0.337884881306145,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.798169295285756,0.205116364240755,0.252071696221718,0,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0.198916222116275,0,0,0.781514011233092,0,0.163771917510097,0.147856086217045,0.0675375846183947,0.781078098613847,0.413373593002368,0.0634158101939068,0.546974809018219,0,0.496211178389294,0,0,0,0.336283722218824,0,0,0,0,0,0.0679697329768317,0,0,0,0,0.628462359664008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0.240724100067505,0.730336388246517,0.458729283404541,0,0,0.0679914901909147,0.436350690340377,0,0,0.462175628631418,0,0.126166424835079,0,0.886889507080059,0.101988829741982,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0.533636729388577,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0,0,0,0,0,0,0,0,0.545812300115692,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.144846518960824,0.795285947051099,0.973269740605272,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0,0,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.379891534993739,0,0,1.41867352879343,0,0,0,0,0,0,0,0,0.234321431833797,0.312160076830321,0,0.149448680551801,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194874010322397,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425325291727159,0,0,0,0,0,0.414656231081544,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,1.14861935834114,0,0,0,0,0,0,0.215627574859517,0.385029108839245,3.55732473911449,0,0,0.167516265334349,0,0.749007023947182,0,0,0,0,0,0,0,0.157702415033935,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0.164254312027618,0,0,0.241718899183244,1.40354529212299,2.20994373446151,0.114814448164607,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0.48335359146061,0,0,0,0,0,0,0,0.165284915360978,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0,0,0.143411352204052,0,0,0,0.633322905892992,1.97576935775941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0.994147647766298,1.1253553312841,0.222617410045812,0,0,0,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.482385754501632,0,0,0.591095237907095,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,2.38568906942791,1.36203406111576,0,0,0.415440338029185,0.2249738915515,0,0.0607495566580247,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0.653174720218818,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0.314108192500469,0,0.488105059607853,0.751145584238999,0,0.110929051536852,0.124192805882767,0,0,0.151649117541648,0,0,0,0,0,0,0,0.378806010550178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537266523244462,0,0,0.176689145945881,0,0.337884881306145,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.798169295285756,0.205116364240755,0.252071696221718,0,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0.198916222116275,0,0,0.781514011233092,0,0.163771917510097,0.147856086217045,0.0675375846183947,0.781078098613847,0.413373593002368,0.0634158101939068,0.546974809018219,0,0.496211178389294,0,0,0,0.336283722218824,0,0,0,0,0,0.0679697329768317,0,0,0,0,0.628462359664008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0.240724100067505,0.730336388246517,0.458729283404541,0,0,0.0679914901909147,0.436350690340377,0,0,0.462175628631418,0,0.126166424835079,0,0.886889507080059,0.101988829741982,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0.533636729388577,0,0,0,0,0,0,0,0 | ||
|short_description=p36@IDS | |short_description=p36@IDS | ||
}} | }} |
Latest revision as of 20:54, 19 September 2015
Short description: | p36@IDS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_36_at_IDS_5end |
Coexpression cluster: | NA |
Association with transcript: | 435bp_to_AL117536_5end |
EntrezGene: | IDS |
HGNC: | 5389 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 3.29e-23 | 3 |
synovial cell | 6.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 3.06e-34 | 2 |
lobe parts of cerebral cortex | 3.06e-34 | 2 |
hippocampal formation | 3.06e-34 | 2 |
limbic lobe | 3.06e-34 | 2 |
limbic system | 2.59e-30 | 5 |
regional part of cerebral cortex | 7.89e-12 | 22 |
cerebral cortex | 1.68e-10 | 25 |
pallium | 1.68e-10 | 25 |
temporal lobe | 2.58e-10 | 6 |
middle temporal gyrus | 1.44e-09 | 2 |
amygdala | 1.86e-09 | 2 |
regional part of telencephalon | 2.48e-08 | 32 |
cerebral hemisphere | 2.48e-08 | 32 |
brain grey matter | 7.19e-08 | 34 |
gray matter | 7.19e-08 | 34 |
telencephalon | 7.19e-08 | 34 |
prostate gland | 5.15e-07 | 11 |
male accessory sex gland | 5.15e-07 | 11 |
embryonic cloacal epithelium | 5.15e-07 | 11 |
epithelium of hindgut | 5.15e-07 | 11 |
urogenital sinus epithelium | 5.15e-07 | 11 |
prostate bud | 5.15e-07 | 11 |
prostate field | 5.15e-07 | 11 |
stratified squamous epithelium | 6.88e-07 | 3 |
layer of synovial tissue | 6.88e-07 | 3 |
synovial joint | 6.88e-07 | 3 |
synovial membrane of synovial joint | 6.88e-07 | 3 |