FF:12204-129C8: Difference between revisions

Latest revision as of 18:34, 4 June 2020

Name:	CD19+ B Cells (pluriselect), donor090612, donation1
Species:	Human (Homo sapiens)
Library ID:	CNhs12183,RDhi10010
Sample type:	primary cells
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	blood
dev stage	NA
sex	NA
age	NA
cell type	b cell
cell line	NA
company	NA
collaboration	Matched_genome_OSC(contact:Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	NA
extraction protocol (Details)	NA

CAGE Accession numbers

Method		Sample accession id
RNA-Seq		SAMD00013688

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs12183		CAGE		DRX008055		DRR008927
RDhi10010		RNA-Seq		DRX012344		DRR013792

Accession ID Hg19

Library id		BAM		CTSS
CNhs12183		DRZ000352		DRZ001737
RDhi10010		DRZ002993

Accession ID Hg38

Library id		BAM		CTSS
CNhs12183		DRZ011702		DRZ013087
RDhi10010

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.0859
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.205
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0.197
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.332
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.32
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0.435
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.501
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.588
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.283
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	1.419
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.432
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.17
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.491
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0.197
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0.0937
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.552
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.123
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0.928
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.28
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.438
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.294
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0.197
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0.197
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	1.055
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.751
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12183

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	1.17423e-5
MA0003.1	MA0003.1	0.645
MA0004.1	MA0004.1	0.487
MA0006.1	MA0006.1	0.437
MA0007.1	MA0007.1	0.725
MA0009.1	MA0009.1	0.691
MA0014.1	MA0014.1	0.552
MA0017.1	MA0017.1	0.119
MA0018.2	MA0018.2	0.337
MA0019.1	MA0019.1	0.896
MA0024.1	MA0024.1	0.746
MA0025.1	MA0025.1	0.898
MA0027.1	MA0027.1	0.54
MA0028.1	MA0028.1	1.9634e-6
MA0029.1	MA0029.1	0.383
MA0030.1	MA0030.1	0.0137
MA0031.1	MA0031.1	0.0236
MA0035.2	MA0035.2	0.279
MA0038.1	MA0038.1	0.604
MA0039.2	MA0039.2	0.404
MA0040.1	MA0040.1	0.828
MA0041.1	MA0041.1	0.187
MA0042.1	MA0042.1	0.824
MA0043.1	MA0043.1	0.367
MA0046.1	MA0046.1	0.667
MA0047.2	MA0047.2	0.336
MA0048.1	MA0048.1	0.408
MA0050.1	MA0050.1	1.16501e-11
MA0051.1	MA0051.1	7.27103e-6
MA0052.1	MA0052.1	0.133
MA0055.1	MA0055.1	0.454
MA0057.1	MA0057.1	0.729
MA0058.1	MA0058.1	0.291
MA0059.1	MA0059.1	0.387
MA0060.1	MA0060.1	0.759
MA0061.1	MA0061.1	1.07739e-5
MA0062.2	MA0062.2	5.52484e-19
MA0065.2	MA0065.2	0.0855
MA0066.1	MA0066.1	0.585
MA0067.1	MA0067.1	0.341
MA0068.1	MA0068.1	0.366
MA0069.1	MA0069.1	0.382
MA0070.1	MA0070.1	0.462
MA0071.1	MA0071.1	0.757
MA0072.1	MA0072.1	0.633
MA0073.1	MA0073.1	0.559
MA0074.1	MA0074.1	0.727
MA0076.1	MA0076.1	1.84616e-11
MA0077.1	MA0077.1	0.29
MA0078.1	MA0078.1	0.667
MA0079.2	MA0079.2	0.574
MA0080.2	MA0080.2	4.08716e-12
MA0081.1	MA0081.1	2.09329e-4
MA0083.1	MA0083.1	0.215
MA0084.1	MA0084.1	0.39
MA0087.1	MA0087.1	0.298
MA0088.1	MA0088.1	0.0863
MA0090.1	MA0090.1	6.51167e-5
MA0091.1	MA0091.1	0.76
MA0092.1	MA0092.1	0.72
MA0093.1	MA0093.1	0.544
MA0099.2	MA0099.2	1.73585e-4
MA0100.1	MA0100.1	0.245
MA0101.1	MA0101.1	0.00191
MA0102.2	MA0102.2	0.288
MA0103.1	MA0103.1	0.0119
MA0104.2	MA0104.2	0.117
MA0105.1	MA0105.1	2.20053e-7
MA0106.1	MA0106.1	0.314
MA0107.1	MA0107.1	0.00142
MA0108.2	MA0108.2	3.96136e-7
MA0111.1	MA0111.1	0.477
MA0112.2	MA0112.2	0.0861
MA0113.1	MA0113.1	0.94
MA0114.1	MA0114.1	0.22
MA0115.1	MA0115.1	0.379
MA0116.1	MA0116.1	3.57123e-5
MA0117.1	MA0117.1	0.594
MA0119.1	MA0119.1	0.36
MA0122.1	MA0122.1	0.183
MA0124.1	MA0124.1	0.538
MA0125.1	MA0125.1	0.741
MA0131.1	MA0131.1	0.0464
MA0135.1	MA0135.1	0.0566
MA0136.1	MA0136.1	2.03528e-19
MA0137.2	MA0137.2	0.445
MA0138.2	MA0138.2	0.773
MA0139.1	MA0139.1	0.265
MA0140.1	MA0140.1	0.062
MA0141.1	MA0141.1	0.888
MA0142.1	MA0142.1	0.175
MA0143.1	MA0143.1	0.895
MA0144.1	MA0144.1	0.909
MA0145.1	MA0145.1	0.783
MA0146.1	MA0146.1	0.267
MA0147.1	MA0147.1	0.142
MA0148.1	MA0148.1	0.798
MA0149.1	MA0149.1	0.18
MA0150.1	MA0150.1	0.529
MA0152.1	MA0152.1	0.281
MA0153.1	MA0153.1	0.0103
MA0154.1	MA0154.1	9.65775e-4
MA0155.1	MA0155.1	0.677
MA0156.1	MA0156.1	3.29066e-17
MA0157.1	MA0157.1	0.0869
MA0159.1	MA0159.1	0.0494
MA0160.1	MA0160.1	0.429
MA0162.1	MA0162.1	0.975
MA0163.1	MA0163.1	7.99887e-9
MA0164.1	MA0164.1	0.843
MA0258.1	MA0258.1	0.213
MA0259.1	MA0259.1	0.517

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12183

Novel motif	Logo	P-value
1	1	0.151
10	10	0.0358
100	100	0.521
101	101	0.305
102	102	0.887
103	103	0.0766
104	104	0.158
105	105	0.405
106	106	0.59
107	107	0.261
108	108	0.239
109	109	0.111
11	11	0.127
110	110	0.172
111	111	0.167
112	112	0.158
113	113	0.0104
114	114	0.435
115	115	0.842
116	116	0.618
117	117	0.00104
118	118	0.19
119	119	0.848
12	12	0.808
120	120	0.629
121	121	0.412
122	122	0.444
123	123	0.093
124	124	0.109
125	125	0.139
126	126	0.114
127	127	0.644
128	128	0.43
129	129	0.759
13	13	0.514
130	130	0.382
131	131	0.488
132	132	0.263
133	133	0.00816
134	134	0.584
135	135	0.816
136	136	0.507
137	137	0.0475
138	138	0.43
139	139	0.0905
14	14	0.299
140	140	0.484
141	141	0.252
142	142	0.509
143	143	0.0673
144	144	0.723
145	145	0.297
146	146	0.128
147	147	0.0582
148	148	0.663
149	149	0.474
15	15	0.158
150	150	0.556
151	151	0.852
152	152	0.575
153	153	0.655
154	154	0.857
155	155	0.0168
156	156	0.29
157	157	0.162
158	158	0.0954
159	159	0.179
16	16	0.825
160	160	0.532
161	161	0.045
162	162	0.556
163	163	0.268
164	164	0.499
165	165	0.28
166	166	0.539
167	167	0.12
168	168	0.203
169	169	0.599
17	17	0.984
18	18	0.814
19	19	0.649
2	2	0.848
20	20	0.606
21	21	0.758
22	22	0.765
23	23	0.553
24	24	0.33
25	25	0.0264
26	26	0.261
27	27	0.246
28	28	0.303
29	29	0.111
3	3	0.0874
30	30	0.346
31	31	0.744
32	32	0.122
33	33	0.36
34	34	0.847
35	35	0.194
36	36	0.0371
37	37	0.119
38	38	0.396
39	39	0.451
4	4	0.704
40	40	0.177
41	41	0.145
42	42	0.139
43	43	0.201
44	44	0.57
45	45	0.926
46	46	0.237
47	47	0.0829
48	48	0.152
49	49	0.183
5	5	0.477
50	50	0.979
51	51	0.505
52	52	0.481
53	53	0.397
54	54	0.973
55	55	0.106
56	56	0.676
57	57	0.53
58	58	0.0202
59	59	0.352
6	6	0.863
60	60	0.519
61	61	0.0352
62	62	0.0312
63	63	0.766
64	64	0.36
65	65	0.862
66	66	0.79
67	67	0.402
68	68	0.237
69	69	0.585
7	7	0.126
70	70	0.228
71	71	0.0561
72	72	0.0566
73	73	0.527
74	74	0.469
75	75	0.0111
76	76	0.0368
77	77	0.535
78	78	0.27
79	79	0.223
8	8	0.848
80	80	0.013
81	81	0.262
82	82	0.14
83	83	0.866
84	84	0.286
85	85	0.819
86	86	0.132
87	87	0.0879
88	88	0.669
89	89	0.912
9	9	0.43
90	90	0.0148
91	91	0.718
92	92	0.562
93	93	0.772
94	94	0.08
95	95	0.0109
96	96	0.465
97	97	0.464
98	98	0.117
99	99	0.0182

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12183

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000025 CD19-positive B cell sample
FF:0000210 human sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000945 (lymphocyte of B lineage)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000236 (B cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000025 (CD19-positive B cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001062,UBERON:0002384
+|DRA_sample_Accession=RNA-Seq@SAMD00013688
-|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000051,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000236,CL:0000255,CL:0000542,CL:0000548,CL:0000566,CL:0000723,CL:0000738,CL:0000826,CL:0000837,CL:0000838,CL:0000945,CL:0000988,CL:0002031,CL:0002032,CL:0002087,CL:0002320,CL:0002371
+|accession_numbers=CAGE;DRX008055;DRR008927;DRZ000352;DRZ001737;DRZ011702;DRZ013087!RNA-Seq;DRX012344;DRR013792;DRZ002993;
+|ancestors_in_anatomy_facet=
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000945,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000236
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000025
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr16:85932760..85932775,+!p1@IRF8!2.54!344.85!IRF8;;chr2:100759010..100759035,-!p1@AFF3!2.45!283.93!AFF3;;chr19:50922187..50922204,+!p1@SPIB!2.38!240.82!SPIB;;chr11:111249993..111250006,-!p1@POU2AF1!2.35!225.30!POU2AF1;;chr6:391743..391759,+!p1@IRF4!2.08!119.55!IRF4;;chr2:100759037..100759058,-!p2@AFF3!2.06!113.23!AFF3;;chr11:47400078..47400106,-!p1@SPI1!2.05!110.93!SPI1;;chr6:91006518..91006570,-!p1@BACH2!2.02!228.18!BACH2;;chr2:231090433..231090469,+!p1@SP140!2.00!98.86!SP140;;chr2:231090471..231090504,+!p2@SP140!1.95!88.51!SP140;;chr17:38020392..38020477,-!p1@IKZF3!1.93!84.49!IKZF3;;chr5:88178983..88179012,-!p1@MEF2C!1.83!490.26!MEF2C;;chr3:71355163..71355209,-!p5@FOXP1!1.82!89.09!FOXP1;;chr2:100758991..100759009,-!p3@AFF3!1.82!65.52!AFF3;;chr8:86099884..86099918,+!p4@E2F5!1.79!60.35!E2F5;;chr6:91006575..91006602,-!p2@BACH2!1.73!77.02!BACH2;;chr3:32023232..32023273,+!p1@ZNF860!1.72!72.99!ZNF860;;chr2:68592406..68592424,+!p1@PLEK!1.72!51.15!PLEK;;chr7:50343634..50343717,+!p2@IKZF1!1.65!43.68!IKZF1;;chr2:60780607..60780624,-!p2@BCL11A!1.61!117.82!BCL11A;;chr7:50344251..50344288,+!p3@IKZF1!1.60!39.08!IKZF1;;chr17:38020557..38020572,-!p4@IKZF3!1.60!38.51!IKZF3;;chr19:16435625..16435682,+!p1@KLF2!1.54!1015.59!KLF2;;chr20:56195474..56195506,-!p1@ZBP1!1.52!32.19!ZBP1;;chr5:158526756..158526797,-!p3@EBF1!1.47!28.74!EBF1;;chr19:13213662..13213686,-!p1@LYL1!1.42!37.36!LYL1;;chr4:57522513..57522548,-!p4@HOPX!1.42!25.29!HOPX;;chr13:41593425..41593480,-!p1@ELF1!1.41!150.59!ELF1;;chr8:86089627..86089653,+!p3@E2F5!1.41!28.16!E2F5;;chr7:50344289..50344323,+!p1@IKZF1!1.41!24.71!IKZF1;;chr2:60781201..60781258,-!p3@BCL11A!1.40!24.14!BCL11A;;chr3:71409904..71409927,-!p46@FOXP1!1.35!21.27!FOXP1;;chr7:50348268..50348366,+!p4@IKZF1!1.34!20.69!IKZF1;;chr1:25256756..25256774,-!p1@RUNX3!1.31!36.21!RUNX3;;chr2:60778035..60778060,-!p4@BCL11A!1.31!22.99!BCL11A;;chr8:86089531..86089544,+!p7@E2F5!1.30!18.97!E2F5;;chr10:94449703..94449718,+!p1@HHEX!1.29!70.69!HHEX;;chr18:52989031..52989079,-!p2@TCF4!1.29!43.11!TCF4;;chr14:69262947..69262986,-!p3@ZFP36L1!1.29!22.42!ZFP36L1;;chr5:88179017..88179046,-!p2@MEF2C!1.28!71.84!MEF2C;;chr19:13213704..13213726,-!p3@LYL1!1.27!22.99!LYL1;;chr4:185395590..185395627,-!p3@IRF2!1.26!21.27!IRF2;;chr17:38020516..38020544,-!p5@IKZF3!1.26!17.24!IKZF3;;chr5:88120151..88120177,-!p6@MEF2C!1.26!17.24!MEF2C;;chr17:37934204..37934241,-!p3@IKZF3!1.23!16.09!IKZF3;;chr2:68592394..68592405,+!p2@PLEK!1.23!16.09!PLEK;;chr3:71631151..71631194,-!p15@FOXP1!1.20!16.67!FOXP1;;chr10:51585449..51585487,+!p6@NCOA4!1.20!14.94!NCOA4;;chr19:42636586..42636607,-!p1@POU2F2!1.19!39.66!POU2F2;;chr4:185395633..185395651,-!p2@IRF2!1.18!22.42!IRF2;;chr7:64838786..64838809,+!p2@ZNF92!1.17!78.17!ZNF92;;chr6:91006503..91006517,-!p3@BACH2!1.17!13.79!BACH2;;chr7:63505799..63505904,+!p1@ZNF727!1.17!13.79!ZNF727;;chr7:77469439..77469459,+!p6@PHTF2!1.17!13.79!PHTF2;;chr17:38020481..38020506,-!p7@IKZF3!1.17!13.79!IKZF3;;chr11:128563948..128564003,+!p1@FLI1!1.15!156.33!FLI1;;chr20:50159198..50159299,-!p1@NFATC2!1.15!18.97!NFATC2;;chr2:231090344..231090361,-!p3@SP110!1.15!13.22!SP110;;chr3:18487057..18487105,-!p4@SATB1!1.15!13.22!SATB1;;chr19:58220517..58220583,-!p1@ZNF154!1.14!40.23!ZNF154;;chr3:18486354..18486377,-!p2@SATB1!1.14!16.09!SATB1;;chr14:75988771..75988826,+!p1@BATF!1.12!16.09!BATF;;chr16:85936412..85936431,+!p2@IRF8!1.10!11.50!IRF8;;chr5:158526709..158526741,-!p7@EBF1!1.10!11.50!EBF1;;chr9:37034186..37034216,-!p2@PAX5!1.10!11.50!PAX5;;chr9:117150254..117150271,-!p1@AKNA!1.09!31.04!AKNA;;chr7:77428066..77428132,+!p2@PHTF2!1.08!71.27!PHTF2;;chrX:106960180..106960197,-!p2@TSC22D3!1.08!42.53!TSC22D3;;chrX:101186981..101187030,-!p1@ZMAT1!1.08!36.21!ZMAT1;;chr19:36391434..36391450,-!p1@NFKBID!1.08!21.84!NFKBID;;chr19:36204309..36204335,+!p1@ZBTB32!1.08!10.92!ZBTB32;;chr9:37027156..37027193,-!p4@PAX5!1.08!10.92!PAX5;;chr6:144385698..144385742,-!p2@PLAGL1!1.07!13.22!PLAGL1;;chr1:151319654..151319698,-!p2@RFX5!1.05!22.42!RFX5;;chr7:64126535..64126559,+!p2@ZNF107!1.05!21.84!ZNF107;;chr10:94451574..94451587,+!p6@HHEX!1.05!10.35!HHEX;;chr2:100759060..100759073,-!p8@AFF3!1.05!10.35!AFF3;;chr10:104154246..104154347,+!p3@NFKB2!1.04!62.07!NFKB2;;chr2:145277640..145277771,-!p1@ZEB2!1.03!132.19!ZEB2;;chr5:88179195..88179224,-!p3@MEF2C!1.03!15.52!MEF2C;;chr9:37003148..37003152,-!p5@PAX5!1.03!9.77!PAX5;;chr2:61108695..61108753,+!p1@REL!1.02!66.10!REL;;chrX:106960221..106960236,-!p3@TSC22D3!1.02!26.44!TSC22D3;;chr10:94449675..94449694,+!p2@HHEX!1.02!25.86!HHEX;;chr16:3313791..3313834,+!p2@ZNF263!1.02!21.27!ZNF263;;chr19:45579725..45579743,-!p1@ZNF296!1.01!41.96!ZNF296;;chr19:19779619..19779670,+!p1@ZNF101!1.01!26.44!ZNF101;;chr17:38020607..38020621,-!p9@IKZF3!1.01!9.20!IKZF3;;chr7:50343895..50343936,+!p5@IKZF1!1.01!9.20!IKZF1;;chr4:81104895..81104920,+!p2@PRDM8!0.99!13.22!PRDM8;;chr14:64971288..64971316,-!p2@ZBTB25!0.98!27.01!ZBTB25;;chrX:56258844..56258882,+!p1@KLF8!0.98!12.07!KLF8;;chr11:47400062..47400077,-!p2@SPI1!0.98!8.62!SPI1;;chr17:45810594..45810608,+!p1@TBX21!0.98!8.62!TBX21;;chr3:71179699..71179744,-!p2@FOXP1!0.97!63.80!FOXP1;;chr18:6414884..6414942,-!p1@L3MBTL4!0.96!10.35!L3MBTL4;;chr6:41700616..41700664,-!p8@TFEB!0.96!8.05!TFEB;;chr20:46130672..46130686,+!p2@NCOA3!0.95!36.78!NCOA3;;chr2:231084659..231084721,-!p1@SP110!0.94!185.07!SP110;;chr11:128392273..128392308,-!p2@ETS1!0.94!33.91!ETS1;;chr7:50344144..50344157,+!p6@IKZF1!0.93!7.47!IKZF1;;chr17:37934188..37934202,-!p8@IKZF3!0.93!7.47!IKZF3;;chr17:56565257..56565283,-!p2@HSF5!0.93!7.47!HSF5;;chr2:100759076..100759088,-!p10@AFF3!0.93!7.47!AFF3;;chrX:56258900..56258917,+!p4@KLF8!0.93!7.47!KLF8;;chr19:20748574..20748599,-!p1@ZNF737!0.92!45.41!ZNF737;;chr16:68119324..68119364,+!p1@NFATC3!0.92!33.91!NFATC3;;chr8:81397820..81397836,+!p2@ZBTB10!0.92!9.20!ZBTB10;;chrX:131624056..131624069,-!p2@MBNL3!0.91!9.77!MBNL3;;chr2:208031542..208031595,-!p2@KLF7!0.90!51.73!KLF7;;chr21:36421535..36421610,-!p2@RUNX1!0.90!25.86!RUNX1;;chr3:71630844..71630862,-!p40@FOXP1!0.90!6.90!FOXP1;;chr17:37934365..37934387,-!p2@IKZF3!0.90!6.90!IKZF3;;chrX:106960285..106960299,-!p1@TSC22D3!0.89!191.39!TSC22D3;;chr2:61108650..61108687,+!p2@REL!0.89!34.49!REL;;chrX:106960249..106960260,-!p5@TSC22D3!0.89!10.92!TSC22D3;;chr19:38085768..38085821,+!p1@ZNF540!0.89!10.35!ZNF540;;chr1:14026671..14026705,+!p2@PRDM2!0.88!41.96!PRDM2;;chr2:208394817..208394834,+!p3@CREB1!0.88!27.59!CREB1;;chr6:157098579..157098634,+!p4@ARID1B!0.88!15.52!ARID1B;;chr1:8763463..8763499,-!p6@RERE!0.87!18.39!RERE;;chr10:64576105..64576133,-!p1@EGR2!0.87!13.79!EGR2;;chr19:22235279..22235301,+!p1@ZNF257!0.87!12.64!ZNF257;;chr19:13213954..13214021,-!p4@LYL1!0.86!6.32!LYL1;;chr1:167298300..167298319,+!p2@POU2F1!0.86!6.32!POU2F1;;chr7:128577972..128578047,+!p1@IRF5!0.85!9.77!IRF5;;chr11:128392085..128392232,-!p1@ETS1!0.84!213.23!ETS1;;chr1:158979686..158979745,+!p1@IFI16!0.84!209.78!IFI16;;chr3:129158768..129158819,-!p1@MBD4!0.84!96.56!MBD4;;chr9:3525727..3525828,-!p2@RFX3!0.84!16.09!RFX3;;chr18:42260030..42260055,+!p3@SETBP1!0.84!7.47!SETBP1;;chr7:64126503..64126528,+!p1@ZNF107!0.83!43.68!ZNF107;;chrX:131623044..131623089,-!p1@MBNL3!0.83!25.29!MBNL3;;chr19:11959532..11959593,+!p1@ZNF439!0.83!23.56!ZNF439;;chr1:91487836..91487854,-!p3@ZNF644!0.83!13.79!ZNF644;;chr8:81397876..81397898,+!p5@ZBTB10!0.83!6.90!ZBTB10;;chr19:22193731..22193751,-!p1@ZNF208!0.83!5.75!ZNF208;;chr19:47616992..47617011,-!p4@ZC3H4!0.82!12.64!ZC3H4;;chr19:37997297..37997362,+!p3@ZNF793!0.81!9.20!ZNF793;;chrX:56258811..56258838,+!p2@KLF8!0.81!7.47!KLF8;;chr8:81397846..81397860,+!p3@ZBTB10!0.81!6.90!ZBTB10;;chr8:123793860..123793921,+!p2@ZHX2!0.80!15.52!ZHX2;;chr2:178128250..178128293,-!p6@NFE2L2!0.80!14.37!NFE2L2;;chr18:42260920..42260951,+!p4@SETBP1!0.79!5.17!SETBP1;;chr1:14057463..14057496,+!p4@PRDM2!0.79!5.17!PRDM2;;chr1:158978768..158978800,+!p8@IFI16!0.79!5.17!IFI16;;chr10:51585430..51585448,+!p7@NCOA4!0.79!5.17!NCOA4;;chr7:150102756..150102772,+!p5@ZNF775!0.79!5.17!ZNF775;;chr8:86089498..86089519,+!p6@E2F5!0.79!5.17!E2F5;;chr2:231191875..231191918,+!p1@SP140L!0.78!54.03!SP140L;;chr6:109804412..109804458,-!p1@ZBTB24!0.78!48.28!ZBTB24;;chr7:21467674..21467727,+!p1@SP4!0.78!21.84!SP4;;chr19:9546177..9546224,-!p1@ZNF266!0.77!37.93!ZNF266;;chr19:58446721..58446779,-!p1@ZNF418!0.77!14.37!ZNF418;;chr13:41240737..41240787,-!p1@FOXO1!0.75!60.35!FOXO1;;chr18:52989001..52989030,-!p10@TCF4!0.75!5.17!TCF4;;chr2:97202991..97203043,+!p3@ARID5A!0.75!4.60!ARID5A;;chr3:71631248..71631268,-!p26@FOXP1!0.75!4.60!FOXP1;;chr5:158526693..158526706,-!p8@EBF1!0.75!4.60!EBF1;;chr7:115799942..115799955,-!p5@TFEC!0.75!4.60!TFEC;;chr19:21106049..21106072,+!p1@ZNF85!0.74!27.59!ZNF85;;chr6:28092375..28092412,+!p1@ZSCAN16!0.74!20.69!ZSCAN16;;chr6:106534230..106534254,+!p2@PRDM1!0.74!12.07!PRDM1;;chr7:64838754..64838778,+!p1@ZNF92!0.73!47.13!ZNF92;;chr6:41703296..41703367,-!p1@TFEB!0.73!24.71!TFEB;;chr7:64363638..64363667,+!p1@ZNF273!0.73!24.14!ZNF273;;chr19:58694742..58694800,+!p2@ZNF274!0.73!19.54!ZNF274;;chr9:117150303..117150312,-!p3@AKNA!0.73!5.75!AKNA;;chr2:231280908..231280945,+!p1@SP100!0.72!186.22!SP100;;chr6:106534192..106534224,+!p1@PRDM1!0.72!13.22!PRDM1;;chr11:128392309..128392350,-!p3@ETS1!0.72!10.92!ETS1;;chr18:52989081..52989117,-!p7@TCF4!0.72!6.90!TCF4;;chr17:46621311..46621332,-!p8@HOXB2!0.72!5.75!HOXB2;;chr19:49140609..49140643,-!p1@DBP!0.71!26.44!DBP;;chr17:4981745..4981810,+!p1@ZFP3!0.71!22.42!ZFP3;;chr19:11877838..11877915,+!p1@ZNF441!0.71!14.37!ZNF441;;chr5:88179230..88179270,-!p4@MEF2C!0.71!8.62!MEF2C;;chr20:46130619..46130664,+!p1@NCOA3!0.70!124.15!NCOA3;;chr18:77160282..77160343,+!p2@NFATC1!0.70!28.16!NFATC1;;chr19:19976714..19976729,+!p3@ZNF253!0.70!8.05!ZNF253;;chr17:37934138..37934150,-!p12@IKZF3!0.70!4.02!IKZF3;;chr18:42260861..42260882,+!p5@SETBP1!0.70!4.02!SETBP1;;chr1:14026722..14026733,+!p5@PRDM2!0.70!4.02!PRDM2;;chr3:114173720..114173794,-!p6@ZBTB20!0.70!4.02!ZBTB20;;chr3:189349162..189349207,+!p2@TP63!0.70!4.02!TP63;;chr4:57522476..57522500,-!p7@HOPX!0.70!4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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000236;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000542;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988
+|ffid_belonging_in_development=CL:0000134,CL:0000051
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 35: / Line 42: @@
 |fonse_treatment_closure=
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation1.CNhs12183.12204-129C8.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation1.CNhs12183.12204-129C8.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation1.CNhs12183.12204-129C8.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation1.CNhs12183.12204-129C8.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation1.CNhs12183.12204-129C8.hg38.nobarcode.ctss.bed.gz
 |id=FF:12204-129C8
-|is_a=EFO:0002091;;FF:0000002;;FF:0000025;;FF:0000210
+|is_a=EFO:0002091;;FF:0000025;;FF:0000210
+|is_obsolete=
+|library_id=CNhs12183!RDhi10010
+|library_id_phase_based=2:CNhs12183
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12204
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12204
 |name=CD19+ B Cells (pluriselect), donor090612, donation1
 |namespace=FANTOM5
@@ Line 42: / Line 61: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs12183,LSID975,release011,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
+|refex=http://refex.dbcls.jp/genelist.php?lang
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 |rna_box=129
 |rna_catalog_number=
@@ Line 57: / Line 79: @@
 |rna_weight_ug=1.47875
 |sample_age=
+|sample_category=primary cells
 |sample_cell_catalog=
 |sample_cell_line=
@@ Line 69: / Line 92: @@
 |sample_ethnicity=
 |sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;8.93792864650203e-227!GO:0043227;membrane-bound organelle;2.15188711363114e-207!GO:0043231;intracellular membrane-bound organelle;4.63909019817769e-207!GO:0043226;organelle;1.27285289628713e-193!GO:0043229;intracellular organelle;6.07566348538857e-193!GO:0005737;cytoplasm;9.15400878909486e-131!GO:0044422;organelle part;1.63523459534723e-115!GO:0044446;intracellular organelle part;7.74303192810102e-114!GO:0005634;nucleus;3.90834998416499e-107!GO:0032991;macromolecular complex;2.01478344153595e-100!GO:0044444;cytoplasmic part;9.27528185730016e-99!GO:0043170;macromolecule metabolic process;4.74386751300675e-95!GO:0044237;cellular metabolic process;1.51367865624733e-94!GO:0044238;primary metabolic process;1.18340496258123e-90!GO:0030529;ribonucleoprotein complex;8.97330965017113e-84!GO:0003723;RNA binding;2.6798467590841e-79!GO:0044428;nuclear part;6.71104033754773e-78!GO:0043233;organelle lumen;3.20109343379451e-68!GO:0031974;membrane-enclosed lumen;3.20109343379451e-68!GO:0010467;gene expression;3.44325324700243e-68!GO:0043283;biopolymer metabolic process;1.21256700388678e-67!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.97851881647584e-63!GO:0005739;mitochondrion;2.36373469577779e-57!GO:0006396;RNA processing;9.49027475742879e-56!GO:0043234;protein complex;3.16028320946417e-51!GO:0006412;translation;9.12119762893351e-51!GO:0031981;nuclear lumen;2.49294682700589e-47!GO:0005515;protein binding;9.29892833527395e-47!GO:0003676;nucleic acid binding;2.51154984568999e-46!GO:0005840;ribosome;2.85142702900246e-46!GO:0033036;macromolecule localization;6.56193355757404e-46!GO:0015031;protein transport;8.06027372715478e-45!GO:0016071;mRNA metabolic process;9.27253212357439e-45!GO:0045184;establishment of protein localization;3.09746122658004e-43!GO:0008104;protein localization;2.51099885330139e-42!GO:0019538;protein metabolic process;2.60115455749914e-40!GO:0008380;RNA splicing;3.74331577656883e-40!GO:0003735;structural constituent of ribosome;4.92488781883738e-40!GO:0044429;mitochondrial part;2.11248047202039e-39!GO:0031090;organelle membrane;5.02089203993175e-39!GO:0016070;RNA metabolic process;2.36047307927118e-38!GO:0044267;cellular protein metabolic process;5.96355458615702e-38!GO:0006397;mRNA processing;1.0029715167237e-37!GO:0031967;organelle envelope;1.45481090275082e-37!GO:0031975;envelope;3.12482114016069e-37!GO:0033279;ribosomal subunit;4.39315750158035e-37!GO:0044260;cellular macromolecule metabolic process;5.44932949502367e-37!GO:0009059;macromolecule biosynthetic process;1.11369117791161e-36!GO:0005829;cytosol;1.88771160241313e-32!GO:0022613;ribonucleoprotein complex biogenesis and assembly;6.07287050938924e-32!GO:0005654;nucleoplasm;6.57910103786839e-32!GO:0046907;intracellular transport;8.19481611322681e-31!GO:0065003;macromolecular complex assembly;1.84911459441482e-30!GO:0044249;cellular biosynthetic process;2.13238997136722e-30!GO:0006259;DNA metabolic process;6.20419017764941e-30!GO:0005681;spliceosome;1.01831827233105e-29!GO:0009058;biosynthetic process;1.3803443120503e-29!GO:0006886;intracellular protein transport;3.31013234849037e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.31013234849037e-28!GO:0016043;cellular component organization and biogenesis;1.54587536954905e-27!GO:0044445;cytosolic part;1.39883220572493e-26!GO:0022607;cellular component assembly;4.31000987709731e-26!GO:0044451;nucleoplasm part;2.61464264622123e-25!GO:0019866;organelle inner membrane;1.2403787245886e-24!GO:0005740;mitochondrial envelope;1.51280148600327e-24!GO:0031966;mitochondrial membrane;2.61425814666887e-23!GO:0006996;organelle organization and biogenesis;7.1843511586954e-23!GO:0051649;establishment of cellular localization;3.1636963324891e-22!GO:0005743;mitochondrial inner membrane;3.74432080865435e-22!GO:0051641;cellular localization;7.36380989934476e-22!GO:0006119;oxidative phosphorylation;5.37189575715905e-21!GO:0022618;protein-RNA complex assembly;2.00478240053016e-20!GO:0006512;ubiquitin cycle;5.73507878654886e-20!GO:0044265;cellular macromolecule catabolic process;2.20068259441286e-19!GO:0015935;small ribosomal subunit;2.24450850745151e-19!GO:0019941;modification-dependent protein catabolic process;4.40600070611122e-19!GO:0043632;modification-dependent macromolecule catabolic process;4.40600070611122e-19!GO:0051603;proteolysis involved in cellular protein catabolic process;4.75806756152548e-19!GO:0000166;nucleotide binding;4.83502085321207e-19!GO:0006511;ubiquitin-dependent protein catabolic process;7.73242780089498e-19!GO:0044257;cellular protein catabolic process;1.06794682130239e-18!GO:0015934;large ribosomal subunit;1.32102870796921e-18!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.47313172129431e-18!GO:0016817;hydrolase activity, acting on acid anhydrides;1.78930271644058e-18!GO:0016462;pyrophosphatase activity;2.26993124735958e-18!GO:0044455;mitochondrial membrane part;3.79526684139379e-18!GO:0043228;non-membrane-bound organelle;3.81316855534258e-18!GO:0043232;intracellular non-membrane-bound organelle;3.81316855534258e-18!GO:0017111;nucleoside-triphosphatase activity;3.90433777749132e-18!GO:0008134;transcription factor binding;4.68514622877431e-18!GO:0043285;biopolymer catabolic process;8.26094986873412e-18!GO:0031980;mitochondrial lumen;1.12166337270979e-17!GO:0005759;mitochondrial matrix;1.12166337270979e-17!GO:0016604;nuclear body;1.26535971762587e-17!GO:0016874;ligase activity;3.78160453972685e-17!GO:0006974;response to DNA damage stimulus;8.674519203972e-17!GO:0005730;nucleolus;1.78335186358788e-16!GO:0006915;apoptosis;9.49473453546776e-16!GO:0012501;programmed cell death;9.67285835722024e-16!GO:0005746;mitochondrial respiratory chain;1.40064562660297e-15!GO:0006457;protein folding;2.89381428250351e-15!GO:0050794;regulation of cellular process;4.28423179948221e-15!GO:0009057;macromolecule catabolic process;4.51745156076128e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;5.87392724082047e-15!GO:0000375;RNA splicing, via transesterification reactions;5.87392724082047e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;5.87392724082047e-15!GO:0008135;translation factor activity, nucleic acid binding;6.18908405851341e-15!GO:0006325;establishment and/or maintenance of chromatin architecture;6.48482389647958e-15!GO:0012505;endomembrane system;9.19535409214761e-15!GO:0000502;proteasome complex (sensu Eukaryota);1.10761738424405e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.54435939766456e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.31230209350489e-14!GO:0051276;chromosome organization and biogenesis;2.39237728263708e-14!GO:0006281;DNA repair;2.56850026198013e-14!GO:0006323;DNA packaging;2.64727635196217e-14!GO:0043412;biopolymer modification;2.64924268068006e-14!GO:0019222;regulation of metabolic process;3.00810811546436e-14!GO:0006605;protein targeting;4.62319936721309e-14!GO:0008219;cell death;5.13268136088331e-14!GO:0016265;death;5.13268136088331e-14!GO:0016607;nuclear speck;7.92202371419359e-14!GO:0030163;protein catabolic process;9.29291439423484e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.15277778827792e-13!GO:0005635;nuclear envelope;1.61935708728699e-13!GO:0050136;NADH dehydrogenase (quinone) activity;1.7123428494505e-13!GO:0003954;NADH dehydrogenase activity;1.7123428494505e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.7123428494505e-13!GO:0044248;cellular catabolic process;2.38005296959614e-13!GO:0032553;ribonucleotide binding;2.67821255771251e-13!GO:0032555;purine ribonucleotide binding;2.67821255771251e-13!GO:0005761;mitochondrial ribosome;4.65499263390992e-13!GO:0000313;organellar ribosome;4.65499263390992e-13!GO:0031965;nuclear membrane;5.16722133849535e-13!GO:0016887;ATPase activity;7.0764757068525e-13!GO:0031323;regulation of cellular metabolic process;7.67822374967092e-13!GO:0006413;translational initiation;1.13991153618278e-12!GO:0017076;purine nucleotide binding;1.34464209336482e-12!GO:0003712;transcription cofactor activity;1.48335118886295e-12!GO:0042254;ribosome biogenesis and assembly;1.91284707305796e-12!GO:0042775;organelle ATP synthesis coupled electron transport;2.80384828817258e-12!GO:0042773;ATP synthesis coupled electron transport;2.80384828817258e-12!GO:0042623;ATPase activity, coupled;3.98307298452253e-12!GO:0005694;chromosome;5.11680976681348e-12!GO:0006446;regulation of translational initiation;5.13890540781625e-12!GO:0006464;protein modification process;7.09414764767988e-12!GO:0030964;NADH dehydrogenase complex (quinone);8.93755756996691e-12!GO:0045271;respiratory chain complex I;8.93755756996691e-12!GO:0005747;mitochondrial respiratory chain complex I;8.93755756996691e-12!GO:0005524;ATP binding;1.51446010656537e-11!GO:0003743;translation initiation factor activity;1.87056647716676e-11!GO:0006350;transcription;2.39950732056331e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.66253628913355e-11!GO:0032559;adenyl ribonucleotide binding;3.77147644999188e-11!GO:0006913;nucleocytoplasmic transport;6.41231497268691e-11!GO:0007049;cell cycle;6.41449788902194e-11!GO:0044453;nuclear membrane part;7.82380929929111e-11!GO:0010468;regulation of gene expression;7.84897941986092e-11!GO:0043687;post-translational protein modification;1.00376509792393e-10!GO:0051169;nuclear transport;1.00985657343028e-10!GO:0048770;pigment granule;1.0100017809992e-10!GO:0042470;melanosome;1.0100017809992e-10!GO:0009719;response to endogenous stimulus;1.55669405214227e-10!GO:0044427;chromosomal part;1.93192044505208e-10!GO:0004386;helicase activity;1.98944330181297e-10!GO:0042981;regulation of apoptosis;2.04294171863435e-10!GO:0030554;adenyl nucleotide binding;2.3199318872898e-10!GO:0008639;small protein conjugating enzyme activity;2.68094253508716e-10!GO:0016568;chromatin modification;2.94863535045373e-10!GO:0043067;regulation of programmed cell death;3.00929813028758e-10!GO:0006333;chromatin assembly or disassembly;3.2758714980386e-10!GO:0004842;ubiquitin-protein ligase activity;4.05856180431653e-10!GO:0051082;unfolded protein binding;4.4931510047344e-10!GO:0051186;cofactor metabolic process;4.9339960077395e-10!GO:0065004;protein-DNA complex assembly;7.49586456238179e-10!GO:0006403;RNA localization;7.54002091434218e-10!GO:0050657;nucleic acid transport;7.94012460417309e-10!GO:0051236;establishment of RNA localization;7.94012460417309e-10!GO:0050658;RNA transport;7.94012460417309e-10!GO:0050789;regulation of biological process;8.26001219751811e-10!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;8.97332571653758e-10!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.00529928482033e-09!GO:0005643;nuclear pore;1.04558215584061e-09!GO:0016192;vesicle-mediated transport;1.24292033627699e-09!GO:0048193;Golgi vesicle transport;1.28134038621285e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.46685573170107e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.56468277905333e-09!GO:0008026;ATP-dependent helicase activity;1.76077158664723e-09!GO:0015078;hydrogen ion transmembrane transporter activity;1.80253247337426e-09!GO:0003713;transcription coactivator activity;2.00292841395142e-09!GO:0005794;Golgi apparatus;2.35610856695459e-09!GO:0019787;small conjugating protein ligase activity;2.55677722331234e-09!GO:0019829;cation-transporting ATPase activity;3.40150582820131e-09!GO:0006399;tRNA metabolic process;3.65913549533793e-09!GO:0005783;endoplasmic reticulum;3.98513822686283e-09!GO:0008270;zinc ion binding;5.26113216132252e-09!GO:0016072;rRNA metabolic process;5.37301234339467e-09!GO:0008565;protein transporter activity;5.75656837132067e-09!GO:0006364;rRNA processing;6.2035601319724e-09!GO:0065002;intracellular protein transport across a membrane;6.55478153855497e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;8.93179634970708e-09!GO:0009259;ribonucleotide metabolic process;1.03655418215013e-08!GO:0022402;cell cycle process;1.35394194477266e-08!GO:0044432;endoplasmic reticulum part;1.39328575160554e-08!GO:0032774;RNA biosynthetic process;1.63334376239454e-08!GO:0006351;transcription, DNA-dependent;2.09329545633997e-08!GO:0043566;structure-specific DNA binding;2.26359477906439e-08!GO:0017038;protein import;2.29389422828984e-08!GO:0006164;purine nucleotide biosynthetic process;2.58371878007375e-08!GO:0030532;small nuclear ribonucleoprotein complex;2.58381694951603e-08!GO:0009260;ribonucleotide biosynthetic process;2.59716263697782e-08!GO:0051028;mRNA transport;2.72242178200481e-08!GO:0005839;proteasome core complex (sensu Eukaryota);2.84717267863046e-08!GO:0045449;regulation of transcription;2.84717267863046e-08!GO:0006732;coenzyme metabolic process;2.9863488852911e-08!GO:0006163;purine nucleotide metabolic process;3.59112011259621e-08!GO:0046930;pore complex;3.70763368428495e-08!GO:0015986;ATP synthesis coupled proton transport;3.74705958823608e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.74705958823608e-08!GO:0000785;chromatin;4.13620324217622e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.14055024084299e-08!GO:0006366;transcription from RNA polymerase II promoter;6.43907566273505e-08!GO:0009152;purine ribonucleotide biosynthetic process;6.88340014163012e-08!GO:0005768;endosome;7.82061734971556e-08!GO:0004298;threonine endopeptidase activity;8.41156266714665e-08!GO:0009150;purine ribonucleotide metabolic process;1.00861513429633e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.01467868322516e-07!GO:0016787;hydrolase activity;1.24094769235255e-07!GO:0016881;acid-amino acid ligase activity;1.89822576299739e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.00765794517718e-07!GO:0000245;spliceosome assembly;2.03331297590567e-07!GO:0051726;regulation of cell cycle;2.10092674755837e-07!GO:0051246;regulation of protein metabolic process;2.11241982492834e-07!GO:0000074;regulation of progression through cell cycle;2.65531285812755e-07!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.77747358068416e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.80570169283293e-07!GO:0016469;proton-transporting two-sector ATPase complex;2.85561254750592e-07!GO:0009060;aerobic respiration;3.17085429587472e-07!GO:0006754;ATP biosynthetic process;3.25491015584229e-07!GO:0006753;nucleoside phosphate metabolic process;3.25491015584229e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;3.42006402951128e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;3.43307114870931e-07!GO:0005789;endoplasmic reticulum membrane;3.54200104921702e-07!GO:0016563;transcription activator activity;3.57664558144579e-07!GO:0009142;nucleoside triphosphate biosynthetic process;4.47344433932471e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.47344433932471e-07!GO:0046914;transition metal ion binding;4.47344433932471e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;4.93867056603058e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;4.93867056603058e-07!GO:0003697;single-stranded DNA binding;7.49512487415953e-07!GO:0006793;phosphorus metabolic process;8.37954919981508e-07!GO:0006796;phosphate metabolic process;8.37954919981508e-07!GO:0009056;catabolic process;9.35907686095659e-07!GO:0006355;regulation of transcription, DNA-dependent;1.1464894874366e-06!GO:0006260;DNA replication;1.17495448194563e-06!GO:0006461;protein complex assembly;1.21076570571105e-06!GO:0032446;protein modification by small protein conjugation;1.39138993837542e-06!GO:0007243;protein kinase cascade;1.49145117771879e-06!GO:0009199;ribonucleoside triphosphate metabolic process;1.51779807206002e-06!GO:0045333;cellular respiration;1.57908811277883e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.72089335367615e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.72089335367615e-06!GO:0009141;nucleoside triphosphate metabolic process;1.73203473064611e-06!GO:0016779;nucleotidyltransferase activity;1.75946318954224e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.80474319141772e-06!GO:0006334;nucleosome assembly;1.86199790108861e-06!GO:0046034;ATP metabolic process;2.03349606494345e-06!GO:0065007;biological regulation;2.04345369300301e-06!GO:0031497;chromatin assembly;2.3082058434262e-06!GO:0045259;proton-transporting ATP synthase complex;2.32854694933867e-06!GO:0000151;ubiquitin ligase complex;2.53017621190336e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.59961183849447e-06!GO:0003677;DNA binding;2.82495671657276e-06!GO:0009055;electron carrier activity;2.86912755444232e-06!GO:0003724;RNA helicase activity;3.09749676350068e-06!GO:0016310;phosphorylation;3.09936525426597e-06!GO:0016567;protein ubiquitination;3.21277707093409e-06!GO:0043069;negative regulation of programmed cell death;3.9327984497336e-06!GO:0006401;RNA catabolic process;4.00327963621165e-06!GO:0016564;transcription repressor activity;4.0058477760319e-06!GO:0006888;ER to Golgi vesicle-mediated transport;4.18027384210852e-06!GO:0005770;late endosome;4.22561963326432e-06!GO:0031324;negative regulation of cellular metabolic process;4.36370083227776e-06!GO:0065009;regulation of a molecular function;5.62804812836024e-06!GO:0043066;negative regulation of apoptosis;5.63355856054629e-06!GO:0009615;response to virus;6.10100399439704e-06!GO:0051188;cofactor biosynthetic process;6.10100399439704e-06!GO:0006099;tricarboxylic acid cycle;6.82481160709419e-06!GO:0046356;acetyl-CoA catabolic process;6.82481160709419e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.89591068504154e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;7.25772335025548e-06!GO:0004812;aminoacyl-tRNA ligase activity;7.25772335025548e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;7.25772335025548e-06!GO:0006613;cotranslational protein targeting to membrane;7.78448454008103e-06!GO:0048475;coated membrane;8.56831126681408e-06!GO:0030117;membrane coat;8.56831126681408e-06!GO:0006084;acetyl-CoA metabolic process;1.29871131679719e-05!GO:0007005;mitochondrion organization and biogenesis;1.3466596406199e-05!GO:0005773;vacuole;1.3733098025916e-05!GO:0043038;amino acid activation;1.4285779426938e-05!GO:0006418;tRNA aminoacylation for protein translation;1.4285779426938e-05!GO:0043039;tRNA aminoacylation;1.4285779426938e-05!GO:0045786;negative regulation of progression through cell cycle;1.44872791524197e-05!GO:0006417;regulation of translation;1.48549995245966e-05!GO:0016481;negative regulation of transcription;1.54499631452179e-05!GO:0019899;enzyme binding;1.64437877591908e-05!GO:0051170;nuclear import;1.80781943200397e-05!GO:0005793;ER-Golgi intermediate compartment;1.87558130497677e-05!GO:0006916;anti-apoptosis;2.22320179655729e-05!GO:0044440;endosomal part;2.31134223995453e-05!GO:0010008;endosome membrane;2.31134223995453e-05!GO:0000323;lytic vacuole;2.51019367482046e-05!GO:0005764;lysosome;2.51019367482046e-05!GO:0051168;nuclear export;2.77156494007482e-05!GO:0048523;negative regulation of cellular process;2.81938297015928e-05!GO:0006606;protein import into nucleus;2.8653218957741e-05!GO:0030120;vesicle coat;3.07530044881017e-05!GO:0030662;coated vesicle membrane;3.07530044881017e-05!GO:0009117;nucleotide metabolic process;3.45751731884104e-05!GO:0009109;coenzyme catabolic process;4.44410132199357e-05!GO:0006752;group transfer coenzyme metabolic process;4.64503099535837e-05!GO:0043065;positive regulation of apoptosis;4.67808411244582e-05!GO:0009108;coenzyme biosynthetic process;4.75847590127657e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;5.26958219928617e-05!GO:0015399;primary active transmembrane transporter activity;5.26958219928617e-05!GO:0003924;GTPase activity;5.76319382318283e-05!GO:0006402;mRNA catabolic process;6.43516377251298e-05!GO:0006612;protein targeting to membrane;6.97022010087493e-05!GO:0043068;positive regulation of programmed cell death;7.01886186840327e-05!GO:0042613;MHC class II protein complex;7.04458780688003e-05!GO:0005813;centrosome;7.42646764645182e-05!GO:0000278;mitotic cell cycle;7.6046569744559e-05!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;7.6046569744559e-05!GO:0016740;transferase activity;7.61646377795155e-05!GO:0008186;RNA-dependent ATPase activity;7.827567581753e-05!GO:0051187;cofactor catabolic process;8.0539858550268e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;9.35645788336176e-05!GO:0044431;Golgi apparatus part;0.000110795429779784!GO:0005667;transcription factor complex;0.000129153575086137!GO:0003690;double-stranded DNA binding;0.000134793601053727!GO:0031326;regulation of cellular biosynthetic process;0.000136217402320926!GO:0006917;induction of apoptosis;0.000137589593455883!GO:0005762;mitochondrial large ribosomal subunit;0.000157977259744734!GO:0000315;organellar large ribosomal subunit;0.000157977259744734!GO:0031072;heat shock protein binding;0.000168981474254034!GO:0016197;endosome transport;0.000186943067142392!GO:0000314;organellar small ribosomal subunit;0.000195858110089734!GO:0005763;mitochondrial small ribosomal subunit;0.000195858110089734!GO:0012502;induction of programmed cell death;0.00019636968858605!GO:0009892;negative regulation of metabolic process;0.000205773164737197!GO:0008033;tRNA processing;0.000213751454091829!GO:0005885;Arp2/3 protein complex;0.000235197704054978!GO:0004004;ATP-dependent RNA helicase activity;0.00025002473587095!GO:0005815;microtubule organizing center;0.000257047446177375!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000284002574129593!GO:0000786;nucleosome;0.000292371841902086!GO:0008234;cysteine-type peptidase activity;0.00029996274643828!GO:0006818;hydrogen transport;0.000303537820663162!GO:0043021;ribonucleoprotein binding;0.000330567227005106!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000335960655869096!GO:0015992;proton transport;0.000342731704167339!GO:0003714;transcription corepressor activity;0.000342731704167339!GO:0016251;general RNA polymerase II transcription factor activity;0.00035043775276303!GO:0008654;phospholipid biosynthetic process;0.000401325222101158!GO:0022890;inorganic cation transmembrane transporter activity;0.000409675343619969!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000421183982280487!GO:0008632;apoptotic program;0.00044347311455095!GO:0043681;protein import into mitochondrion;0.000445072190959288!GO:0005525;GTP binding;0.00044558875608713!GO:0042113;B cell activation;0.000445853261924796!GO:0006310;DNA recombination;0.00044958195781337!GO:0003899;DNA-directed RNA polymerase activity;0.000466420247661805!GO:0006352;transcription initiation;0.000492439203766641!GO:0006261;DNA-dependent DNA replication;0.000554359918274994!GO:0048519;negative regulation of biological process;0.000563836480426234!GO:0043492;ATPase activity, coupled to movement of substances;0.000589985556703421!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000602433981717445!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00060734618411823!GO:0016363;nuclear matrix;0.000652213578572262!GO:0000087;M phase of mitotic cell cycle;0.000674360748421568!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0007352387163338!GO:0008168;methyltransferase activity;0.000747414986017125!GO:0050790;regulation of catalytic activity;0.000762153538885171!GO:0007242;intracellular signaling cascade;0.000773952873985191!GO:0016741;transferase activity, transferring one-carbon groups;0.000774407613516858!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.000807670308050899!GO:0030384;phosphoinositide metabolic process;0.000819874255029465!GO:0003729;mRNA binding;0.000820593668229373!GO:0051427;hormone receptor binding;0.000838055395768574!GO:0009889;regulation of biosynthetic process;0.00086164274224314!GO:0007264;small GTPase mediated signal transduction;0.000876433165257949!GO:0043623;cellular protein complex assembly;0.000933325098229885!GO:0007067;mitosis;0.000943299381841832!GO:0031902;late endosome membrane;0.000991753254015156!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00100467795898172!GO:0051301;cell division;0.00107404298826297!GO:0004518;nuclease activity;0.00107992741374114!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00108135337615944!GO:0003711;transcription elongation regulator activity;0.00109649663181517!GO:0009967;positive regulation of signal transduction;0.00115794840198124!GO:0006950;response to stress;0.00122558618821104!GO:0022403;cell cycle phase;0.00127031850052085!GO:0051252;regulation of RNA metabolic process;0.00139765993102103!GO:0035257;nuclear hormone receptor binding;0.00144254064155095!GO:0043488;regulation of mRNA stability;0.00148027847183405!GO:0043487;regulation of RNA stability;0.00148027847183405!GO:0045892;negative regulation of transcription, DNA-dependent;0.00155543665175134!GO:0006383;transcription from RNA polymerase III promoter;0.00157681984869361!GO:0005048;signal sequence binding;0.00157681984869361!GO:0004527;exonuclease activity;0.0016925972613142!GO:0005798;Golgi-associated vesicle;0.0016925972613142!GO:0005769;early endosome;0.0017315291404331!GO:0007034;vacuolar transport;0.00174703747380618!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00186133356150736!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00190413737344813!GO:0015002;heme-copper terminal oxidase activity;0.00190413737344813!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00190413737344813!GO:0004129;cytochrome-c oxidase activity;0.00190413737344813!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00190413737344813!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00190413737344813!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00190413737344813!GO:0048500;signal recognition particle;0.00200762292406555!GO:0048471;perinuclear region of cytoplasm;0.00205365330266677!GO:0031252;leading edge;0.00207043404993472!GO:0009165;nucleotide biosynthetic process;0.00221933761450162!GO:0046489;phosphoinositide biosynthetic process;0.00232034568339379!GO:0044452;nucleolar part;0.00257696895138327!GO:0006405;RNA export from nucleus;0.00273240855823337!GO:0048522;positive regulation of cellular process;0.00278946657275146!GO:0007006;mitochondrial membrane organization and biogenesis;0.00289499482355384!GO:0046474;glycerophospholipid biosynthetic process;0.00289499482355384!GO:0032561;guanyl ribonucleotide binding;0.00290733018957863!GO:0019001;guanyl nucleotide binding;0.00290733018957863!GO:0005637;nuclear inner membrane;0.00292865552307517!GO:0043087;regulation of GTPase activity;0.00303740720383195!GO:0004532;exoribonuclease activity;0.00312074040099892!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00312074040099892!GO:0008312;7S RNA binding;0.00312503791000268!GO:0008047;enzyme activator activity;0.00318914486546361!GO:0006414;translational elongation;0.00322106955223099!GO:0005774;vacuolar membrane;0.00340721413654481!GO:0006650;glycerophospholipid metabolic process;0.00344297348918784!GO:0000139;Golgi membrane;0.00346334852137812!GO:0005684;U2-dependent spliceosome;0.00375933147947912!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00375933147947912!GO:0045047;protein targeting to ER;0.00375933147947912!GO:0030433;ER-associated protein catabolic process;0.00390848763723653!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.00390848763723653!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00390848763723653!GO:0007265;Ras protein signal transduction;0.00393493530593756!GO:0003725;double-stranded RNA binding;0.0040108280665222!GO:0016859;cis-trans isomerase activity;0.00402965258103427!GO:0006891;intra-Golgi vesicle-mediated transport;0.00428746567024433!GO:0008408;3'-5' exonuclease activity;0.00439361786119535!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00444152466902448!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00444152466902448!GO:0006289;nucleotide-excision repair;0.00452507484987147!GO:0051336;regulation of hydrolase activity;0.00462133224028959!GO:0051920;peroxiredoxin activity;0.00467654627336397!GO:0006839;mitochondrial transport;0.00467654627336397!GO:0030118;clathrin coat;0.00493120953842976!GO:0030518;steroid hormone receptor signaling pathway;0.00505723961751764!GO:0033116;ER-Golgi intermediate compartment membrane;0.00514315305800479!GO:0045454;cell redox homeostasis;0.00544105155028245!GO:0005741;mitochondrial outer membrane;0.00550434934669453!GO:0016584;nucleosome positioning;0.0055174706748919!GO:0019783;small conjugating protein-specific protease activity;0.00564257803382117!GO:0004674;protein serine/threonine kinase activity;0.00568910613056901!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00589122091426545!GO:0000279;M phase;0.00593278320597595!GO:0032259;methylation;0.00598493493378137!GO:0031625;ubiquitin protein ligase binding;0.00611631395002272!GO:0006302;double-strand break repair;0.0064925899314455!GO:0043414;biopolymer methylation;0.00666969304462153!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00670036539277954!GO:0006626;protein targeting to mitochondrion;0.00676975311104449!GO:0004843;ubiquitin-specific protease activity;0.00689427478062847!GO:0045947;negative regulation of translational initiation;0.00704371709200553!GO:0051789;response to protein stimulus;0.00704371709200553!GO:0006986;response to unfolded protein;0.00704371709200553!GO:0044437;vacuolar part;0.00725740293052569!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00729735493040502!GO:0042802;identical protein binding;0.0075336992690207!GO:0006367;transcription initiation from RNA polymerase II promoter;0.00765649920815296!GO:0005765;lysosomal membrane;0.00783908000700812!GO:0005669;transcription factor TFIID complex;0.00860238922956777!GO:0046649;lymphocyte activation;0.0093358348222694!GO:0006611;protein export from nucleus;0.00937735550932563!GO:0032940;secretion by cell;0.00941066953231943!GO:0031968;organelle outer membrane;0.00946427570669428!GO:0045045;secretory pathway;0.00946427570669428!GO:0000118;histone deacetylase complex;0.00947167860506911!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00998814961154482!GO:0030119;AP-type membrane coat adaptor complex;0.0100155649085152!GO:0002376;immune system process;0.0100577954521474!GO:0060090;molecular adaptor activity;0.0102664274949634!GO:0016605;PML body;0.0103981570817975!GO:0007041;lysosomal transport;0.0106787307751446!GO:0030658;transport vesicle membrane;0.0106787307751446!GO:0019867;outer membrane;0.0107024528936038!GO:0006376;mRNA splice site selection;0.0107402150472029!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0107402150472029!GO:0005657;replication fork;0.010844315262504!GO:0031901;early endosome membrane;0.0111723177898726!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0111852730036102!GO:0015630;microtubule cytoskeleton;0.0112596218814924!GO:0046467;membrane lipid biosynthetic process;0.0114705280478713!GO:0000178;exosome (RNase complex);0.0115354750479371!GO:0030258;lipid modification;0.0116348513256338!GO:0030041;actin filament polymerization;0.0116861786285171!GO:0015923;mannosidase activity;0.0119738952450609!GO:0004221;ubiquitin thiolesterase activity;0.0119738952450609!GO:0030867;rough endoplasmic reticulum membrane;0.0120095945440039!GO:0051087;chaperone binding;0.0120214509708136!GO:0016272;prefoldin complex;0.0121309397008968!GO:0002764;immune response-regulating signal transduction;0.0125670660738823!GO:0016853;isomerase activity;0.012577054464996!GO:0030663;COPI coated vesicle membrane;0.0125781730555369!GO:0030126;COPI vesicle coat;0.0125781730555369!GO:0030137;COPI-coated vesicle;0.0126293016945233!GO:0030131;clathrin adaptor complex;0.0128864818214094!GO:0018193;peptidyl-amino acid modification;0.0132364244762671!GO:0003746;translation elongation factor activity;0.0132925465965052!GO:0009116;nucleoside metabolic process;0.0137438007785645!GO:0003678;DNA helicase activity;0.0138218968973241!GO:0006607;NLS-bearing substrate import into nucleus;0.0140145019204278!GO:0031982;vesicle;0.0146104319859341!GO:0030521;androgen receptor signaling pathway;0.0147688324991273!GO:0009451;RNA modification;0.0148610373802201!GO:0032200;telomere organization and biogenesis;0.0148666233408968!GO:0000723;telomere maintenance;0.0148666233408968!GO:0030695;GTPase regulator activity;0.015338884948603!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0155365318316734!GO:0030880;RNA polymerase complex;0.0157911717579097!GO:0048002;antigen processing and presentation of peptide antigen;0.016501172896958!GO:0051539;4 iron, 4 sulfur cluster binding;0.016617842932396!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.0167777249545479!GO:0006284;base-excision repair;0.017024725040132!GO:0000049;tRNA binding;0.0181842272598188!GO:0000119;mediator complex;0.0186789753732048!GO:0000175;3'-5'-exoribonuclease activity;0.0188158255510225!GO:0043281;regulation of caspase activity;0.0188860043039142!GO:0015980;energy derivation by oxidation of organic compounds;0.0189613787419892!GO:0006091;generation of precursor metabolites and energy;0.0189613787419892!GO:0015631;tubulin binding;0.019052586390187!GO:0019882;antigen processing and presentation;0.0196154832469816!GO:0051052;regulation of DNA metabolic process;0.0198362470571866!GO:0006672;ceramide metabolic process;0.0198362470571866!GO:0046128;purine ribonucleoside metabolic process;0.020086648126!GO:0042278;purine nucleoside metabolic process;0.020086648126!GO:0019883;antigen processing and presentation of endogenous antigen;0.0201702490858586!GO:0008139;nuclear localization sequence binding;0.0208123441036018!GO:0032395;MHC class II receptor activity;0.0209012055336392!GO:0006595;polyamine metabolic process;0.0209220688182611!GO:0006919;caspase activation;0.0212888440058964!GO:0008097;5S rRNA binding;0.0215528742167189!GO:0004197;cysteine-type endopeptidase activity;0.0217500199058296!GO:0003684;damaged DNA binding;0.0218243530654308!GO:0051540;metal cluster binding;0.0219170058279468!GO:0051536;iron-sulfur cluster binding;0.0219170058279468!GO:0030660;Golgi-associated vesicle membrane;0.0220378420480634!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0229817700421518!GO:0046966;thyroid hormone receptor binding;0.0230425242019098!GO:0045321;leukocyte activation;0.0230425242019098!GO:0048518;positive regulation of biological process;0.0232626041793218!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0241079447500556!GO:0000738;DNA catabolic process, exonucleolytic;0.0246481848819615!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0248768475543291!GO:0030522;intracellular receptor-mediated signaling pathway;0.0251014895709111!GO:0006338;chromatin remodeling;0.0254178559728981!GO:0005832;chaperonin-containing T-complex;0.025426569598904!GO:0050871;positive regulation of B cell activation;0.025426569598904!GO:0005869;dynactin complex;0.0259263581394905!GO:0043022;ribosome binding;0.0259403634618196!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0259958202854731!GO:0000209;protein polyubiquitination;0.0268100747784682!GO:0045730;respiratory burst;0.0268375994947255!GO:0048487;beta-tubulin binding;0.0269875792136674!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.027037832234936!GO:0019843;rRNA binding;0.027037832234936!GO:0002757;immune response-activating signal transduction;0.027037832234936!GO:0004540;ribonuclease activity;0.0272520279344035!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0274319309509218!GO:0000428;DNA-directed RNA polymerase complex;0.0274319309509218!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0275203590171866!GO:0005521;lamin binding;0.0277811414975313!GO:0031988;membrane-bound vesicle;0.028251803498294!GO:0022415;viral reproductive process;0.0285205745868307!GO:0047485;protein N-terminus binding;0.028612734352112!GO:0006914;autophagy;0.0289595683331348!GO:0006506;GPI anchor biosynthetic process;0.0292597221724696!GO:0016790;thiolester hydrolase activity;0.0293077242418878!GO:0051098;regulation of binding;0.0302621186005466!GO:0008180;signalosome;0.0304031876903536!GO:0019814;immunoglobulin complex;0.0304173878827569!GO:0019815;B cell receptor complex;0.0304173878827569!GO:0003682;chromatin binding;0.0313848740708027!GO:0004722;protein serine/threonine phosphatase activity;0.032195415922!GO:0000287;magnesium ion binding;0.0324460670320986!GO:0000059;protein import into nucleus, docking;0.0326747639884565!GO:0008017;microtubule binding;0.0331901003757769!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0334123262623579!GO:0002483;antigen processing and presentation of endogenous peptide antigen;0.0334123262623579!GO:0019885;antigen processing and presentation of endogenous peptide antigen via MHC class I;0.0334123262623579!GO:0032318;regulation of Ras GTPase activity;0.0335769082528939!GO:0031410;cytoplasmic vesicle;0.0340367966578051!GO:0051092;activation of NF-kappaB transcription factor;0.034170306766389!GO:0009119;ribonucleoside metabolic process;0.0345290027073439!GO:0008287;protein serine/threonine phosphatase complex;0.0347187722841507!GO:0005819;spindle;0.0352690524939652!GO:0004576;oligosaccharyl transferase activity;0.035491125081327!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.0357131828367857!GO:0050853;B cell receptor signaling pathway;0.0358484176665849!GO:0006497;protein amino acid lipidation;0.0362204712949971!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0364399507396562!GO:0007050;cell cycle arrest;0.0364682491966021!GO:0043280;positive regulation of caspase activity;0.0365949361754547!GO:0051090;regulation of transcription factor activity;0.0367089820814183!GO:0035258;steroid hormone receptor binding;0.0376026718252574!GO:0042824;MHC class I peptide loading complex;0.0381379315348324!GO:0005070;SH3/SH2 adaptor activity;0.0381836810046587!GO:0030176;integral to endoplasmic reticulum membrane;0.0386619017178745!GO:0008538;proteasome activator activity;0.0387089776711153!GO:0009607;response to biotic stimulus;0.0395814050597319!GO:0008276;protein methyltransferase activity;0.0395814050597319!GO:0007004;telomere maintenance via telomerase;0.0398698340798592!GO:0031647;regulation of protein stability;0.0400086758740437!GO:0000303;response to superoxide;0.040622509617901!GO:0005784;translocon complex;0.0421071310401105!GO:0008250;oligosaccharyl transferase complex;0.0421764718092789!GO:0001726;ruffle;0.0422881695920783!GO:0000339;RNA cap binding;0.0429840768622324!GO:0042611;MHC protein complex;0.0435696110928018!GO:0005850;eukaryotic translation initiation factor 2 complex;0.044100620121122!GO:0046519;sphingoid metabolic process;0.0441208923347897!GO:0043550;regulation of lipid kinase activity;0.0441703531873967!GO:0000726;non-recombinational repair;0.0441990245971262!GO:0006406;mRNA export from nucleus;0.0443740676377452!GO:0006516;glycoprotein catabolic process;0.0451320167748584!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0451752642608792!GO:0010257;NADH dehydrogenase complex assembly;0.0451752642608792!GO:0033108;mitochondrial respiratory chain complex assembly;0.0451752642608792!GO:0050851;antigen receptor-mediated signaling pathway;0.0459978476626612!GO:0022406;membrane docking;0.046002370048675!GO:0048278;vesicle docking;0.046002370048675!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0464966890830888!GO:0000123;histone acetyltransferase complex;0.0469892453538951!GO:0045603;positive regulation of endothelial cell differentiation;0.0475403131119397!GO:0006354;RNA elongation;0.0478741836460048!GO:0030097;hemopoiesis;0.0478741836460048!GO:0046979;TAP2 binding;0.0479765261134905!GO:0046977;TAP binding;0.0479765261134905!GO:0046978;TAP1 binding;0.0479765261134905!GO:0004003;ATP-dependent DNA helicase activity;0.0482365726452178!GO:0030133;transport vesicle;0.0482680190604638!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0483441151976818!GO:0046854;phosphoinositide phosphorylation;0.0485922265990926!GO:0030833;regulation of actin filament polymerization;0.0490637754654831!GO:0007040;lysosome organization and biogenesis;0.0494042462402242!GO:0051059;NF-kappaB binding;0.0495042866904657!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0495042866904657!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0495679919900706
 |sample_id=12204
 |sample_note=
@@ Line 76: / Line 100: @@
 |sample_tissue=blood
 |top_motifs=POU5F1:3.23867355094;POU2F1..3:3.06170220543;FOXA2:2.09631288504;ELF1,2,4:2.03039651747;PBX1:1.87372307149;DMAP1_NCOR{1,2}_SMARC:1.80806724204;FOX{F1,F2,J1}:1.66299424375;FOX{I1,J2}:1.65764101279;ELK1,4_GABP{A,B1}:1.57304932108;TLX2:1.50743612487;SPI1:1.50579581798;AIRE:1.47690763075;IRF1,2:1.45927244149;FOX{D1,D2}:1.39136629708;FOXO1,3,4:1.38409976525;SPIB:1.362699924;ETS1,2:1.32721895812;STAT1,3:1.29036367302;CRX:1.23564331894;PAX6:1.19008309601;RUNX1..3:1.18941849491;BPTF:1.14746280484;FOXN1:1.12638681216;ALX1:1.09421236636;NFKB1_REL_RELA:1.07736069286;RFX2..5_RFXANK_RFXAP:0.98574593762;NANOG{mouse}:0.967472021535;YY1:0.898802041684;VSX1,2:0.855324966672;HBP1_HMGB_SSRP1_UBTF:0.805966811795;LMO2:0.737501416948;OCT4_SOX2{dimer}:0.706393581527;IRF7:0.695113109476;ATF5_CREB3:0.653336265174;PDX1:0.652566160824;NKX2-2,8:0.622719062795;RORA:0.551233268651;ATF2:0.539049842704;GATA6:0.538289500855;CREB1:0.532616706301;ZEB1:0.528995568799;BREu{core}:0.49749805899;FOXP3:0.492509251655;MYOD1:0.486691701695;HMX1:0.480935489206;PAX3,7:0.462082488285;CDX1,2,4:0.455664504622;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.450912215459;ESR1:0.449383017567;NKX2-1,4:0.447617441301;SNAI1..3:0.442205952915;EP300:0.427421723275;TGIF1:0.420360320413;ZNF143:0.389879112572;MEF2{A,B,C,D}:0.374092373386;SOX5:0.32931871311;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.321085479815;FOXP1:0.300726197777;MYB:0.29638508817;ATF4:0.29291680602;NRF1:0.280189416256;RXRA_VDR{dimer}:0.26837116087;HES1:0.254682391947;HIF1A:0.248386813331;SREBF1,2:0.243484488422;PAX2:0.194352751428;CUX2:0.183737231184;NKX6-1,2:0.179003222109;SOX{8,9,10}:0.154420990333;PRRX1,2:0.0972014957238;STAT5{A,B}:0.0723464504125;ZBTB16:0.0410931591402;NR5A1,2:0.0346085455487;NHLH1,2:0.0134775702161;NFY{A,B,C}:-0.0221641845369;T:-0.0731218430058;NFIX:-0.0917057787523;GLI1..3:-0.0927413499687;TEF:-0.107453961788;FOXQ1:-0.109048036927;AR:-0.143867243109;NFATC1..3:-0.144124204574;ADNP_IRX_SIX_ZHX:-0.149760150338;ATF6:-0.168883959372;ZFP161:-0.176649455254;ZNF148:-0.177063878288;LEF1_TCF7_TCF7L1,2:-0.189964412827;EVI1:-0.197552157964;HAND1,2:-0.201168695733;HOXA9_MEIS1:-0.207813323072;IKZF2:-0.24635277261;NFIL3:-0.256545029723;NANOG:-0.258032018514;GFI1:-0.265589832257;E2F1..5:-0.26583275324;HOX{A6,A7,B6,B7}:-0.276257956309;RBPJ:-0.280894856509;TAL1_TCF{3,4,12}:-0.282589507127;TFAP4:-0.305466114494;ALX4:-0.306373580377;HNF4A_NR2F1,2:-0.309044534414;DBP:-0.330855215049;TOPORS:-0.331560775987;SPZ1:-0.341190864786;ONECUT1,2:-0.34727078934;POU1F1:-0.383995196815;SRF:-0.448168590474;PPARG:-0.448792839208;HNF1A:-0.453790004464;PRDM1:-0.460248438382;CDC5L:-0.471400010728;bHLH_family:-0.476466999775;FOSL2:-0.481253442347;CEBPA,B_DDIT3:-0.504420689619;RFX1:-0.530413773559;AHR_ARNT_ARNT2:-0.540283382979;EBF1:-0.559143481505;NKX2-3_NKX2-5:-0.584537971039;SMAD1..7,9:-0.599546305946;FOS_FOS{B,L1}_JUN{B,D}:-0.603780724743;JUN:-0.607698784134;MYFfamily:-0.608471442978;EGR1..3:-0.60917592269;FOXL1:-0.610541221638;RXR{A,B,G}:-0.62586284865;SOX17:-0.627912346873;TFCP2:-0.643392513409;HOX{A4,D4}:-0.652536513015;XBP1:-0.693266323983;NKX3-2:-0.697178606294;POU6F1:-0.717594159941;HLF:-0.734526248351;ARID5B:-0.749769294112;BACH2:-0.75984698555;NFE2:-0.799301392098;HMGA1,2:-0.805026392699;NR6A1:-0.805364293167;NKX3-1:-0.813412110958;MAFB:-0.829167138234;ZNF238:-0.872914651752;XCPE1{core}:-0.883395259546;TBP:-0.907073228702;EN1,2:-0.909202550953;SOX2:-0.9161914932;REST:-0.91964497924;LHX3,4:-0.9470700003;NR1H4:-0.955221892672;HOX{A5,B5}:-0.966485322611;MTE{core}:-0.970142147049;PAX4:-0.994229630603;GFI1B:-0.999982928031;TBX4,5:-1.00769103095;NFE2L2:-1.02062943018;PATZ1:-1.02203929827;TP53:-1.04870887641;MZF1:-1.07489384854;STAT2,4,6:-1.0759094727;PITX1..3:-1.07636711447;MYBL2:-1.11579316459;MAZ:-1.12644432674;FOXD3:-1.1271996086;ZNF423:-1.12892916216;GATA4:-1.15617939485;RREB1:-1.17497605313;MED-1{core}:-1.22831740008;MTF1:-1.23036728248;NR3C1:-1.27346012753;ZNF384:-1.32031457808;SP1:-1.36405554185;HIC1:-1.38451185211;FOXM1:-1.41351398101;NFE2L1:-1.44609205823;UFEwm:-1.48391591565;TFAP2B:-1.49430703809;PAX8:-1.50272665871;ZBTB6:-1.51445581747;HSF1,2:-1.51975587028;TEAD1:-1.56755708202;GZF1:-1.5757804821;PAX5:-1.59519685005;TFAP2{A,C}:-1.60487253306;GTF2I:-1.60546821618;ESRRA:-1.64841756107;TFDP1:-1.71044605026;ZIC1..3:-1.71400980884;KLF4:-1.7471449261;GTF2A1,2:-1.78316865632;TLX1..3_NFIC{dimer}:-1.9867073936;GCM1,2:-2.10156910416;POU3F1..4:-2.28690164732;PAX1,9:-2.45987480637;IKZF1:-2.49124913853
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12204-129C8;search_select_hide=table117:FF:12204-129C8
 }}

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FF:12204-129C8: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 18:34, 4 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0