FFCP PHASE1:Hg19::chr1:200644175..200644191,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:200644175..200644191,+ | |||
|coexpression_cluster_id=C2406 | |||
|description=CAGE_peak_at_chr1:200644175..200644191,+ | |description=CAGE_peak_at_chr1:200644175..200644191,+ | ||
|id=chr1:200644175..200644191,+ | |id=chr1:200644175..200644191,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.16e-31!43;CL:0000223!5.07e-25!59;CL:0000066!1.11e-22!254;CL:0002251!2.88e-20!21;CL:0002159!1.37e-19!13;CL:0002368!5.76e-16!13;CL:0000076!7.31e-12!62;CL:0000244!2.87e-11!4;CL:0000731!2.87e-11!4;CL:0002077!4.74e-11!33;CL:0000068!6.13e-09!3;CL:0000069!6.13e-09!3;CL:0000307!6.13e-09!3;CL:0000377!6.13e-09!3;CL:0000622!9.60e-09!5;CL:0000362!1.11e-08!8;CL:0002166!1.27e-08!3;CL:0002621!5.14e-08!3;CL:0000220!8.32e-08!246;CL:0000240!1.08e-07!6;CL:0000311!1.08e-07!6;CL:0000079!1.08e-07!6;CL:0000237!1.08e-07!6;CL:0000036!1.08e-07!6;CL:0000357!1.08e-07!6;CL:0000114!1.08e-07!6;CL:0002321!1.15e-07!248;CL:0002202!1.39e-07!9;CL:0002632!1.39e-07!9;CL:0000154!2.82e-07!6;CL:0000150!5.41e-07!9;CL:0000575!9.01e-07!2;CL:0002327!9.59e-07!4 | |ontology_enrichment_celltype=CL:0002076!1.16e-31!43;CL:0000223!5.07e-25!59;CL:0000066!1.11e-22!254;CL:0002251!2.88e-20!21;CL:0002159!1.37e-19!13;CL:0002368!5.76e-16!13;CL:0000076!7.31e-12!62;CL:0000244!2.87e-11!4;CL:0000731!2.87e-11!4;CL:0002077!4.74e-11!33;CL:0000068!6.13e-09!3;CL:0000069!6.13e-09!3;CL:0000307!6.13e-09!3;CL:0000377!6.13e-09!3;CL:0000622!9.60e-09!5;CL:0000362!1.11e-08!8;CL:0002166!1.27e-08!3;CL:0002621!5.14e-08!3;CL:0000220!8.32e-08!246;CL:0000240!1.08e-07!6;CL:0000311!1.08e-07!6;CL:0000079!1.08e-07!6;CL:0000237!1.08e-07!6;CL:0000036!1.08e-07!6;CL:0000357!1.08e-07!6;CL:0000114!1.08e-07!6;CL:0002321!1.15e-07!248;CL:0002202!1.39e-07!9;CL:0002632!1.39e-07!9;CL:0000154!2.82e-07!6;CL:0000150!5.41e-07!9;CL:0000575!9.01e-07!2;CL:0002327!9.59e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002159;1.23e-28;14!CL:0002368;4.91e-25;13!CL:0002076;3.62e-20;42!CL:0002077;6.64e-15;34!CL:0000362;1.56e-14;9!CL:0000240;4.02e-14;6!CL:0000311;4.02e-14;6!CL:0000079;4.02e-14;6!CL:0000237;4.02e-14;6!CL:0000244;2.23e-12;4!CL:0000731;2.23e-12;4!CL:0000575;1.06e-11;2!CL:0000317;1.54e-11;2!CL:1000448;1.54e-11;2!CL:0002308;1.54e-11;2!CL:0002140;1.54e-11;2!CL:0000312;3.99e-10;5!CL:0002202;9.27e-10;9!CL:0002632;9.27e-10;9!CL:0000307;3.67e-08;3!CL:0002328;4.16e-08;3!CL:0002231;5.40e-08;3!CL:0002166;1.56e-07;3!CL:0002252;8.66e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,8.28e-29,14;CL:0002368,5.68e-25,13;CL:0002076,1.32e-24,42;CL:0000066,2.42e-21,253;CL:0000223,2.40e-19,58;CL:0002077,1.08e-16,34;CL:0000362,1.68e-14,9;CL:0000240,3.63e-14,6;CL:0000311,3.63e-14,6;CL:0000079,3.63e-14,6;CL:0000237,3.63e-14,6;CL:0000036,3.63e-14,6;CL:0000357,3.63e-14,6;CL:0000114,3.63e-14,6;CL:0000076,4.94e-13,63;CL:0000244,2.28e-12,4;CL:0000731,2.28e-12,4;CL:0000575,9.31e-12,2;CL:0000317,1.50e-11,2;CL:1000448,1.50e-11,2;CL:0002308,1.50e-11,2;CL:0002140,1.50e-11,2;CL:0000312,4.39e-10,5;CL:0002202,9.17e-10,9;CL:0002632,9.17e-10,9;CL:0002321,2.72e-09,250;CL:0000068,3.68e-08,3;CL:0000069,3.68e-08,3;CL:0000307,3.68e-08,3;CL:0000377,3.68e-08,3;CL:0002328,4.09e-08,3;CL:0002231,6.89e-08,3;CL:0000221,7.75e-08,72;CL:0002166,1.04e-07,3;CL:0002252,9.67e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000357;4.02e-14;6!CL:0000114;4.02e-14;6!CL:0000223;1.87e-11;58!CL:0000377;3.67e-08;3 | |||
|ontology_enrichment_disease=DOID:1749!2.94e-20!14 | |ontology_enrichment_disease=DOID:1749!2.94e-20!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.95e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.00e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0000365!4.57e-13!5;UBERON:0003729!1.03e-12!5;UBERON:0000344!6.46e-12!12;UBERON:0004119!9.58e-12!169;UBERON:0000925!9.58e-12!169;UBERON:0006595!9.58e-12!169;UBERON:0005910!8.04e-11!6;UBERON:0003343!2.52e-10!4;UBERON:0004785!2.52e-10!4;UBERON:0001004!2.54e-08!72;UBERON:0001949!5.14e-08!3;UBERON:0000166!5.83e-08!21;UBERON:0000161!1.14e-07!35;UBERON:0003102!1.71e-07!95;UBERON:0000165!5.55e-07!28;UBERON:0000930!5.55e-07!28;UBERON:0001911!9.59e-07!4;UBERON:0005333!9.59e-07!4;UBERON:0008425!9.59e-07!4;UBERON:0005311!9.59e-07!4 | |ontology_enrichment_uberon=UBERON:0000365!4.57e-13!5;UBERON:0003729!1.03e-12!5;UBERON:0000344!6.46e-12!12;UBERON:0004119!9.58e-12!169;UBERON:0000925!9.58e-12!169;UBERON:0006595!9.58e-12!169;UBERON:0005910!8.04e-11!6;UBERON:0003343!2.52e-10!4;UBERON:0004785!2.52e-10!4;UBERON:0001004!2.54e-08!72;UBERON:0001949!5.14e-08!3;UBERON:0000166!5.83e-08!21;UBERON:0000161!1.14e-07!35;UBERON:0003102!1.71e-07!95;UBERON:0000165!5.55e-07!28;UBERON:0000930!5.55e-07!28;UBERON:0001911!9.59e-07!4;UBERON:0005333!9.59e-07!4;UBERON:0008425!9.59e-07!4;UBERON:0005311!9.59e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002419;1.54e-11;2!UBERON:0007771;1.54e-11;2!UBERON:0003297;1.54e-11;2!UBERON:0001821;1.54e-11;2!UBERON:0003487;1.54e-11;2!UBERON:0001820;1.54e-11;2!UBERON:0000365;5.36e-10;5!UBERON:0001003;1.29e-08;15!UBERON:0007376;1.29e-08;15!UBERON:0005910;2.10e-08;6!UBERON:0004815;4.16e-08;3!UBERON:0002031;4.16e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,1.50e-11,2;UBERON:0007771,1.50e-11,2;UBERON:0003297,1.50e-11,2;UBERON:0001821,1.50e-11,2;UBERON:0003487,1.50e-11,2;UBERON:0001820,1.50e-11,2;UBERON:0005089,1.50e-11,2;UBERON:0005088,1.50e-11,2;UBERON:0000365,5.44e-10,5;UBERON:0001003,1.35e-08,15;UBERON:0007376,1.35e-08,15;UBERON:0007383,1.35e-08,15;UBERON:0005910,2.12e-08,6;UBERON:0004815,4.09e-08,3;UBERON:0002031,4.09e-08,3;UBERON:0000065,6.50e-08,54;UBERON:0005157,1.35e-07,47;UBERON:0004119,1.77e-07,160;UBERON:0000925,1.77e-07,160;UBERON:0006595,1.77e-07,160;UBERON:0003102,2.70e-07,99 | |||
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| ||
|short_description=p@chr1:200644175..200644191,+ | |short_description=p@chr1:200644175..200644191,+ | ||
}} | }} |
Latest revision as of 02:02, 28 July 2015
Short description: | p@chr1:200644175..200644191, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:200644175..200644191, + |
Coexpression cluster: | C2406_Prostate_nasal_squamous_Urothelial_Small_Corneal_Keratinocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin gland | 1.50e-11 | 2 |
epidermis gland | 1.50e-11 | 2 |
gland of integumental system | 1.50e-11 | 2 |
sebaceous gland | 1.50e-11 | 2 |
skin sebaceous gland | 1.50e-11 | 2 |
sweat gland | 1.50e-11 | 2 |
sweat gland placode | 1.50e-11 | 2 |
sebaceous gland placode | 1.50e-11 | 2 |
urothelium | 5.44e-10 | 5 |
skin epidermis | 1.35e-08 | 15 |
outer epithelium | 1.35e-08 | 15 |
enveloping layer of ectoderm | 1.35e-08 | 15 |
transitional epithelium | 2.12e-08 | 6 |
lower respiratory tract epithelium | 4.09e-08 | 3 |
epithelium of bronchus | 4.09e-08 | 3 |
respiratory tract | 6.50e-08 | 54 |
epithelial fold | 1.35e-07 | 47 |
endoderm-derived structure | 1.77e-07 | 160 |
endoderm | 1.77e-07 | 160 |
presumptive endoderm | 1.77e-07 | 160 |
surface structure | 2.70e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.00e-12 | 14 |