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{{f5samples
{{f5samples
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001062,UBERON:0002384
|DRA_sample_Accession=CAGE@SAMD00004765
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000566,CL:0000723,CL:0000738,CL:0000988,CL:0002320,CL:0002371
|accession_numbers=CAGE;DRX007791;DRR008663;DRZ000088;DRZ001473;DRZ011438;DRZ012823
|ancestors_in_disease_facet=DOID:0050686,DOID:0060058,DOID:0060083,DOID:14566,DOID:162,DOID:2531,DOID:4
|ancestors_in_anatomy_facet=
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000219,CL:0000738,CL:0000255
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:2531,DOID:0060058,DOID:14566,DOID:0060083
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100104,FF:0104973
|comment=
|comment=
|created_by=
|created_by=
|creation_date=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|expression_enrichment_score=chr5:133451294..133451310,+!p2@TCF7!2.54!346.55!TCF7;;chr9:77112244..77112262,+!p1@RORB!2.18!165.55!RORB;;chr8:60031619..60031676,-!p1@TOX!2.07!242.80!TOX;;chr1:23857698..23857733,-!p1@E2F2!1.88!133.32!E2F2;;chr6:135502408..135502459,+!p2@MYB!1.83!76.37!MYB;;chr4:109090075..109090095,-!p2@LEF1!1.81!63.57!LEF1;;chr5:133450365..133450444,+!p1@TCF7!1.79!266.20!TCF7;;chr2:214014959..214015006,-!p4@IKZF2!1.79!60.48!IKZF2;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.77!57.83!POU3F3;;chr6:135502501..135502546,+!p1@MYB!1.72!61.36!MYB;;chr10:8096772..8096787,+!p2@GATA3!1.59!44.15!GATA3;;chr3:141868293..141868355,-!p2@TFDP2!1.55!287.39!TFDP2;;chr2:214015111..214015179,-!p1@IKZF2!1.54!59.60!IKZF2;;chr1:935467..935484,-!p1@HES4!1.52!138.18!HES4;;chr21:47063625..47063658,+!p1@PCBP3!1.50!129.35!PCBP3;;chr1:151798546..151798590,-!p2@RORC!1.50!30.46!RORC;;chr5:133451347..133451358,+!p3@TCF7!1.50!30.46!TCF7;;chr4:109087445..109087463,-!p1@LEF1!1.47!28.70!LEF1;;chr14:37131058..37131139,+!p1@PAX9!1.45!26.93!PAX9;;chr3:141747459..141747475,-!p1@TFDP2!1.44!210.58!TFDP2;;chr21:36421535..36421610,-!p2@RUNX1!1.44!92.71!RUNX1;;chr2:102091566..102091581,-!p1@RFX8!1.43!26.05!RFX8;;chr1:92949331..92949377,-!p2@GFI1!1.42!25.16!GFI1;;chr3:63953435..63953499,+!p1@ATXN7!1.41!24.72!ATXN7;;chr13:74708029..74708077,-!p2@KLF12!1.39!65.34!KLF12;;chr5:176738887..176738934,-!p1@MXD3!1.36!143.03!MXD3;;chr7:50343634..50343717,+!p2@IKZF1!1.36!22.07!IKZF1;;chr10:8096631..8096660,+!p1@GATA3!1.29!22.51!GATA3;;chr20:32274179..32274213,-!p1@E2F1!1.28!116.10!E2F1;;chr8:60031682..60031710,-!p2@TOX!1.26!27.81!TOX;;chr7:50344251..50344288,+!p3@IKZF1!1.26!17.22!IKZF1;;chr10:8095593..8095625,+!p3@GATA3!1.24!19.42!GATA3;;chr7:50343895..50343936,+!p5@IKZF1!1.22!15.45!IKZF1;;chr2:60778035..60778060,-!p4@BCL11A!1.21!18.10!BCL11A;;chr2:100759037..100759058,-!p2@AFF3!1.20!15.01!AFF3;;chr2:214015343..214015366,-!p3@IKZF2!1.19!14.57!IKZF2;;chr17:42295777..42295816,-!p7@UBTF!1.18!17.22!UBTF;;chr14:99738138..99738163,-!p1@BCL11B!1.18!14.13!BCL11B;;chr8:60031563..60031574,-!p7@TOX!1.18!14.13!TOX;;chr1:23857674..23857685,-!p3@E2F2!1.18!14.13!E2F2;;chr8:60031534..60031553,-!p8@TOX!1.17!13.69!TOX;;chr2:100759010..100759035,-!p1@AFF3!1.17!13.69!AFF3;;chrY:21906594..21906622,-!p1@KDM5D!1.17!13.69!KDM5D;;chr19:20959098..20959117,+!p1@ZNF66P!1.16!55.62!ZNF66P;;chr9:117150254..117150271,-!p1@AKNA!1.16!36.64!AKNA;;chr19:22034809..22034878,-!p2@ZNF43!1.15!46.35!ZNF43;;chr19:19779619..19779670,+!p1@ZNF101!1.15!37.08!ZNF101;;chr6:20402102..20402152,+!p1@E2F3!1.14!52.09!E2F3;;chr6:91006518..91006570,-!p1@BACH2!1.14!29.58!BACH2;;chr19:20011775..20011800,+!p2@ZNF93!1.14!22.96!ZNF93;;chr19:12163769..12163798,-!p1@ZNF878!1.14!16.78!ZNF878;;chr4:109089901..109089930,-!p3@LEF1!1.14!12.80!LEF1;;chr6:21593973..21593988,+!p1@SOX4!1.13!442.79!SOX4;;chr20:42295713..42295738,+!p2@MYBL2!1.13!73.28!MYBL2;;chr12:24715376..24715432,-!p1@SOX5!1.13!15.89!SOX5;;chr4:109090054..109090073,-!p7@LEF1!1.13!12.36!LEF1;;chr20:42295745..42295765,+!p1@MYBL2!1.12!199.10!MYBL2;;chr5:133450458..133450469,+!p4@TCF7!1.11!11.92!TCF7;;chr2:214013461..214013517,-!p6@IKZF2!1.10!11.48!IKZF2;;chr17:38020392..38020477,-!p1@IKZF3!1.10!11.48!IKZF3;;chr15:57210961..57211012,+!p3@TCF12!1.08!35.76!TCF12;;chr2:60780607..60780624,-!p2@BCL11A!1.07!33.55!BCL11A;;chr19:20150268..20150298,-!p2@ZNF682!1.06!19.87!ZNF682;;chr17:42295682..42295731,-!p17@UBTF!1.06!10.60!UBTF;;chr1:92951607..92951661,-!p1@GFI1!1.06!10.60!GFI1;;chr2:42721205..42721307,+!p4@MTA3!1.05!10.15!MTA3;;chr7:50344289..50344323,+!p1@IKZF1!1.05!10.15!IKZF1;;chr20:32274150..32274166,-!p2@E2F1!1.03!18.54!E2F1;;chr3:141820622..141820635,-!p5@TFDP2!1.03!17.66!TFDP2;;chr14:99737850..99737852,-!p3@BCL11B!1.03!9.71!BCL11B;;chr17:37934204..37934241,-!p3@IKZF3!1.03!9.71!IKZF3;;chr1:158978768..158978800,+!p8@IFI16!1.03!9.71!IFI16;;chr2:60781201..60781258,-!p3@BCL11A!1.01!9.27!BCL11A;;chr4:109089996..109090012,-!p5@LEF1!1.01!9.27!LEF1;;chr1:247171316..247171336,-!p3@ZNF695!1.00!13.69!ZNF695;;chr21:36421147..36421193,-!p10@RUNX1!0.99!8.83!RUNX1;;chr3:141747950..141748004,-!p7@TFDP2!0.99!8.83!TFDP2;;chr17:37934280..37934299,-!p6@IKZF3!0.99!8.83!IKZF3;;chr7:50348268..50348366,+!p4@IKZF1!0.99!8.83!IKZF1;;chr19:19729477..19729542,-!p1@PBX4!0.98!18.54!PBX4;;chr1:93544791..93544807,+!p2@MTF2!0.98!13.24!MTF2;;chr19:21264991..21265026,+!p1@ZNF714!0.97!55.62!ZNF714;;chr1:935398..935465,-!p2@HES4!0.97!17.66!HES4;;chr19:11750566..11750627,+!p1@ZNF833P!0.97!11.48!ZNF833P;;chrX:131624056..131624069,-!p2@MBNL3!0.97!11.48!MBNL3;;chr4:109087906..109087928,-!p12@LEF1!0.97!8.39!LEF1;;chr16:68119324..68119364,+!p1@NFATC3!0.96!37.08!NFATC3;;chr13:41593425..41593480,-!p1@ELF1!0.95!52.53!ELF1;;chr19:20011744..20011770,+!p1@ZNF93!0.95!31.34!ZNF93;;chr7:64126535..64126559,+!p2@ZNF107!0.95!17.22!ZNF107;;chr2:214016254..214016282,-!p7@IKZF2!0.95!7.95!IKZF2;;chr3:141747441..141747452,-!p4@TFDP2!0.94!11.04!TFDP2;;chr3:18486354..18486377,-!p2@SATB1!0.94!9.71!SATB1;;chr6:21597765..21597779,+!p2@SOX4!0.93!63.57!SOX4;;chr8:145669791..145669834,-!p1@TONSL!0.93!22.51!TONSL;;chr21:34144115..34144138,-!p2@GCFC1!0.93!22.51!GCFC1;;chr4:109090106..109090124,-!p10@LEF1!0.93!7.50!LEF1;;chr18:76739816..76739822,+!p1@SALL3!0.93!7.50!SALL3;;chr7:64126503..64126528,+!p1@ZNF107!0.92!54.30!ZNF107;;chr19:23433144..23433204,-!p1@ZNF724P!0.92!33.99!ZNF724P;;chr19:20188776..20188826,+!p1@ZNF90!0.92!20.31!ZNF90;;chr19:21579908..21579949,+!p1@ZNF493!0.91!45.03!ZNF493;;chr19:21106049..21106072,+!p1@ZNF85!0.91!40.61!ZNF85;;chr1:47779762..47779827,-!p1@STIL,p1@TAL1!0.91!33.99!TAL1;;chr7:64023410..64023428,-!p2@ZNF680!0.91!11.48!ZNF680;;chr19:23299814..23299844,+!p1@ZNF730!0.91!8.83!ZNF730;;chr15:76629123..76629151,+!p1@ISL2!0.91!7.95!ISL2;;chr5:133477905..133477956,+!p5@TCF7!0.91!7.06!TCF7;;chr7:44143925..44143970,+!p1@AEBP1!0.90!164.22!AEBP1;;chr17:41277372..41277418,-!p1@BRCA1!0.90!26.49!BRCA1;;chr19:19976683..19976709,+!p1@ZNF253!0.89!31.34!ZNF253;;chr19:19976714..19976729,+!p3@ZNF253!0.89!13.24!ZNF253;;chr1:151032922..151032951,+!p2@MLLT11!0.89!11.48!MLLT11;;chr19:20278012..20278034,+!p1@ZNF486!0.88!58.27!ZNF486;;chr7:148581360..148581425,-!p1@EZH2!0.88!34.43!EZH2;;chr8:80679993..80680011,-!p1@HEY1!0.88!9.71!HEY1;;chr6:135502472..135502489,+!p3@MYB!0.88!6.62!MYB;;chr13:41593493..41593506,-!p8@ELF1!0.88!6.62!ELF1;;chr6:31126291..31126399,+!p1@TCF19!0.87!64.01!TCF19;;chr19:12551785..12551823,-!p1@ZNF443!0.87!10.60!ZNF443;;chr11:128392273..128392308,-!p2@ETS1!0.86!28.25!ETS1;;chr20:47894936..47895010,-!p2@ZNFX1!0.86!21.19!ZNFX1;;chr8:28748099..28748141,+!p2@HMBOX1!0.86!20.31!HMBOX1;;chr19:12444440..12444455,-!p1@ZNF563!0.86!11.04!ZNF563;;chr19:20959142..20959151,+!p2@ZNF66P!0.86!6.18!ZNF66P;;chr12:77459306..77459365,-!p1@E2F7!0.85!81.23!E2F7;;chr3:141868357..141868393,-!p3@TFDP2!0.85!42.38!TFDP2;;chr8:145980968..145980996,-!p2@ZNF251!0.85!9.27!ZNF251;;chr15:56535468..56535521,-!p2@RFX7!0.84!11.48!RFX7;;chr19:21265028..21265052,+!p2@ZNF714!0.84!11.04!ZNF714;;chr6:21597370..21597408,+!p5@SOX4!0.84!9.71!SOX4;;chr1:935496..935509,-!p3@HES4!0.84!9.27!HES4;;chr6:15246261..15246312,+!p1@JARID2!0.83!148.77!JARID2;;chr12:133707204..133707236,+!p1@ZNF10,p2@ZNF268!0.83!34.43!ZNF10;;chr12:66218183..66218209,+!p4@HMGA2!0.83!11.48!HMGA2;;chr20:52226313..52226350,-!p3@ZNF217!0.83!5.74!ZNF217;;chr2:105470714..105470723,+!p@chr2:105470714..105470723,+!0.83!5.74!POU3F3;;chr17:38020557..38020572,-!p4@IKZF3!0.83!5.74!IKZF3;;chr9:77112225..77112238,+!p2@RORB!0.83!5.74!RORB;;chr14:55493763..55493824,-!p1@WDHD1!0.82!45.47!WDHD1;;chr19:1592714..1592762,-!p1@MBD3!0.82!45.47!MBD3;;chr13:41635029..41635044,-!p4@ELF1!0.82!12.36!ELF1;;chr21:34144157..34144175,-!p3@GCFC1!0.82!9.27!GCFC1;;chr15:57211634..57211657,+!p5@TCF12!0.82!8.83!TCF12;;chr16:30596963..30596999,-!p3@ZNF785!0.81!11.48!ZNF785;;chr6:21597514..21597578,+!p4@SOX4!0.81!9.71!SOX4;;chr6:91006575..91006602,-!p2@BACH2!0.81!8.39!BACH2;;chr19:12551824..12551846,-!p2@ZNF443!0.81!7.50!ZNF443;;chr1:149858461..149858479,+!p1@BOLA1!0.80!2258.53!BOLA1;;chr7:64363638..64363667,+!p1@ZNF273!0.80!28.70!ZNF273;;chr19:11959532..11959593,+!p1@ZNF439!0.80!21.63!ZNF439;;chr19:19976634..19976677,+!p2@ZNF253!0.80!20.31!ZNF253;;chr17:37934365..37934387,-!p2@IKZF3!0.80!5.30!IKZF3;;chr13:79177674..79177701,-!p1@POU4F1!0.80!5.30!POU4F1;;chr2:102091144..102091183,-!p2@RFX8!0.80!5.30!RFX8;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!0.80!5.30!POU3F3;;chr2:60780580..60780590,-!p9@BCL11A!0.80!5.30!BCL11A;;chr3:44596664..44596672,+!p2@ZNF167!0.80!5.30!ZNF167;;chr6:15249128..15249177,+!p4@JARID2!0.79!9.71!JARID2;;chr14:75988771..75988826,+!p1@BATF!0.79!7.06!BATF;;chr15:76629097..76629120,+!p2@ISL2!0.78!5.74!ISL2;;chr1:117602932..117602973,+!p1@TTF2!0.77!19.87!TTF2;;chr19:12203100..12203132,+!p1@ZNF788!0.77!10.60!ZNF788;;chrX:84499081..84499115,+!p2@ZNF711!0.77!7.50!ZNF711;;chr8:81398682..81398697,+!p6@ZBTB10!0.77!6.62!ZBTB10;;chr7:50343800..50343811,+!p8@IKZF1!0.77!4.86!IKZF1;;chr3:27763807..27763822,-!p1@EOMES!0.77!4.86!EOMES;;chr4:109086281..109086319,-!p9@LEF1!0.77!4.86!LEF1;;chr4:109088940..109089037,-!p4@LEF1!0.77!4.86!LEF1;;chr12:104531854..104531893,-!p2@NFYB!0.76!18.98!NFYB;;chr9:3525867..3525902,-!p3@RFX3!0.76!17.66!RFX3;;chr19:49140572..49140594,-!p2@DBP!0.76!7.95!DBP;;chr19:9879350..9879419,-!p2@ZNF846!0.75!10.60!ZNF846;;chr1:25256756..25256774,-!p1@RUNX3!0.75!9.27!RUNX3;;chr7:64254834..64254854,+!p2@ZNF138!0.75!8.83!ZNF138;;chr3:44596679..44596726,+!p1@ZNF167!0.74!21.63!ZNF167;;chr19:23869970..23869991,-!p1@ZNF675!0.74!18.98!ZNF675;;chr18:47814010..47814021,-!p3@CXXC1!0.74!7.95!CXXC1;;chr6:21597600..21597664,+!p3@SOX4!0.74!7.95!SOX4;;chr19:10305581..10305646,-!p1@DNMT1!0.73!169.52!DNMT1;;chr19:22018966..22019001,-!p1@ZNF43!0.73!28.25!ZNF43;;chr19:22235279..22235301,+!p1@ZNF257!0.73!8.83!ZNF257;;chr19:37407172..37407217,-!p2@ZNF829!0.73!8.39!ZNF829;;chrX:131623982..131624011,-!p6@MBNL3!0.73!6.62!MBNL3;;chr5:133477868..133477885,+!p13@TCF7!0.73!4.41!TCF7;;chr6:9928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|expression_enrichment_score=chr5:133451294..133451310,+!p2@TCF7!2.54!346.55!TCF7;;chr9:77112244..77112262,+!p1@RORB!2.18!165.55!RORB;;chr8:60031619..60031676,-!p1@TOX!2.07!242.80!TOX;;chr1:23857698..23857733,-!p1@E2F2!1.88!133.32!E2F2;;chr6:135502408..135502459,+!p2@MYB!1.83!76.37!MYB;;chr4:109090075..109090095,-!p2@LEF1!1.81!63.57!LEF1;;chr5:133450365..133450444,+!p1@TCF7!1.79!266.20!TCF7;;chr2:214014959..214015006,-!p4@IKZF2!1.79!60.48!IKZF2;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.77!57.83!POU3F3;;chr6:135502501..135502546,+!p1@MYB!1.72!61.36!MYB;;chr10:8096772..8096787,+!p2@GATA3!1.59!44.15!GATA3;;chr3:141868293..141868355,-!p2@TFDP2!1.55!287.39!TFDP2;;chr2:214015111..214015179,-!p1@IKZF2!1.54!59.60!IKZF2;;chr1:935467..935484,-!p1@HES4!1.52!138.18!HES4;;chr21:47063625..47063658,+!p1@PCBP3!1.50!129.35!PCBP3;;chr1:151798546..151798590,-!p2@RORC!1.50!30.46!RORC;;chr5:133451347..133451358,+!p3@TCF7!1.50!30.46!TCF7;;chr4:109087445..109087463,-!p1@LEF1!1.47!28.70!LEF1;;chr14:37131058..37131139,+!p1@PAX9!1.45!26.93!PAX9;;chr3:141747459..141747475,-!p1@TFDP2!1.44!210.58!TFDP2;;chr21:36421535..36421610,-!p2@RUNX1!1.44!92.71!RUNX1;;chr2:102091566..102091581,-!p1@RFX8!1.43!26.05!RFX8;;chr1:92949331..92949377,-!p2@GFI1!1.42!25.16!GFI1;;chr3:63953435..63953499,+!p1@ATXN7!1.41!24.72!ATXN7;;chr13:74708029..74708077,-!p2@KLF12!1.39!65.34!KLF12;;chr5:176738887..176738934,-!p1@MXD3!1.36!143.03!MXD3;;chr7:50343634..50343717,+!p2@IKZF1!1.36!22.07!IKZF1;;chr10:8096631..8096660,+!p1@GATA3!1.29!22.51!GATA3;;chr20:32274179..32274213,-!p1@E2F1!1.28!116.10!E2F1;;chr8:60031682..60031710,-!p2@TOX!1.26!27.81!TOX;;chr7:50344251..50344288,+!p3@IKZF1!1.26!17.22!IKZF1;;chr10:8095593..8095625,+!p3@GATA3!1.24!19.42!GATA3;;chr7:50343895..50343936,+!p5@IKZF1!1.22!15.45!IKZF1;;chr2:60778035..60778060,-!p4@BCL11A!1.21!18.10!BCL11A;;chr2:100759037..100759058,-!p2@AFF3!1.20!15.01!AFF3;;chr2:214015343..214015366,-!p3@IKZF2!1.19!14.57!IKZF2;;chr17:42295777..42295816,-!p7@UBTF!1.18!17.22!UBTF;;chr14:99738138..99738163,-!p1@BCL11B!1.18!14.13!BCL11B;;chr8:60031563..60031574,-!p7@TOX!1.18!14.13!TOX;;chr1:23857674..23857685,-!p3@E2F2!1.18!14.13!E2F2;;chr8:60031534..60031553,-!p8@TOX!1.17!13.69!TOX;;chr2:100759010..100759035,-!p1@AFF3!1.17!13.69!AFF3;;chrY:21906594..21906622,-!p1@KDM5D!1.17!13.69!KDM5D;;chr19:20959098..20959117,+!p1@ZNF66P!1.16!55.62!ZNF66P;;chr9:117150254..117150271,-!p1@AKNA!1.16!36.64!AKNA;;chr19:22034809..22034878,-!p2@ZNF43!1.15!46.35!ZNF43;;chr19:19779619..19779670,+!p1@ZNF101!1.15!37.08!ZNF101;;chr6:20402102..20402152,+!p1@E2F3!1.14!52.09!E2F3;;chr6:91006518..91006570,-!p1@BACH2!1.14!29.58!BACH2;;chr19:20011775..20011800,+!p2@ZNF93!1.14!22.96!ZNF93;;chr19:12163769..12163798,-!p1@ZNF878!1.14!16.78!ZNF878;;chr4:109089901..109089930,-!p3@LEF1!1.14!12.80!LEF1;;chr6:21593973..21593988,+!p1@SOX4!1.13!442.79!SOX4;;chr20:42295713..42295738,+!p2@MYBL2!1.13!73.28!MYBL2;;chr12:24715376..24715432,-!p1@SOX5!1.13!15.89!SOX5;;chr4:109090054..109090073,-!p7@LEF1!1.13!12.36!LEF1;;chr20:42295745..42295765,+!p1@MYBL2!1.12!199.10!MYBL2;;chr5:133450458..133450469,+!p4@TCF7!1.11!11.92!TCF7;;chr2:214013461..214013517,-!p6@IKZF2!1.10!11.48!IKZF2;;chr17:38020392..38020477,-!p1@IKZF3!1.10!11.48!IKZF3;;chr15:57210961..57211012,+!p3@TCF12!1.08!35.76!TCF12;;chr2:60780607..60780624,-!p2@BCL11A!1.07!33.55!BCL11A;;chr19:20150268..20150298,-!p2@ZNF682!1.06!19.87!ZNF682;;chr17:42295682..42295731,-!p17@UBTF!1.06!10.60!UBTF;;chr1:92951607..92951661,-!p1@GFI1!1.06!10.60!GFI1;;chr2:42721205..42721307,+!p4@MTA3!1.05!10.15!MTA3;;chr7:50344289..50344323,+!p1@IKZF1!1.05!10.15!IKZF1;;chr20:32274150..32274166,-!p2@E2F1!1.03!18.54!E2F1;;chr3:141820622..141820635,-!p5@TFDP2!1.03!17.66!TFDP2;;chr14:99737850..99737852,-!p3@BCL11B!1.03!9.71!BCL11B;;chr17:37934204..37934241,-!p3@IKZF3!1.03!9.71!IKZF3;;chr1:158978768..158978800,+!p8@IFI16!1.03!9.71!IFI16;;chr2:60781201..60781258,-!p3@BCL11A!1.01!9.27!BCL11A;;chr4:109089996..109090012,-!p5@LEF1!1.01!9.27!LEF1;;chr1:247171316..247171336,-!p3@ZNF695!1.00!13.69!ZNF695;;chr21:36421147..36421193,-!p10@RUNX1!0.99!8.83!RUNX1;;chr3:141747950..141748004,-!p7@TFDP2!0.99!8.83!TFDP2;;chr17:37934280..37934299,-!p6@IKZF3!0.99!8.83!IKZF3;;chr7:50348268..50348366,+!p4@IKZF1!0.99!8.83!IKZF1;;chr19:19729477..19729542,-!p1@PBX4!0.98!18.54!PBX4;;chr1:93544791..93544807,+!p2@MTF2!0.98!13.24!MTF2;;chr19:21264991..21265026,+!p1@ZNF714!0.97!55.62!ZNF714;;chr1:935398..935465,-!p2@HES4!0.97!17.66!HES4;;chr19:11750566..11750627,+!p1@ZNF833P!0.97!11.48!ZNF833P;;chrX:131624056..131624069,-!p2@MBNL3!0.97!11.48!MBNL3;;chr4:109087906..109087928,-!p12@LEF1!0.97!8.39!LEF1;;chr16:68119324..68119364,+!p1@NFATC3!0.96!37.08!NFATC3;;chr13:41593425..41593480,-!p1@ELF1!0.95!52.53!ELF1;;chr19:20011744..20011770,+!p1@ZNF93!0.95!31.34!ZNF93;;chr7:64126535..64126559,+!p2@ZNF107!0.95!17.22!ZNF107;;chr2:214016254..214016282,-!p7@IKZF2!0.95!7.95!IKZF2;;chr3:141747441..141747452,-!p4@TFDP2!0.94!11.04!TFDP2;;chr3:18486354..18486377,-!p2@SATB1!0.94!9.71!SATB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3!0.28!11.04!ZNF343;;chr11:123612319..123612395,-!p1@ZNF202!0.28!9.27!ZNF202;;chr2:174830564..174830605,-!p3@SP3!0.28!7.95!SP3;;chr19:36870087..36870110,-!p1@ZFP14!0.28!5.74!ZFP14;;chr1:40997285..40997352,+!p1@ZNF684!0.28!5.30!ZNF684;;chr19:40596789..40596825,-!p2@ZNF780A!0.28!4.41!ZNF780A;;chr1:78444714..78444725,-!p3@FUBP1!0.28!3.97!FUBP1;;chr16:4323015..4323067,-!p2@TFAP4!0.28!3.97!TFAP4;;chr4:87928307..87928321,+!p8@AFF1!0.28!3.09!AFF1;;chr3:71632840..71632857,-!p10@FOXP1!0.28!2.65!FOXP1;;chr18:77867177..77867197,+!p3@ADNP2!0.28!1.77!ADNP2;;chr19:11616645..11616663,-!p1@ZNF653!0.28!1.77!ZNF653;;chr16:29818992..29819023,+!p24@MAZ!0.28!1.32!MAZ;;chr18:45457558..45457570,-!p9@SMAD2!0.28!1.32!SMAD2;;chr3:126194866..126194887,-!p3@ZXDC!0.28!1.32!ZXDC;;chr6:157099113..157099126,+!p9@ARID1B!0.28!1.32!ARID1B;;chr14:58817788..58817805,+!p5@ARID4A!0.28!1.32!ARID4A;;chr13:27998720..27998826,+!p1@GTF3A!0.27!157.60!GTF3A;;chr3:183415558..183415649,+!p1@YEATS2!0.27!44.15!YEATS2;;chr2:169312725..169312810,+!p1@CERS6!0.27!41.06!CERS6;;chr19:45971246..45971265,+!p1@FOSB!0.27!31.34!FOSB;;chr17:65821603..65821635,+!p1@BPTF!0.27!27.81!BPTF;;chr19:8579030..8579061,-!p1@ZNF414!0.27!26.93!ZNF414;;chr16:31885093..31885165,+!p1@ZNF267!0.27!25.16!ZNF267;;chr12:104531945..104531996,-!p1@NFYB!0.27!22.96!NFYB;;chr14:64970494..64970578,-!p1@ZBTB25!0.27!16.33!ZBTB25;;chr7:77428149..77428220,+!p1@PHTF2!0.27!16.33!PHTF2;;chr1:78148324..78148365,-!p2@ZZZ3!0.27!15.45!ZZZ3;;chr10:38383255..38383324,+!p1@ZNF37A!0.27!15.45!ZNF37A;;chr12:133758072..133758114,+!p1@ZNF268!0.27!14.57!ZNF268;;chr14:102786063..102786112,+!p1@ZNF839!0.27!11.48!ZNF839;;chr5:43120995..43121052,+!p1@ZNF131!0.27!7.95!ZNF131;;chr2:61108650..61108687,+!p2@REL!0.27!7.50!REL;;chr6:27440837..27440912,-!p1@ZNF184!0.27!7.06!ZNF184;;chr16:71496112..71496160,-!p1@ZNF23!0.27!7.06!ZNF23;;chr5:178157651..178157689,-!p1@ZNF354A!0.27!6.18!ZNF354A;;chr17:11900745..11900804,-!p1@ZNF18!0.27!5.74!ZNF18;;chr19:12405645..12405685,-!p1@ZNF44!0.27!5.30!ZNF44;;chr6:108881012..108881034,+!p3@FOXO3!0.27!5.30!FOXO3;;chr18:72922743..72922761,+!p3@TSHZ1!0.27!4.86!TSHZ1;;chr19:37096139..37096170,-!p2@ZNF529!0.27!3.97!ZNF529;;chr6:126102254..126102289,+!p5@NCOA7!0.27!3.97!NCOA7;;chr19:40502938..40502987,+!p1@ZNF546!0.27!3.53!ZNF546;;chr9:97021572..97021615,+!p1@ZNF169!0.27!3.53!ZNF169;;chr11:47235980..47236028,+!p3@DDB2!0.27!3.09!DDB2;;chr7:21467642..21467671,+!p2@SP4!0.27!3.09!SP4;;chr12:57919364..57919394,+!p4@MBD6!0.27!2.65!MBD6;;chr12:72058102..72058127,+!p7@THAP2!0.27!2.21!THAP2;;chr17:42297282..42297300,-!p9@UBTF!0.27!2.21!UBTF;;chr19:21324863..21324874,+!p2@ZNF431!0.27!2.21!ZNF431;;chr3:33482052..33482116,-!p2@UBP1!0.27!1.77!UBP1;;chr1:247095162..247095173,-!p3@AHCTF1!0.27!1.77!AHCTF1;;chr19:58239007..58239016,-!p2@ZNF671!0.27!1.32!ZNF671;;chr19:58281003..58281012,+!p2@ZNF586!0.27!1.32!ZNF586;;chr14:89029323..89029329,+!p4@ZC3H14!0.27!1.32!ZC3H14;;chr13:46577414..46577443,-!p11@ZC3H13!0.27!1.32!ZC3H13;;chrX:48901030..48901050,-!p4@TFE3!0.27!1.32!TFE3;;chrX:131622958..131622978,-!p3@MBNL3!0.27!1.32!MBNL3;;chr22:41697484..41697496,+!p3@ZC3H7B!0.27!1.32!ZC3H7B;;chr7:127032330..127032356,-!p3@ZNF800!0.27!1.32!ZNF800;;chr5:133473746..133473764,+!p12@TCF7!0.27!0.88!TCF7;;chr5:142782862..142782881,-!p11@NR3C1!0.27!0.88!NR3C1;;chr5:142784911..142784925,-!p15@NR3C1!0.27!0.88!NR3C1;;chr5:142814347..142814358,-!p27@NR3C1!0.27!0.88!NR3C1;;chr6:126070748..126070768,+!p2@HEY2!0.27!0.88!HEY2;;chr6:15245752..15245767,+!p14@JARID2!0.27!0.88!JARID2;;chr6:21597687..21597708,+!p14@SOX4!0.27!0.88!SOX4;;chr6:41040905..41040916,+!p4@NFYA!0.27!0.88!NFYA;;chr6:91006629..91006641,-!p4@BACH2!0.27!0.88!BACH2;;chr6:91006740..91006751,-!p6@BACH2!0.27!0.88!BACH2;;chr6:99282570..99282591,+!p4@POU3F2!0.27!0.88!POU3F2;;chr6:99282722..99282737,+!p6@POU3F2!0.27!0.88!POU3F2;;chr7:50343510..50343521,+!p11@IKZF1!0.27!0.88!IKZF1;;chr7:64126496..64126498,+!p3@ZNF107!0.27!0.88!ZNF107;;chr8:123793708..123793723,+!p6@ZHX2!0.27!0.88!ZHX2;;
|ffid_belonging_in_development=CL:0000134
|fonse_cell_line=FF:0100104
|fonse_cell_line=FF:0100104
|fonse_cell_line_closure=FF:0100104
|fonse_cell_line_closure=FF:0100104
Line 35: Line 41:
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/Hodgkin%2527s%2520lymphoma%2520cell%2520line%253aHD-Mar2.CNhs11715.10435-106E3.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/Hodgkin%2527s%2520lymphoma%2520cell%2520line%253aHD-Mar2.CNhs11715.10435-106E3.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/Hodgkin%2527s%2520lymphoma%2520cell%2520line%253aHD-Mar2.CNhs11715.10435-106E3.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/Hodgkin%2527s%2520lymphoma%2520cell%2520line%253aHD-Mar2.CNhs11715.10435-106E3.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/Hodgkin%2527s%2520lymphoma%2520cell%2520line%253aHD-Mar2.CNhs11715.10435-106E3.hg38.nobarcode.ctss.bed.gz
|id=FF:10435-106E3
|id=FF:10435-106E3
|is_a=EFO:0002091;;FF:0000003;;FF:0000210;;FF:0104973
|is_a=EFO:0002091;;FF:0000210;;FF:0104973
|is_obsolete=
|library_id=CNhs11715
|library_id_phase_based=2:CNhs11715
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10435
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10435
|name=Hodgkin's lymphoma cell line:HD-Mar2
|name=Hodgkin's lymphoma cell line:HD-Mar2
|namespace=FANTOM5
|namespace=FANTOM5
Line 42: Line 60:
|profile_cagescan=,,,
|profile_cagescan=,,,
|profile_hcage=CNhs11715,LSID819,release009,COMPLETED
|profile_hcage=CNhs11715,LSID819,release009,COMPLETED
|profile_rnaseq=,,,
|profile_rnaseq=
|profile_srnaseq=,,,
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
|repeat_enrich_byfamily=0,0,0,0,0,0,0,0.114515268119704,0.506141682690719,-0.118558603003605,0.377314370382196,0,0,0,0.158803529189909,0,0,0,0,0,0,0,0.158803529189909,0,-0.153323010348428,0,0,0,0.0794017645949545,0,0.513791075332295,0,0,0.30887241007512,0,0,0,0,0,0,0,0,0,0,0,0,0.116656481243703,0.366308867229522,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,-0.108156333892169,0,0.89552854962674,0,0,0.177489670992994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124365950687632,0,0,0,0,0,0,-0.388512941473307,0,0,0,0.094490468569711,-0.0523938735059595,0,0,0,0,-0.0980353512377064,0.475371968574137,0,0,0,0,0,0,0.158803529189909,0,0,0,0,0,0,0,0,0,0,0.120444819775539,0,0,0,-0.00891337770659462,-0.025277345063574,0,0,0.158803529189909,0,0,0
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|rna_box=106
|rna_box=106
|rna_catalog_number=
|rna_catalog_number=
Line 54: Line 75:
|rna_rin=
|rna_rin=
|rna_sample_type=total RNA
|rna_sample_type=total RNA
|rna_tube_id=106E3
|rna_tube_id=1.06E+05
|rna_weight_ug=5.585
|rna_weight_ug=5.585
|sample_age=
|sample_age=
|sample_category=cell lines
|sample_cell_catalog=RCB1981
|sample_cell_catalog=RCB1981
|sample_cell_line=HD-Mar2
|sample_cell_line=HD-Mar2
Line 69: Line 91:
|sample_ethnicity=
|sample_ethnicity=
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;5.44960047124699e-264!GO:0043227;membrane-bound organelle;9.42861505493341e-248!GO:0043231;intracellular membrane-bound organelle;3.32816419057337e-247!GO:0043226;organelle;1.03994210261263e-230!GO:0043229;intracellular organelle;5.17400013707454e-230!GO:0044422;organelle part;1.53343935820313e-165!GO:0044446;intracellular organelle part;8.51328804678174e-164!GO:0005634;nucleus;4.11039808287303e-150!GO:0044237;cellular metabolic process;8.48764306231183e-130!GO:0005737;cytoplasm;7.43842685190319e-129!GO:0032991;macromolecular complex;7.99099499251127e-124!GO:0044238;primary metabolic process;1.37724007582281e-123!GO:0043170;macromolecule metabolic process;8.68616729739674e-122!GO:0044428;nuclear part;2.85742252700318e-109!GO:0030529;ribonucleoprotein complex;1.43678032424022e-100!GO:0003723;RNA binding;1.85324373891727e-93!GO:0044444;cytoplasmic part;1.1103995833021e-91!GO:0043233;organelle lumen;4.81334374319238e-90!GO:0031974;membrane-enclosed lumen;4.81334374319238e-90!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.58039720319263e-89!GO:0043283;biopolymer metabolic process;7.83790093772969e-89!GO:0006259;DNA metabolic process;3.03055635163649e-75!GO:0010467;gene expression;1.85374608896775e-73!GO:0006396;RNA processing;4.92570325458883e-73!GO:0005739;mitochondrion;1.46240675265973e-69!GO:0003676;nucleic acid binding;4.64909673992406e-64!GO:0043234;protein complex;8.40849028930469e-64!GO:0031981;nuclear lumen;2.40599851369392e-63!GO:0016071;mRNA metabolic process;7.79010469297958e-58!GO:0006412;translation;4.2853243096209e-54!GO:0005840;ribosome;3.64355518817401e-53!GO:0006397;mRNA processing;2.66652920276319e-49!GO:0008380;RNA splicing;1.95585661263728e-48!GO:0005515;protein binding;2.39637528185549e-48!GO:0044429;mitochondrial part;1.92865280744055e-46!GO:0007049;cell cycle;2.25532765495473e-46!GO:0003735;structural constituent of ribosome;6.32195891280008e-46!GO:0019538;protein metabolic process;6.5531939083231e-45!GO:0031967;organelle envelope;1.9650351994184e-43!GO:0031975;envelope;4.28198932474766e-43!GO:0016070;RNA metabolic process;5.93112900032709e-43!GO:0006996;organelle organization and biogenesis;5.93112900032709e-43!GO:0044267;cellular protein metabolic process;1.13404678108284e-42!GO:0005694;chromosome;3.3960027761672e-42!GO:0006974;response to DNA damage stimulus;4.18853968459478e-42!GO:0044260;cellular macromolecule metabolic process;7.50786879594962e-42!GO:0033279;ribosomal subunit;1.36736920874663e-41!GO:0044249;cellular biosynthetic process;3.39269167359436e-41!GO:0005654;nucleoplasm;9.06237864063667e-41!GO:0006281;DNA repair;3.11320319800901e-40!GO:0009059;macromolecule biosynthetic process;3.22362694583637e-39!GO:0016043;cellular component organization and biogenesis;3.54486737460238e-39!GO:0031090;organelle membrane;1.96630991190079e-38!GO:0009058;biosynthetic process;2.00166150485539e-38!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.46727080568199e-38!GO:0022402;cell cycle process;2.96842249531072e-37!GO:0043228;non-membrane-bound organelle;3.68112742296105e-37!GO:0043232;intracellular non-membrane-bound organelle;3.68112742296105e-37!GO:0044427;chromosomal part;5.28875520911376e-37!GO:0005681;spliceosome;1.48336125148219e-35!GO:0065003;macromolecular complex assembly;9.05781983651385e-35!GO:0000278;mitotic cell cycle;1.77311281327851e-34!GO:0033036;macromolecule localization;3.1354641167165e-34!GO:0051276;chromosome organization and biogenesis;9.1839015241224e-33!GO:0000166;nucleotide binding;1.80287411184609e-32!GO:0005829;cytosol;5.66151702737528e-32!GO:0015031;protein transport;6.59306850547583e-32!GO:0022403;cell cycle phase;8.20764153331936e-32!GO:0044451;nucleoplasm part;2.83047691195973e-31!GO:0006260;DNA replication;2.17842988336338e-30!GO:0022607;cellular component assembly;2.43783218111145e-30!GO:0008104;protein localization;9.37559892184339e-30!GO:0046907;intracellular transport;1.01378430817718e-29!GO:0009719;response to endogenous stimulus;1.04800017952158e-29!GO:0045184;establishment of protein localization;4.39621867940622e-29!GO:0000087;M phase of mitotic cell cycle;5.96773065313116e-29!GO:0005830;cytosolic ribosome (sensu Eukaryota);7.50750841049861e-29!GO:0019866;organelle inner membrane;7.97390535249809e-29!GO:0005740;mitochondrial envelope;2.76525109551651e-28!GO:0007067;mitosis;2.76525109551651e-28!GO:0000279;M phase;6.10536632738455e-28!GO:0031966;mitochondrial membrane;3.61419214265715e-27!GO:0005743;mitochondrial inner membrane;2.51101849745231e-26!GO:0051301;cell division;4.14326405489735e-26!GO:0044445;cytosolic part;1.93810208890038e-25!GO:0016887;ATPase activity;2.14070835503746e-25!GO:0006886;intracellular protein transport;7.6187870985563e-25!GO:0042623;ATPase activity, coupled;8.52823630257148e-25!GO:0006325;establishment and/or maintenance of chromatin architecture;1.31322337749691e-24!GO:0005524;ATP binding;2.65733577750129e-24!GO:0032559;adenyl ribonucleotide binding;7.98536190626338e-24!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;8.60754681168285e-24!GO:0006323;DNA packaging;8.94788406763369e-24!GO:0016462;pyrophosphatase activity;9.56514379305888e-24!GO:0016817;hydrolase activity, acting on acid anhydrides;1.14151970499301e-23!GO:0017111;nucleoside-triphosphatase activity;1.64332443370952e-23!GO:0030554;adenyl nucleotide binding;3.71740204226169e-23!GO:0005730;nucleolus;6.63193949510745e-23!GO:0006119;oxidative phosphorylation;1.70674773043787e-22!GO:0044455;mitochondrial membrane part;4.44419744605751e-22!GO:0032553;ribonucleotide binding;5.85486865629491e-22!GO:0032555;purine ribonucleotide binding;5.85486865629491e-22!GO:0015935;small ribosomal subunit;8.21777754053072e-22!GO:0006512;ubiquitin cycle;1.03384075841039e-21!GO:0017076;purine nucleotide binding;1.29822169334898e-21!GO:0031980;mitochondrial lumen;1.33012039146727e-21!GO:0005759;mitochondrial matrix;1.33012039146727e-21!GO:0016874;ligase activity;3.0422965603131e-21!GO:0044265;cellular macromolecule catabolic process;5.61488737902419e-21!GO:0015934;large ribosomal subunit;6.66840752982298e-21!GO:0022618;protein-RNA complex assembly;7.34197856518032e-21!GO:0051641;cellular localization;9.40463001792741e-20!GO:0051649;establishment of cellular localization;1.01220131345391e-19!GO:0000785;chromatin;8.66314982864376e-19!GO:0004386;helicase activity;2.20120098623303e-18!GO:0043285;biopolymer catabolic process;5.18233997032247e-18!GO:0006457;protein folding;6.04162219340516e-18!GO:0042254;ribosome biogenesis and assembly;1.08878033740261e-17!GO:0005746;mitochondrial respiratory chain;1.34146148849382e-17!GO:0006261;DNA-dependent DNA replication;1.75477109171879e-17!GO:0009057;macromolecule catabolic process;2.85476410354937e-17!GO:0008135;translation factor activity, nucleic acid binding;3.35211091811084e-17!GO:0000502;proteasome complex (sensu Eukaryota);3.61548271358835e-17!GO:0000398;nuclear mRNA splicing, via spliceosome;3.61548271358835e-17!GO:0000375;RNA splicing, via transesterification reactions;3.61548271358835e-17!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.61548271358835e-17!GO:0016568;chromatin modification;4.44829241353914e-17!GO:0019941;modification-dependent protein catabolic process;6.54511364386064e-17!GO:0043632;modification-dependent macromolecule catabolic process;6.54511364386064e-17!GO:0031965;nuclear membrane;7.85329726891204e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;8.12113539260771e-17!GO:0044453;nuclear membrane part;1.20265078069744e-16!GO:0006511;ubiquitin-dependent protein catabolic process;1.59427520157314e-16!GO:0051726;regulation of cell cycle;1.72207660371662e-16!GO:0044257;cellular protein catabolic process;2.12774472136195e-16!GO:0005761;mitochondrial ribosome;2.12774472136195e-16!GO:0000313;organellar ribosome;2.12774472136195e-16!GO:0000074;regulation of progression through cell cycle;4.00193203082835e-16!GO:0005635;nuclear envelope;6.73903238445037e-16!GO:0044248;cellular catabolic process;7.65286395769828e-16!GO:0050136;NADH dehydrogenase (quinone) activity;7.65286395769828e-16!GO:0003954;NADH dehydrogenase activity;7.65286395769828e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;7.65286395769828e-16!GO:0008026;ATP-dependent helicase activity;8.54240660773177e-16!GO:0043412;biopolymer modification;9.23476002784736e-16!GO:0006605;protein targeting;1.09692252203683e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.17299911290598e-15!GO:0006333;chromatin assembly or disassembly;1.26141736363081e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.66305326596785e-15!GO:0065004;protein-DNA complex assembly;4.55363258504317e-15!GO:0016604;nuclear body;4.61795832094887e-15!GO:0012505;endomembrane system;4.78875539970232e-15!GO:0005643;nuclear pore;1.03218617766154e-14!GO:0006399;tRNA metabolic process;1.28703123955451e-14!GO:0000775;chromosome, pericentric region;1.29108790628597e-14!GO:0006403;RNA localization;1.44256241474177e-14!GO:0050657;nucleic acid transport;2.67515136751406e-14!GO:0051236;establishment of RNA localization;2.67515136751406e-14!GO:0050658;RNA transport;2.67515136751406e-14!GO:0043566;structure-specific DNA binding;4.5222701333865e-14!GO:0042775;organelle ATP synthesis coupled electron transport;6.86088283516716e-14!GO:0042773;ATP synthesis coupled electron transport;6.86088283516716e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);8.20346985620487e-14!GO:0051186;cofactor metabolic process;9.65524333168245e-14!GO:0030964;NADH dehydrogenase complex (quinone);1.08317482222337e-13!GO:0045271;respiratory chain complex I;1.08317482222337e-13!GO:0005747;mitochondrial respiratory chain complex I;1.08317482222337e-13!GO:0008134;transcription factor binding;1.18723282291139e-13!GO:0051082;unfolded protein binding;1.38848699721073e-13!GO:0003697;single-stranded DNA binding;2.05748437892347e-13!GO:0003743;translation initiation factor activity;2.67892907118182e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.12642899886003e-13!GO:0006913;nucleocytoplasmic transport;4.43887386058281e-13!GO:0030163;protein catabolic process;6.3337088984628e-13!GO:0051169;nuclear transport;8.15178451723665e-13!GO:0046930;pore complex;1.13578258571204e-12!GO:0006464;protein modification process;1.15346242535709e-12!GO:0006413;translational initiation;1.43078446655572e-12!GO:0043687;post-translational protein modification;1.52908714138105e-12!GO:0006364;rRNA processing;1.77948167305984e-12!GO:0019222;regulation of metabolic process;2.08267885840477e-12!GO:0065002;intracellular protein transport across a membrane;3.16767503389895e-12!GO:0051028;mRNA transport;4.70833616022294e-12!GO:0016072;rRNA metabolic process;4.8791508021047e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;5.74498931533733e-12!GO:0009259;ribonucleotide metabolic process;5.87835367182218e-12!GO:0006310;DNA recombination;6.24926765104972e-12!GO:0016779;nucleotidyltransferase activity;7.65137866020524e-12!GO:0006732;coenzyme metabolic process;7.65137866020524e-12!GO:0016787;hydrolase activity;8.85621111616215e-12!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.3084906974036e-11!GO:0006446;regulation of translational initiation;1.56192565198898e-11!GO:0016607;nuclear speck;1.80520812254117e-11!GO:0006163;purine nucleotide metabolic process;3.26469569272448e-11!GO:0005819;spindle;3.83992130786766e-11!GO:0006164;purine nucleotide biosynthetic process;5.36026837072188e-11!GO:0015630;microtubule cytoskeleton;5.48500539524458e-11!GO:0009260;ribonucleotide biosynthetic process;5.68977551083443e-11!GO:0003677;DNA binding;6.27432802457032e-11!GO:0005813;centrosome;6.80576345680996e-11!GO:0031323;regulation of cellular metabolic process;7.79045481745543e-11!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;8.16856146526554e-11!GO:0008094;DNA-dependent ATPase activity;8.40609952580781e-11!GO:0005815;microtubule organizing center;1.37512578476036e-10!GO:0050794;regulation of cellular process;1.61857533412504e-10!GO:0000075;cell cycle checkpoint;1.97947216590242e-10!GO:0006302;double-strand break repair;2.57161301855108e-10!GO:0031497;chromatin assembly;3.50523199292337e-10!GO:0009150;purine ribonucleotide metabolic process;3.74559284294894e-10!GO:0005657;replication fork;4.07041535229113e-10!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;4.2987234867269e-10!GO:0004812;aminoacyl-tRNA ligase activity;4.2987234867269e-10!GO:0016875;ligase activity, forming carbon-oxygen bonds;4.2987234867269e-10!GO:0006350;transcription;4.64904745101546e-10!GO:0009152;purine ribonucleotide biosynthetic process;6.11152518263717e-10!GO:0008639;small protein conjugating enzyme activity;6.41683835307197e-10!GO:0006334;nucleosome assembly;6.97526111655623e-10!GO:0017038;protein import;8.92985271483397e-10!GO:0048770;pigment granule;9.40037494705231e-10!GO:0042470;melanosome;9.40037494705231e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.01922193754463e-09!GO:0005839;proteasome core complex (sensu Eukaryota);1.21540229218652e-09!GO:0004842;ubiquitin-protein ligase activity;1.2620228357326e-09!GO:0004298;threonine endopeptidase activity;1.35368301583602e-09!GO:0019829;cation-transporting ATPase activity;1.46478443252153e-09!GO:0030532;small nuclear ribonucleoprotein complex;1.77652116262606e-09!GO:0044432;endoplasmic reticulum part;1.77716620754888e-09!GO:0043038;amino acid activation;1.85304505063504e-09!GO:0006418;tRNA aminoacylation for protein translation;1.85304505063504e-09!GO:0043039;tRNA aminoacylation;1.85304505063504e-09!GO:0019787;small conjugating protein ligase activity;2.22658272903608e-09!GO:0009055;electron carrier activity;2.49094741701579e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.89275331808642e-09!GO:0051325;interphase;2.89275331808642e-09!GO:0051188;cofactor biosynthetic process;3.20068117795199e-09!GO:0051329;interphase of mitotic cell cycle;4.71892013744534e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;5.41980339923438e-09!GO:0003712;transcription cofactor activity;6.52177056555604e-09!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.31633738306744e-09!GO:0048193;Golgi vesicle transport;1.02958347044299e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.17755697073358e-08!GO:0009056;catabolic process;1.46063692854961e-08!GO:0003899;DNA-directed RNA polymerase activity;1.84414499681986e-08!GO:0004518;nuclease activity;1.87501859112513e-08!GO:0007051;spindle organization and biogenesis;2.10606713417252e-08!GO:0010468;regulation of gene expression;2.27265705574818e-08!GO:0016881;acid-amino acid ligase activity;2.72218723846912e-08!GO:0015078;hydrogen ion transmembrane transporter activity;2.76026275216552e-08!GO:0051052;regulation of DNA metabolic process;2.90871427796029e-08!GO:0003682;chromatin binding;3.88543305816258e-08!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.19124511105194e-08!GO:0016741;transferase activity, transferring one-carbon groups;4.59738834053254e-08!GO:0009060;aerobic respiration;4.74234727581207e-08!GO:0005667;transcription factor complex;5.09252196222923e-08!GO:0015986;ATP synthesis coupled proton transport;5.64780048146619e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.64780048146619e-08!GO:0008565;protein transporter activity;5.64780048146619e-08!GO:0008168;methyltransferase activity;5.90284324875209e-08!GO:0003690;double-stranded DNA binding;5.90284324875209e-08!GO:0000245;spliceosome assembly;6.07264729657145e-08!GO:0016740;transferase activity;7.41315222117259e-08!GO:0003684;damaged DNA binding;7.67743204792177e-08!GO:0032446;protein modification by small protein conjugation;7.81477028078456e-08!GO:0032774;RNA biosynthetic process;9.82263096531328e-08!GO:0005789;endoplasmic reticulum membrane;9.82263096531328e-08!GO:0007005;mitochondrion organization and biogenesis;1.14874050652166e-07!GO:0012501;programmed cell death;1.15885192355421e-07!GO:0005783;endoplasmic reticulum;1.19952344269707e-07!GO:0016363;nuclear matrix;1.22970533169749e-07!GO:0006366;transcription from RNA polymerase II promoter;1.34585886898646e-07!GO:0009117;nucleotide metabolic process;1.35725291566261e-07!GO:0009108;coenzyme biosynthetic process;1.49969710364887e-07!GO:0006915;apoptosis;1.50703329077916e-07!GO:0006351;transcription, DNA-dependent;1.53552544684255e-07!GO:0009141;nucleoside triphosphate metabolic process;1.61062596342905e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.78174028055816e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.78174028055816e-07!GO:0006752;group transfer coenzyme metabolic process;1.78174028055816e-07!GO:0009199;ribonucleoside triphosphate metabolic process;1.87571930953273e-07!GO:0016567;protein ubiquitination;2.20870943458175e-07!GO:0045333;cellular respiration;2.46981919119118e-07!GO:0006754;ATP biosynthetic process;2.65430959364746e-07!GO:0006753;nucleoside phosphate metabolic process;2.65430959364746e-07!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;3.7115112646989e-07!GO:0015399;primary active transmembrane transporter activity;3.7115112646989e-07!GO:0051168;nuclear export;4.15682107597547e-07!GO:0046034;ATP metabolic process;4.25109631974674e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.50335740842492e-07!GO:0009144;purine nucleoside triphosphate metabolic process;4.50335740842492e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;4.50335740842492e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;4.50335740842492e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;5.10411418972535e-07!GO:0045259;proton-transporting ATP synthase complex;5.16563124563293e-07!GO:0016469;proton-transporting two-sector ATPase complex;5.45881207763126e-07!GO:0019899;enzyme binding;5.61167136680388e-07!GO:0000151;ubiquitin ligase complex;6.30100756712025e-07!GO:0006793;phosphorus metabolic process;6.30100756712025e-07!GO:0006796;phosphate metabolic process;6.30100756712025e-07!GO:0006099;tricarboxylic acid cycle;7.28166891549283e-07!GO:0046356;acetyl-CoA catabolic process;7.28166891549283e-07!GO:0008219;cell death;7.3915376012325e-07!GO:0016265;death;7.3915376012325e-07!GO:0003724;RNA helicase activity;7.92059795931411e-07!GO:0006084;acetyl-CoA metabolic process;8.36240788123848e-07!GO:0004527;exonuclease activity;8.81236825465865e-07!GO:0003678;DNA helicase activity;1.01288844623931e-06!GO:0007088;regulation of mitosis;1.01293460356808e-06!GO:0050789;regulation of biological process;1.03272908598212e-06!GO:0006461;protein complex assembly;1.04255927173325e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;1.0634741787414e-06!GO:0007059;chromosome segregation;1.09439800551487e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.29994422170054e-06!GO:0045449;regulation of transcription;1.6534916254285e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.83586255681751e-06!GO:0008033;tRNA processing;2.08944570958936e-06!GO:0016310;phosphorylation;2.24304655684427e-06!GO:0005762;mitochondrial large ribosomal subunit;2.55289611331335e-06!GO:0000315;organellar large ribosomal subunit;2.55289611331335e-06!GO:0006401;RNA catabolic process;2.76238678148566e-06!GO:0003713;transcription coactivator activity;2.88256664995711e-06!GO:0000786;nucleosome;5.12883770248026e-06!GO:0009109;coenzyme catabolic process;5.38328737773317e-06!GO:0006352;transcription initiation;5.69710270443393e-06!GO:0043492;ATPase activity, coupled to movement of substances;5.91849608223028e-06!GO:0007093;mitotic cell cycle checkpoint;6.35845623360522e-06!GO:0000776;kinetochore;6.60372815390893e-06!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;6.82855301401864e-06!GO:0000228;nuclear chromosome;7.26053916694221e-06!GO:0006606;protein import into nucleus;8.14952412778153e-06!GO:0006402;mRNA catabolic process;8.21855402901301e-06!GO:0009165;nucleotide biosynthetic process;8.35738262541717e-06!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;9.57257331846728e-06!GO:0051170;nuclear import;9.90558429488983e-06!GO:0043623;cellular protein complex assembly;1.43730261383266e-05!GO:0003729;mRNA binding;1.67273842611795e-05!GO:0045786;negative regulation of progression through cell cycle;1.67754402076562e-05!GO:0016563;transcription activator activity;1.75365893397277e-05!GO:0051427;hormone receptor binding;1.82859545236615e-05!GO:0006270;DNA replication initiation;2.06405378500177e-05!GO:0016564;transcription repressor activity;2.15934711999194e-05!GO:0006355;regulation of transcription, DNA-dependent;2.36819544892115e-05!GO:0032508;DNA duplex unwinding;2.43534250546348e-05!GO:0032392;DNA geometric change;2.43534250546348e-05!GO:0000314;organellar small ribosomal subunit;2.58076271700522e-05!GO:0005763;mitochondrial small ribosomal subunit;2.58076271700522e-05!GO:0006284;base-excision repair;2.73027398209919e-05!GO:0006383;transcription from RNA polymerase III promoter;2.9317003609108e-05!GO:0008186;RNA-dependent ATPase activity;2.96929190519709e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;3.23390232645679e-05!GO:0006888;ER to Golgi vesicle-mediated transport;3.28020700375445e-05!GO:0006268;DNA unwinding during replication;3.82311224176571e-05!GO:0006613;cotranslational protein targeting to membrane;4.01717711588573e-05!GO:0035257;nuclear hormone receptor binding;4.14326247720531e-05!GO:0006275;regulation of DNA replication;4.37750351248969e-05!GO:0031324;negative regulation of cellular metabolic process;5.47771827295387e-05!GO:0051187;cofactor catabolic process;5.62835806230422e-05!GO:0005794;Golgi apparatus;6.06583091281891e-05!GO:0003887;DNA-directed DNA polymerase activity;6.17872508868697e-05!GO:0016192;vesicle-mediated transport;6.35070968335806e-05!GO:0006289;nucleotide-excision repair;6.98222166720507e-05!GO:0042981;regulation of apoptosis;7.32969273496989e-05!GO:0044452;nucleolar part;8.28877294625463e-05!GO:0006612;protein targeting to membrane;8.53171753708563e-05!GO:0043021;ribonucleoprotein binding;8.64316684633464e-05!GO:0043067;regulation of programmed cell death;9.05671247918336e-05!GO:0065009;regulation of a molecular function;9.24001865266141e-05!GO:0032259;methylation;9.33479853116459e-05!GO:0000819;sister chromatid segregation;9.60676959350746e-05!GO:0043681;protein import into mitochondrion;9.93102025771568e-05!GO:0004004;ATP-dependent RNA helicase activity;9.98685281661458e-05!GO:0000725;recombinational repair;0.00010648909684476!GO:0000724;double-strand break repair via homologous recombination;0.00010648909684476!GO:0000070;mitotic sister chromatid segregation;0.000109888644024365!GO:0051246;regulation of protein metabolic process;0.000110886006235593!GO:0030880;RNA polymerase complex;0.000111590316614759!GO:0031570;DNA integrity checkpoint;0.000111590316614759!GO:0005793;ER-Golgi intermediate compartment;0.000112266266744972!GO:0016853;isomerase activity;0.000112817748939175!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000113355720618574!GO:0006414;translational elongation;0.000137239118801096!GO:0032200;telomere organization and biogenesis;0.000140233095714559!GO:0000723;telomere maintenance;0.000140233095714559!GO:0007052;mitotic spindle organization and biogenesis;0.000153688928815391!GO:0044450;microtubule organizing center part;0.000153872273700396!GO:0043596;nuclear replication fork;0.000170241223869733!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000186371518527184!GO:0006338;chromatin remodeling;0.000189276282956236!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.000190389320281122!GO:0006405;RNA export from nucleus;0.000199820489395178!GO:0051053;negative regulation of DNA metabolic process;0.000202130926629204!GO:0006626;protein targeting to mitochondrion;0.000247126647302717!GO:0006818;hydrogen transport;0.000247126647302717!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000255870854428915!GO:0005684;U2-dependent spliceosome;0.000259520950773852!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.000259520950773852!GO:0042393;histone binding;0.000259520950773852!GO:0008408;3'-5' exonuclease activity;0.000262403670718865!GO:0043414;biopolymer methylation;0.000272681601845333!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.000280906800236387!GO:0000428;DNA-directed RNA polymerase complex;0.000280906800236387!GO:0051539;4 iron, 4 sulfur cluster binding;0.000283529359008743!GO:0045454;cell redox homeostasis;0.000292358021586297!GO:0000922;spindle pole;0.000303547168104326!GO:0008276;protein methyltransferase activity;0.000327674865178678!GO:0048523;negative regulation of cellular process;0.000331503482233105!GO:0006091;generation of precursor metabolites and energy;0.000336668645352657!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000338384873697491!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.000340268468584243!GO:0048475;coated membrane;0.000341932166424593!GO:0030117;membrane coat;0.000341932166424593!GO:0015992;proton transport;0.000342755838308999!GO:0016251;general RNA polymerase II transcription factor activity;0.000364072464432132!GO:0005876;spindle microtubule;0.000401299782081404!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000401299782081404!GO:0006839;mitochondrial transport;0.000415595828082614!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000500555961342626!GO:0009124;nucleoside monophosphate biosynthetic process;0.000506666000810889!GO:0009123;nucleoside monophosphate metabolic process;0.000506666000810889!GO:0031124;mRNA 3'-end processing;0.000512289882691337!GO:0015631;tubulin binding;0.00052079140942394!GO:0022890;inorganic cation transmembrane transporter activity;0.000556914425232001!GO:0009892;negative regulation of metabolic process;0.000600069114009976!GO:0000049;tRNA binding;0.000606441729266133!GO:0006611;protein export from nucleus;0.000610510772518651!GO:0006367;transcription initiation from RNA polymerase II promoter;0.000617026644732633!GO:0051540;metal cluster binding;0.000619787190875612!GO:0051536;iron-sulfur cluster binding;0.000619787190875612!GO:0030120;vesicle coat;0.000641996776828255!GO:0030662;coated vesicle membrane;0.000641996776828255!GO:0009112;nucleobase metabolic process;0.000650489292089014!GO:0007006;mitochondrial membrane organization and biogenesis;0.000668218486243947!GO:0000077;DNA damage checkpoint;0.000695353794686915!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.000717585853659622!GO:0046489;phosphoinositide biosynthetic process;0.000731567898145233!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000731567898145233!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000731567898145233!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000731567898145233!GO:0000059;protein import into nucleus, docking;0.000761819477973847!GO:0008270;zinc ion binding;0.000767058436225724!GO:0043601;nuclear replisome;0.000768423293631661!GO:0030894;replisome;0.000768423293631661!GO:0004532;exoribonuclease activity;0.000768423293631661!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.000768423293631661!GO:0008654;phospholipid biosynthetic process;0.000785540794010914!GO:0044454;nuclear chromosome part;0.000859604625519351!GO:0004003;ATP-dependent DNA helicase activity;0.000875840548927933!GO:0003711;transcription elongation regulator activity;0.000925895329803654!GO:0007017;microtubule-based process;0.000936855369217566!GO:0051320;S phase;0.000937279733166977!GO:0000118;histone deacetylase complex;0.000937629072886755!GO:0004674;protein serine/threonine kinase activity;0.000938910346030434!GO:0030521;androgen receptor signaling pathway;0.000964556962574094!GO:0051252;regulation of RNA metabolic process;0.000993812157028239!GO:0016859;cis-trans isomerase activity;0.0010028534547727!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00104734789109376!GO:0051920;peroxiredoxin activity;0.00106041692421498!GO:0016272;prefoldin complex;0.00108902720527227!GO:0019900;kinase binding;0.00111795683306313!GO:0031123;RNA 3'-end processing;0.00112152992300156!GO:0000178;exosome (RNase complex);0.00116240106417291!GO:0000726;non-recombinational repair;0.00118918822963219!GO:0046474;glycerophospholipid biosynthetic process;0.00121814913899356!GO:0019843;rRNA binding;0.00122808638437482!GO:0000792;heterochromatin;0.00123290089022176!GO:0000781;chromosome, telomeric region;0.00124523645700829!GO:0008156;negative regulation of DNA replication;0.00125566054771646!GO:0040029;regulation of gene expression, epigenetic;0.00131244378955685!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00136466877887071!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00136466877887071!GO:0005885;Arp2/3 protein complex;0.00143892282893567!GO:0009161;ribonucleoside monophosphate metabolic process;0.00145479281775619!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.00145479281775619!GO:0000287;magnesium ion binding;0.00158103103926996!GO:0005637;nuclear inner membrane;0.00159280670404144!GO:0030384;phosphoinositide metabolic process;0.00170669776182626!GO:0006650;glycerophospholipid metabolic process;0.00170688857247547!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00176796168528286!GO:0015002;heme-copper terminal oxidase activity;0.00176796168528286!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00176796168528286!GO:0004129;cytochrome-c oxidase activity;0.00176796168528286!GO:0007004;telomere maintenance via telomerase;0.00183929455132863!GO:0003725;double-stranded RNA binding;0.00213938459292083!GO:0003714;transcription corepressor activity;0.00216361752392534!GO:0048519;negative regulation of biological process;0.00222566908815772!GO:0008632;apoptotic program;0.00233616900681152!GO:0000910;cytokinesis;0.00255709392379099!GO:0065007;biological regulation;0.00260502174107368!GO:0007346;regulation of progression through mitotic cell cycle;0.00263599807497844!GO:0008139;nuclear localization sequence binding;0.00265687102997707!GO:0051087;chaperone binding;0.00268291633361437!GO:0019901;protein kinase binding;0.00276193758024577!GO:0008022;protein C-terminus binding;0.00277157999775306!GO:0005048;signal sequence binding;0.00282941862897411!GO:0005669;transcription factor TFIID complex;0.00296635124235427!GO:0006950;response to stress;0.00307978265566768!GO:0006144;purine base metabolic process;0.00309512023652426!GO:0009451;RNA modification;0.00312809176649703!GO:0000082;G1/S transition of mitotic cell cycle;0.00325834651783886!GO:0006595;polyamine metabolic process;0.00331998275414977!GO:0005768;endosome;0.00342287187719526!GO:0005874;microtubule;0.00345468611907486!GO:0016481;negative regulation of transcription;0.00361630216280291!GO:0050790;regulation of catalytic activity;0.00381676091349417!GO:0005663;DNA replication factor C complex;0.00389491222931882!GO:0042802;identical protein binding;0.00397136023178437!GO:0030518;steroid hormone receptor signaling pathway;0.00399665497700314!GO:0006916;anti-apoptosis;0.00403651814847198!GO:0043069;negative regulation of programmed cell death;0.00407627466163955!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00425051469839096!GO:0006730;one-carbon compound metabolic process;0.00427076564587218!GO:0035258;steroid hormone receptor binding;0.00433343388773327!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00443217882463492!GO:0019867;outer membrane;0.00451835691949808!GO:0046914;transition metal ion binding;0.00454048717340259!GO:0006378;mRNA polyadenylation;0.00464893887548206!GO:0006891;intra-Golgi vesicle-mediated transport;0.00470539572497638!GO:0004536;deoxyribonuclease activity;0.00472970008040109!GO:0016569;covalent chromatin modification;0.00485386684330328!GO:0046483;heterocycle metabolic process;0.00485479964132941!GO:0008017;microtubule binding;0.00499847801526431!GO:0043066;negative regulation of apoptosis;0.00508192427294111!GO:0042770;DNA damage response, signal transduction;0.00512624585828452!GO:0008312;7S RNA binding;0.00515664153734308!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00519653572652125!GO:0043488;regulation of mRNA stability;0.00519706769408312!GO:0043487;regulation of RNA stability;0.00519706769408312!GO:0031072;heat shock protein binding;0.00520036580206277!GO:0031968;organelle outer membrane;0.00528580990878307!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.00534997208521606!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.00534997208521606!GO:0009126;purine nucleoside monophosphate metabolic process;0.00534997208521606!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.00534997208521606!GO:0051297;centrosome organization and biogenesis;0.00542416318683733!GO:0031023;microtubule organizing center organization and biogenesis;0.00542416318683733!GO:0016491;oxidoreductase activity;0.00568802138532302!GO:0031577;spindle checkpoint;0.00593835358185453!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.00597363982622018!GO:0006007;glucose catabolic process;0.00607254033217241!GO:0051789;response to protein stimulus;0.00610265748262339!GO:0006986;response to unfolded protein;0.00610265748262339!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0062930956559529!GO:0046966;thyroid hormone receptor binding;0.00655576968835789!GO:0000018;regulation of DNA recombination;0.00675947448438897!GO:0048500;signal recognition particle;0.00682424298293834!GO:0000175;3'-5'-exoribonuclease activity;0.00685844264449573!GO:0015980;energy derivation by oxidation of organic compounds;0.006918767101015!GO:0046112;nucleobase biosynthetic process;0.006918767101015!GO:0016584;nucleosome positioning;0.00692107202271097!GO:0004520;endodeoxyribonuclease activity;0.00696719927499958!GO:0000152;nuclear ubiquitin ligase complex;0.00719301934188577!GO:0006505;GPI anchor metabolic process;0.00747252212449171!GO:0043022;ribosome binding;0.00767231689205562!GO:0000930;gamma-tubulin complex;0.00812322909264753!GO:0005798;Golgi-associated vesicle;0.00825878149383784!GO:0005658;alpha DNA polymerase:primase complex;0.00829033885042167!GO:0006506;GPI anchor biosynthetic process;0.00861965509602182!GO:0042054;histone methyltransferase activity;0.00866538991229631!GO:0016197;endosome transport;0.00886332715432814!GO:0000793;condensed chromosome;0.00897123729453635!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.00922577078927439!GO:0016788;hydrolase activity, acting on ester bonds;0.00931367747131502!GO:0043284;biopolymer biosynthetic process;0.00931628480654011!GO:0004540;ribonuclease activity;0.00933285847193949!GO:0030522;intracellular receptor-mediated signaling pathway;0.00945375216064333!GO:0032404;mismatch repair complex binding;0.00956141713295287!GO:0006497;protein amino acid lipidation;0.00978750519304439!GO:0006303;double-strand break repair via nonhomologous end joining;0.0101147748322567!GO:0046982;protein heterodimerization activity;0.0101455652882764!GO:0033261;regulation of progression through S phase;0.0102443823602315!GO:0000084;S phase of mitotic cell cycle;0.0108009482811833!GO:0004519;endonuclease activity;0.010813203939792!GO:0006417;regulation of translation;0.0109652925582822!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0109796176035137!GO:0045047;protein targeting to ER;0.0109796176035137!GO:0051318;G1 phase;0.0110715122822761!GO:0005741;mitochondrial outer membrane;0.0111219253733789!GO:0031647;regulation of protein stability;0.0113880939352695!GO:0006304;DNA modification;0.0121007422775252!GO:0005788;endoplasmic reticulum lumen;0.0123644224831464!GO:0048471;perinuclear region of cytoplasm;0.012397693276714!GO:0005832;chaperonin-containing T-complex;0.0125290753716273!GO:0004523;ribonuclease H activity;0.0126968759531057!GO:0000731;DNA synthesis during DNA repair;0.0127127840364932!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0129111548214102!GO:0006695;cholesterol biosynthetic process;0.0129411217852399!GO:0006278;RNA-dependent DNA replication;0.0129783985906322!GO:0047485;protein N-terminus binding;0.0130109580080564!GO:0006376;mRNA splice site selection;0.013088130514729!GO:0000389;nuclear mRNA 3'-splice site recognition;0.013088130514729!GO:0016279;protein-lysine N-methyltransferase activity;0.0130987427239641!GO:0018024;histone-lysine N-methyltransferase activity;0.0130987427239641!GO:0016278;lysine N-methyltransferase activity;0.0130987427239641!GO:0005652;nuclear lamina;0.0136764772890528!GO:0032039;integrator complex;0.0139276538265331!GO:0001824;blastocyst development;0.0139650154206112!GO:0000123;histone acetyltransferase complex;0.0139796105422424!GO:0004576;oligosaccharyl transferase activity;0.0140640058393023!GO:0006406;mRNA export from nucleus;0.014403103484186!GO:0006266;DNA ligation;0.0144129772392826!GO:0000209;protein polyubiquitination;0.0146580826071778!GO:0003746;translation elongation factor activity;0.0148732662358605!GO:0033170;DNA-protein loading ATPase activity;0.0150388060358598!GO:0003689;DNA clamp loader activity;0.0150388060358598!GO:0000790;nuclear chromatin;0.0156543100581017!GO:0043189;H4/H2A histone acetyltransferase complex;0.0156543100581017!GO:0006301;postreplication repair;0.0157502571859936!GO:0007098;centrosome cycle;0.0157739288661171!GO:0008213;protein amino acid alkylation;0.0157739288661171!GO:0006479;protein amino acid methylation;0.0157739288661171!GO:0031970;organelle envelope lumen;0.0157814511300422!GO:0016407;acetyltransferase activity;0.0158209576557947!GO:0001832;blastocyst growth;0.0159651481012641!GO:0005869;dynactin complex;0.0160031463693353!GO:0008536;Ran GTPase binding;0.0162318458225513!GO:0031326;regulation of cellular biosynthetic process;0.0162548932798085!GO:0050662;coenzyme binding;0.0162548932798085!GO:0016126;sterol biosynthetic process;0.0165153892286217!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0165901402809786!GO:0000080;G1 phase of mitotic cell cycle;0.0167308791530657!GO:0042809;vitamin D receptor binding;0.0170741692694783!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0172031652994698!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0172685835092731!GO:0033558;protein deacetylase activity;0.0174305100124731!GO:0005769;early endosome;0.0180403355071412!GO:0007021;tubulin folding;0.0181709171808116!GO:0043631;RNA polyadenylation;0.0182089607855396!GO:0007094;mitotic cell cycle spindle assembly checkpoint;0.0185374311829232!GO:0033673;negative regulation of kinase activity;0.0185602772000652!GO:0006469;negative regulation of protein kinase activity;0.0185602772000652!GO:0016570;histone modification;0.018714321675529!GO:0000096;sulfur amino acid metabolic process;0.018714321675529!GO:0006096;glycolysis;0.0187390680515753!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0188633830061513!GO:0010257;NADH dehydrogenase complex assembly;0.0188633830061513!GO:0033108;mitochondrial respiratory chain complex assembly;0.0188633830061513!GO:0000339;RNA cap binding;0.0191275245002553!GO:0009116;nucleoside metabolic process;0.0192605636769915!GO:0030663;COPI coated vesicle membrane;0.0193410832502678!GO:0030126;COPI vesicle coat;0.0193410832502678!GO:0046365;monosaccharide catabolic process;0.0196753313333662!GO:0006520;amino acid metabolic process;0.0196970837526857!GO:0005758;mitochondrial intermembrane space;0.0197568770981939!GO:0051348;negative regulation of transferase activity;0.0202284352035142!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.020427531406832!GO:0019104;DNA N-glycosylase activity;0.0207167784755579!GO:0019213;deacetylase activity;0.02174271308868!GO:0044431;Golgi apparatus part;0.0217615533197575!GO:0030176;integral to endoplasmic reticulum membrane;0.0219026345917594!GO:0004407;histone deacetylase activity;0.0219251383538818!GO:0005770;late endosome;0.0220387725770693!GO:0048487;beta-tubulin binding;0.0223317471010532!GO:0008143;poly(A) binding;0.0229527452961519!GO:0042158;lipoprotein biosynthetic process;0.0235899776205986!GO:0044262;cellular carbohydrate metabolic process;0.0242801505823394!GO:0005680;anaphase-promoting complex;0.0243386024679609!GO:0046426;negative regulation of JAK-STAT cascade;0.024740617361109!GO:0007050;cell cycle arrest;0.0248016965686783!GO:0045815;positive regulation of gene expression, epigenetic;0.0252350935650538!GO:0006400;tRNA modification;0.0252666603611149!GO:0050852;T cell receptor signaling pathway;0.0253723287053499!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0253842117199231!GO:0006607;NLS-bearing substrate import into nucleus;0.0262764207853225!GO:0042769;DNA damage response, detection of DNA damage;0.0263942815226429!GO:0008637;apoptotic mitochondrial changes;0.0267087320167787!GO:0022411;cellular component disassembly;0.0268081130566211!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0269780924314193!GO:0035267;NuA4 histone acetyltransferase complex;0.0272971650598028!GO:0008538;proteasome activator activity;0.0273823565604242!GO:0005487;nucleocytoplasmic transporter activity;0.0274507732034952!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0277633651586691!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0284509434088287!GO:0045039;protein import into mitochondrial inner membrane;0.0284509434088287!GO:0045947;negative regulation of translational initiation;0.0287949822953068!GO:0046983;protein dimerization activity;0.0291534144065977!GO:0022415;viral reproductive process;0.0291534144065977!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0295397483322155!GO:0050681;androgen receptor binding;0.0295397483322155!GO:0008250;oligosaccharyl transferase complex;0.0304050255471196!GO:0046164;alcohol catabolic process;0.0304642788564335!GO:0008299;isoprenoid biosynthetic process;0.0306341869082779!GO:0016790;thiolester hydrolase activity;0.0310911809477902!GO:0019752;carboxylic acid metabolic process;0.0316531861737178!GO:0006220;pyrimidine nucleotide metabolic process;0.0316845887259198!GO:0043624;cellular protein complex disassembly;0.0317491114042094!GO:0042608;T cell receptor binding;0.0322327500157634!GO:0019320;hexose catabolic process;0.0323184095340175!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0325107638905445!GO:0043626;PCNA complex;0.0325107638905445!GO:0030337;DNA polymerase processivity factor activity;0.0325107638905445!GO:0016585;chromatin remodeling complex;0.03266440475135!GO:0019783;small conjugating protein-specific protease activity;0.0327886304872902!GO:0006740;NADPH regeneration;0.0332072002134152!GO:0006098;pentose-phosphate shunt;0.0332072002134152!GO:0005521;lamin binding;0.033410403242558!GO:0008170;N-methyltransferase activity;0.0335233178341206!GO:0032405;MutLalpha complex binding;0.0335233178341206!GO:0007040;lysosome organization and biogenesis;0.0338108196535495!GO:0009396;folic acid and derivative biosynthetic process;0.0340608950390563!GO:0008180;signalosome;0.0344617557865193!GO:0007034;vacuolar transport;0.0353041916932731!GO:0042532;negative regulation of tyrosine phosphorylation of STAT protein;0.0353041916932731!GO:0042518;negative regulation of tyrosine phosphorylation of Stat3 protein;0.0353041916932731!GO:0050732;negative regulation of peptidyl-tyrosine phosphorylation;0.0353041916932731!GO:0009889;regulation of biosynthetic process;0.0353554035277912!GO:0004843;ubiquitin-specific protease activity;0.03571580865379!GO:0051338;regulation of transferase activity;0.0357862313072017!GO:0009303;rRNA transcription;0.0359097282023523!GO:0033116;ER-Golgi intermediate compartment membrane;0.0359473590379883!GO:0051235;maintenance of localization;0.0372022778779433!GO:0006415;translational termination;0.0372144412134844!GO:0016180;snRNA processing;0.0372677680272602!GO:0016073;snRNA metabolic process;0.0372677680272602!GO:0003727;single-stranded RNA binding;0.0372841530832593!GO:0030137;COPI-coated vesicle;0.0373854253104497!GO:0000097;sulfur amino acid biosynthetic process;0.0378012905564625!GO:0006779;porphyrin biosynthetic process;0.0387401291403127!GO:0033014;tetrapyrrole biosynthetic process;0.0387401291403127!GO:0005689;U12-dependent spliceosome;0.0391040166131116!GO:0008234;cysteine-type peptidase activity;0.0393982565072969!GO:0030174;regulation of DNA replication initiation;0.0404900203398051!GO:0032984;macromolecular complex disassembly;0.0412300177123294!GO:0008409;5'-3' exonuclease activity;0.0413977335756605!GO:0043549;regulation of kinase activity;0.041442030024013!GO:0044438;microbody part;0.0414640935971312!GO:0044439;peroxisomal part;0.0414640935971312!GO:0005092;GDP-dissociation inhibitor activity;0.0416109905904586!GO:0050178;phenylpyruvate tautomerase activity;0.0418144184368576!GO:0006596;polyamine biosynthetic process;0.0418144184368576!GO:0051287;NAD binding;0.0427154716518132!GO:0005784;translocon complex;0.0434066059044324!GO:0019079;viral genome replication;0.0437109915838556!GO:0051881;regulation of mitochondrial membrane potential;0.0438511047944496!GO:0001833;inner cell mass cell proliferation;0.0444205489724018!GO:0005666;DNA-directed RNA polymerase III complex;0.0444625963535464!GO:0000119;mediator complex;0.0445232013925261!GO:0030503;regulation of cell redox homeostasis;0.0447545944709242!GO:0005996;monosaccharide metabolic process;0.044914546230304!GO:0006298;mismatch repair;0.044914546230304!GO:0045005;maintenance of fidelity during DNA-dependent DNA replication;0.044914546230304!GO:0019238;cyclohydrolase activity;0.0450339437880798!GO:0005732;small nucleolar ribonucleoprotein complex;0.0456510531306509!GO:0000303;response to superoxide;0.0458027490870711!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0458027490870711!GO:0042101;T cell receptor complex;0.0466392477177106!GO:0030867;rough endoplasmic reticulum membrane;0.0472486138527805!GO:0005686;snRNP U2;0.0472486138527805!GO:0031628;opioid receptor binding;0.0472980004317253!GO:0031852;mu-type opioid receptor binding;0.0472980004317253!GO:0004448;isocitrate dehydrogenase activity;0.047495236427203!GO:0030508;thiol-disulfide exchange intermediate activity;0.0476625621215226!GO:0016799;hydrolase activity, hydrolyzing N-glycosyl compounds;0.0476829777308869!GO:0008320;protein transmembrane transporter activity;0.0478163122219282!GO:0031901;early endosome membrane;0.0481878573949722!GO:0044440;endosomal part;0.0483830572054458!GO:0010008;endosome membrane;0.0483830572054458!GO:0007020;microtubule nucleation;0.0486808458827618!GO:0006082;organic acid metabolic process;0.0487756184879447!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0487756184879447!GO:0030261;chromosome condensation;0.0487756184879447!GO:0015036;disulfide oxidoreductase activity;0.048936311576425!GO:0019318;hexose metabolic process;0.0495791705247338
|sample_id=10435
|sample_id=10435
|sample_note=
|sample_note=
Line 76: Line 99:
|sample_tissue=blood
|sample_tissue=blood
|top_motifs=RBPJ:2.8502295077;E2F1..5:2.71232046641;MYB:2.64596343923;NFY{A,B,C}:2.55580174231;ELK1,4_GABP{A,B1}:2.31944333379;ZNF143:2.06402128007;PAX3,7:2.03665921432;RORA:2.00777251077;PBX1:1.99349361357;IKZF2:1.85102047623;YY1:1.75190337181;NKX6-1,2:1.63871233048;ELF1,2,4:1.60701580199;NRF1:1.59023001924;AIRE:1.58029745273;SOX{8,9,10}:1.56118896384;BREu{core}:1.5375637362;FOXP1:1.41657806333;PITX1..3:1.39368210208;RUNX1..3:1.36277946515;DMAP1_NCOR{1,2}_SMARC:1.26625245067;T:1.23037916249;POU2F1..3:1.19861711173;CDX1,2,4:1.16202633426;GFI1:1.09057414148;HOXA9_MEIS1:1.03578068317;TFDP1:1.02053836908;ZBTB16:0.953301181621;FOXD3:0.93510878339;PAX8:0.924780728114;POU3F1..4:0.908252846826;NR5A1,2:0.880762308116;TOPORS:0.872835794222;CREB1:0.850954325872;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.840730962969;ATF5_CREB3:0.786725073697;POU6F1:0.775200038678;HES1:0.742480451165;PAX6:0.713330296632;BPTF:0.700758711988;GATA6:0.661141420492;LMO2:0.649224622163;EN1,2:0.6457169787;SPZ1:0.619808456565;FOXA2:0.614338293138;TLX2:0.609518565047;NKX2-2,8:0.601274600913;NKX2-1,4:0.555906058684;STAT1,3:0.535440794679;ZNF384:0.518538708471;FOX{F1,F2,J1}:0.501073766349;NANOG:0.487191948263;SPI1:0.478838310063;VSX1,2:0.471096998453;CUX2:0.443783821837;SPIB:0.44198459486;ARID5B:0.431679750884;TGIF1:0.406323019122;ETS1,2:0.385424192534;HOX{A6,A7,B6,B7}:0.381321935622;ALX1:0.375458282952;LEF1_TCF7_TCF7L1,2:0.336407519385;FOX{I1,J2}:0.326076007889;CRX:0.258621904743;ATF4:0.23442452449;SOX2:0.228377576504;FOXO1,3,4:0.179591588966;HOX{A4,D4}:0.149349840047;EVI1:0.129076202409;SNAI1..3:0.127518314442;FOXN1:0.0854763608885;SOX17:0.0663298289384;NANOG{mouse}:0.00426581581702;PAX4:-0.0149979466514;TEF:-0.0365804229197;POU1F1:-0.0410254419185;HBP1_HMGB_SSRP1_UBTF:-0.0485866971804;AR:-0.0493736817005;HAND1,2:-0.0636119504506;PAX2:-0.0636784327236;FOXP3:-0.0774580196419;bHLH_family:-0.0985909749363;PDX1:-0.0997742305186;ZEB1:-0.114307291233;RFX2..5_RFXANK_RFXAP:-0.127509554155;RFX1:-0.141424550822;IRF1,2:-0.167878751993;FOXM1:-0.169135184478;AHR_ARNT_ARNT2:-0.171357870581;FOXQ1:-0.179832882188;OCT4_SOX2{dimer}:-0.182209234927;HNF1A:-0.184208610099;NFE2L1:-0.197233467866;NFKB1_REL_RELA:-0.211964390707;PRRX1,2:-0.219223944928;MYOD1:-0.226151359738;LHX3,4:-0.243813184806;ONECUT1,2:-0.25418502432;MYBL2:-0.271789378504;HOX{A5,B5}:-0.276623481914;NKX3-1:-0.283861922887;STAT5{A,B}:-0.301033341527;HNF4A_NR2F1,2:-0.305008540471;SOX5:-0.313243551266;DBP:-0.377409694816;UFEwm:-0.409588659574;ZFP161:-0.421858417453;NFIL3:-0.495405065505;FOX{D1,D2}:-0.495512631827;ADNP_IRX_SIX_ZHX:-0.501425371471;PAX1,9:-0.511142304042;MYFfamily:-0.523068076141;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.531884368867;NR6A1:-0.539020087781;MEF2{A,B,C,D}:-0.546426273635;SREBF1,2:-0.550550901398;RXR{A,B,G}:-0.576129092459;EP300:-0.606661861526;HMGA1,2:-0.638388753381;MED-1{core}:-0.646255553091;NKX2-3_NKX2-5:-0.660705327659;GATA4:-0.661943487969;SMAD1..7,9:-0.670722684684;NFE2:-0.693036389901;POU5F1:-0.719164267061;IRF7:-0.722590081269;FOSL2:-0.732863379921;ESRRA:-0.734552655233;HLF:-0.744115453719;EGR1..3:-0.788093117908;REST:-0.794102375121;NR1H4:-0.79495706195;NR3C1:-0.802459376582;NFIX:-0.846684233331;HSF1,2:-0.860935588826;KLF4:-0.864479979384;ZIC1..3:-0.871448817212;MZF1:-0.873344802345;FOS_FOS{B,L1}_JUN{B,D}:-0.876491604219;JUN:-0.879618519313;ATF6:-0.887372617057;BACH2:-0.924330051572;CEBPA,B_DDIT3:-0.935890489876;PAX5:-0.938085142882;TAL1_TCF{3,4,12}:-0.93868801851;ZNF238:-0.949344854555;SRF:-0.951733500152;GZF1:-0.972176948473;ZNF148:-0.976997101206;ZNF423:-0.977194367573;GTF2A1,2:-0.98317730598;CDC5L:-1.01864391125;ESR1:-1.02341866409;NKX3-2:-1.04238429261;IKZF1:-1.05263516397;TFAP4:-1.05482209765;GCM1,2:-1.07259504298;RXRA_VDR{dimer}:-1.10993309761;NHLH1,2:-1.11080299096;TBP:-1.11360269372;NFATC1..3:-1.12869599354;FOXL1:-1.19458835092;ATF2:-1.20445173452;MTE{core}:-1.22880943443;RREB1:-1.25222780379;GTF2I:-1.26305419332;PPARG:-1.27029437549;ZBTB6:-1.272548142;ALX4:-1.29193360661;XBP1:-1.2963847739;TEAD1:-1.30593477435;STAT2,4,6:-1.35423038421;HIC1:-1.36842067775;HIF1A:-1.39062917823;TP53:-1.41763635239;PATZ1:-1.42065618006;GFI1B:-1.43954596434;HMX1:-1.4424231242;EBF1:-1.45909584047;MAZ:-1.53683546051;NFE2L2:-1.59501470745;XCPE1{core}:-1.6881050482;PRDM1:-1.7290627492;MTF1:-1.81494597966;MAFB:-1.83379301672;TFAP2B:-1.8518417577;TLX1..3_NFIC{dimer}:-1.92564422515;SP1:-2.16722162555;GLI1..3:-2.2580396237;TBX4,5:-2.6523108349;TFAP2{A,C}:-2.67877605442;TFCP2:-2.80608577912
|top_motifs=RBPJ:2.8502295077;E2F1..5:2.71232046641;MYB:2.64596343923;NFY{A,B,C}:2.55580174231;ELK1,4_GABP{A,B1}:2.31944333379;ZNF143:2.06402128007;PAX3,7:2.03665921432;RORA:2.00777251077;PBX1:1.99349361357;IKZF2:1.85102047623;YY1:1.75190337181;NKX6-1,2:1.63871233048;ELF1,2,4:1.60701580199;NRF1:1.59023001924;AIRE:1.58029745273;SOX{8,9,10}:1.56118896384;BREu{core}:1.5375637362;FOXP1:1.41657806333;PITX1..3:1.39368210208;RUNX1..3:1.36277946515;DMAP1_NCOR{1,2}_SMARC:1.26625245067;T:1.23037916249;POU2F1..3:1.19861711173;CDX1,2,4:1.16202633426;GFI1:1.09057414148;HOXA9_MEIS1:1.03578068317;TFDP1:1.02053836908;ZBTB16:0.953301181621;FOXD3:0.93510878339;PAX8:0.924780728114;POU3F1..4:0.908252846826;NR5A1,2:0.880762308116;TOPORS:0.872835794222;CREB1:0.850954325872;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.840730962969;ATF5_CREB3:0.786725073697;POU6F1:0.775200038678;HES1:0.742480451165;PAX6:0.713330296632;BPTF:0.700758711988;GATA6:0.661141420492;LMO2:0.649224622163;EN1,2:0.6457169787;SPZ1:0.619808456565;FOXA2:0.614338293138;TLX2:0.609518565047;NKX2-2,8:0.601274600913;NKX2-1,4:0.555906058684;STAT1,3:0.535440794679;ZNF384:0.518538708471;FOX{F1,F2,J1}:0.501073766349;NANOG:0.487191948263;SPI1:0.478838310063;VSX1,2:0.471096998453;CUX2:0.443783821837;SPIB:0.44198459486;ARID5B:0.431679750884;TGIF1:0.406323019122;ETS1,2:0.385424192534;HOX{A6,A7,B6,B7}:0.381321935622;ALX1:0.375458282952;LEF1_TCF7_TCF7L1,2:0.336407519385;FOX{I1,J2}:0.326076007889;CRX:0.258621904743;ATF4:0.23442452449;SOX2:0.228377576504;FOXO1,3,4:0.179591588966;HOX{A4,D4}:0.149349840047;EVI1:0.129076202409;SNAI1..3:0.127518314442;FOXN1:0.0854763608885;SOX17:0.0663298289384;NANOG{mouse}:0.00426581581702;PAX4:-0.0149979466514;TEF:-0.0365804229197;POU1F1:-0.0410254419185;HBP1_HMGB_SSRP1_UBTF:-0.0485866971804;AR:-0.0493736817005;HAND1,2:-0.0636119504506;PAX2:-0.0636784327236;FOXP3:-0.0774580196419;bHLH_family:-0.0985909749363;PDX1:-0.0997742305186;ZEB1:-0.114307291233;RFX2..5_RFXANK_RFXAP:-0.127509554155;RFX1:-0.141424550822;IRF1,2:-0.167878751993;FOXM1:-0.169135184478;AHR_ARNT_ARNT2:-0.171357870581;FOXQ1:-0.179832882188;OCT4_SOX2{dimer}:-0.182209234927;HNF1A:-0.184208610099;NFE2L1:-0.197233467866;NFKB1_REL_RELA:-0.211964390707;PRRX1,2:-0.219223944928;MYOD1:-0.226151359738;LHX3,4:-0.243813184806;ONECUT1,2:-0.25418502432;MYBL2:-0.271789378504;HOX{A5,B5}:-0.276623481914;NKX3-1:-0.283861922887;STAT5{A,B}:-0.301033341527;HNF4A_NR2F1,2:-0.305008540471;SOX5:-0.313243551266;DBP:-0.377409694816;UFEwm:-0.409588659574;ZFP161:-0.421858417453;NFIL3:-0.495405065505;FOX{D1,D2}:-0.495512631827;ADNP_IRX_SIX_ZHX:-0.501425371471;PAX1,9:-0.511142304042;MYFfamily:-0.523068076141;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.531884368867;NR6A1:-0.539020087781;MEF2{A,B,C,D}:-0.546426273635;SREBF1,2:-0.550550901398;RXR{A,B,G}:-0.576129092459;EP300:-0.606661861526;HMGA1,2:-0.638388753381;MED-1{core}:-0.646255553091;NKX2-3_NKX2-5:-0.660705327659;GATA4:-0.661943487969;SMAD1..7,9:-0.670722684684;NFE2:-0.693036389901;POU5F1:-0.719164267061;IRF7:-0.722590081269;FOSL2:-0.732863379921;ESRRA:-0.734552655233;HLF:-0.744115453719;EGR1..3:-0.788093117908;REST:-0.794102375121;NR1H4:-0.79495706195;NR3C1:-0.802459376582;NFIX:-0.846684233331;HSF1,2:-0.860935588826;KLF4:-0.864479979384;ZIC1..3:-0.871448817212;MZF1:-0.873344802345;FOS_FOS{B,L1}_JUN{B,D}:-0.876491604219;JUN:-0.879618519313;ATF6:-0.887372617057;BACH2:-0.924330051572;CEBPA,B_DDIT3:-0.935890489876;PAX5:-0.938085142882;TAL1_TCF{3,4,12}:-0.93868801851;ZNF238:-0.949344854555;SRF:-0.951733500152;GZF1:-0.972176948473;ZNF148:-0.976997101206;ZNF423:-0.977194367573;GTF2A1,2:-0.98317730598;CDC5L:-1.01864391125;ESR1:-1.02341866409;NKX3-2:-1.04238429261;IKZF1:-1.05263516397;TFAP4:-1.05482209765;GCM1,2:-1.07259504298;RXRA_VDR{dimer}:-1.10993309761;NHLH1,2:-1.11080299096;TBP:-1.11360269372;NFATC1..3:-1.12869599354;FOXL1:-1.19458835092;ATF2:-1.20445173452;MTE{core}:-1.22880943443;RREB1:-1.25222780379;GTF2I:-1.26305419332;PPARG:-1.27029437549;ZBTB6:-1.272548142;ALX4:-1.29193360661;XBP1:-1.2963847739;TEAD1:-1.30593477435;STAT2,4,6:-1.35423038421;HIC1:-1.36842067775;HIF1A:-1.39062917823;TP53:-1.41763635239;PATZ1:-1.42065618006;GFI1B:-1.43954596434;HMX1:-1.4424231242;EBF1:-1.45909584047;MAZ:-1.53683546051;NFE2L2:-1.59501470745;XCPE1{core}:-1.6881050482;PRDM1:-1.7290627492;MTF1:-1.81494597966;MAFB:-1.83379301672;TFAP2B:-1.8518417577;TLX1..3_NFIC{dimer}:-1.92564422515;SP1:-2.16722162555;GLI1..3:-2.2580396237;TBX4,5:-2.6523108349;TFAP2{A,C}:-2.67877605442;TFCP2:-2.80608577912
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10435-106E3;search_select_hide=table117:FF:10435-106E3
}}
}}

Latest revision as of 14:01, 3 June 2020

Name:Hodgkin's lymphoma cell line:HD-Mar2
Species:Human (Homo sapiens)
Library ID:CNhs11715
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexunknown
ageNA
cell typelymphocyte
cell lineHD-Mar2
companyRIKEN Bioresource centre
collaborationYukio Nakamura (RIKEN BRC)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004765
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11715 CAGE DRX007791 DRR008663
Accession ID Hg19

Library idBAMCTSS
CNhs11715 DRZ000088 DRZ001473
Accession ID Hg38

Library idBAMCTSS
CNhs11715 DRZ011438 DRZ012823
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.0581
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.795
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.127
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B1.03
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.123
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.107
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.126
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.119
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.00893
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus1.286
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.101
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.159
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.848
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.0657
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.0351
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.485
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11715

Jaspar motifP-value
MA0002.20.0626
MA0003.10.502
MA0004.10.474
MA0006.10.164
MA0007.10.635
MA0009.10.847
MA0014.10.612
MA0017.10.592
MA0018.20.147
MA0019.10.235
MA0024.12.94306e-11
MA0025.10.488
MA0027.10.775
MA0028.18.5861e-8
MA0029.11
MA0030.10.22
MA0031.10.831
MA0035.20.109
MA0038.10.129
MA0039.20.236
MA0040.10.261
MA0041.10.318
MA0042.10.501
MA0043.10.94
MA0046.10.147
MA0047.20.761
MA0048.10.308
MA0050.10.269
MA0051.10.173
MA0052.10.0655
MA0055.10.169
MA0057.10.542
MA0058.10.324
MA0059.10.115
MA0060.11.49736e-16
MA0061.10.521
MA0062.22.58469e-14
MA0065.20.8
MA0066.10.805
MA0067.10.834
MA0068.10.447
MA0069.10.628
MA0070.10.228
MA0071.10.43
MA0072.10.134
MA0073.10.944
MA0074.10.562
MA0076.13.32962e-13
MA0077.10.897
MA0078.10.465
MA0079.20.19
MA0080.20.0561
MA0081.10.102
MA0083.10.00251
MA0084.10.304
MA0087.10.348
MA0088.16.01992e-4
MA0090.14.49821e-4
MA0091.10.526
MA0092.10.531
MA0093.10.432
MA0099.21.02234e-15
MA0100.10.00251
MA0101.10.209
MA0102.20.00232
MA0103.10.42
MA0104.20.00567
MA0105.10.306
MA0106.10.658
MA0107.10.0423
MA0108.28.62064e-7
MA0111.10.0988
MA0112.20.326
MA0113.10.246
MA0114.10.866
MA0115.10.213
MA0116.10.0602
MA0117.10.707
MA0119.10.741
MA0122.10.972
MA0124.10.815
MA0125.10.975
MA0131.10.0146
MA0135.10.0523
MA0136.13.79632e-7
MA0137.20.293
MA0138.20.475
MA0139.10.51
MA0140.10.135
MA0141.10.743
MA0142.10.656
MA0143.10.0512
MA0144.10.0213
MA0145.10.0345
MA0146.10.69
MA0147.10.00321
MA0148.10.405
MA0149.10.132
MA0150.10.00553
MA0152.10.13
MA0153.10.0926
MA0154.10.988
MA0155.10.465
MA0156.13.87494e-10
MA0157.10.779
MA0159.10.92
MA0160.10.607
MA0162.10.485
MA0163.10.00198
MA0164.10.607
MA0258.10.916
MA0259.10.0244



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11715

Novel motifP-value
10.214
100.0442
1000.289
1010.337
1020.526
1030.626
1040.673
1050.667
1060.0711
1070.029
1080.22
1090.545
110.431
1100.839
1110.33
1120.372
1130.54
1140.465
1150.881
1160.688
1170.0578
1180.91
1190.352
120.542
1200.841
1210.811
1220.848
1230.00206
1240.0558
1250.255
1260.855
1270.492
1280.037
1290.775
130.246
1300.159
1310.887
1320.51
1330.589
1340.369
1350.42
1360.587
1370.632
1380.854
1390.686
140.894
1400.719
1410.61
1420.863
1430.135
1440.907
1450.766
1460.628
1470.147
1480.827
1490.0579
150.516
1500.993
1510.399
1520.00738
1530.841
1541
1550.152
1560.695
1570.173
1580.821
1590.123
160.359
1600.848
1610.32
1620.644
1630.315
1640.682
1650.899
1660.439
1670.0508
1680.0922
1690.0949
170.243
180.44
190.0831
20.187
200.476
210.256
220.219
230.00843
240.954
250.205
260.242
270.894
280.558
290.0772
30.608
300.0825
310.378
320.0396
330.977
340.188
350.0942
360.0829
370.864
380.99
390.0723
40.122
400.895
410.555
420.193
430.741
440.547
450.173
460.442
470.071
480.509
490.468
50.837
500.502
510.599
520.0199
530.65
540.345
550.269
560.79
570.58
580.627
590.23
60.485
600.16
610.27
620.742
630.987
640.636
650.471
660.0218
670.619
680.209
690.747
70.35
700.655
710.173
720.826
730.057
740.32
750.135
760.634
770.0359
780.538
790.0324
80.854
800.515
810.704
820.711
830.77
840.711
850.026
860.621
870.397
880.786
890.0422
90.434
900.395
910.551
920.19
930.881
940.287
950.512
960.377
970.219
980.986
990.167



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11715


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000219 (motile cell)
0000738 (leukocyte)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
2531 (hematologic cancer)
0060058 (lymphoma)
14566 (disease of cellular proliferation)
0060083 (immune system cancer)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100104 (lymphoma cell line sample)
0104973 (Hodgkin lymphoma cell line sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)

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