FFCP PHASE1:Hg19::chr17:27038063..27038117,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=147011 | |EntrezGene=147011 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28600 | |HGNC=28600 | ||
|TSSclassifier=strong | |||
|UniProt=G5E9R8 | |UniProt=G5E9R8 | ||
|association_with_transcript=0bp_to_ENST00000439862,uc002hcb.3,uc010crv.2_5end | |association_with_transcript=0bp_to_ENST00000439862,uc002hcb.3,uc010crv.2_5end | ||
|cluster_id=chr17:27038063..27038117,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_2_at_PROCA1_5end | |description=CAGE_peak_2_at_PROCA1_5end | ||
|id=chr17:27038063..27038117,- | |id=chr17:27038063..27038117,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.13e-15;3!UBERON:0006241;7.52e-15;3!UBERON:0003057;7.52e-15;3!UBERON:0000358;4.06e-12;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.82e-16!57;UBERON:0005068!5.82e-16!57;UBERON:0006241!5.82e-16!57;UBERON:0007135!5.82e-16!57;UBERON:0001017!4.53e-15!82;UBERON:0005743!4.12e-14!86;UBERON:0002346!2.58e-13!90;UBERON:0000955!4.44e-13!69;UBERON:0006238!4.44e-13!69;UBERON:0002616!1.48e-12!59;UBERON:0000073!2.48e-12!94;UBERON:0001016!2.48e-12!94;UBERON:0003075!1.41e-11!86;UBERON:0007284!1.41e-11!86;UBERON:0001893!1.34e-10!34;UBERON:0002020!1.49e-10!34;UBERON:0003528!1.49e-10!34;UBERON:0002780!2.40e-10!41;UBERON:0001890!2.40e-10!41;UBERON:0006240!2.40e-10!41;UBERON:0002791!5.04e-10!33;UBERON:0003080!7.05e-10!42;UBERON:0007023!1.71e-09!115;UBERON:0001869!2.07e-09!32;UBERON:0000924!9.04e-09!173;UBERON:0006601!9.04e-09!173;UBERON:0003076!6.85e-08!15;UBERON:0003057!6.85e-08!15;UBERON:0000956!1.11e-07!25;UBERON:0000203!1.11e-07!25;UBERON:0004121!1.35e-07!169;UBERON:0000475!1.49e-07!365;UBERON:0002619!1.87e-07!22;UBERON:0001950!2.86e-07!20;UBERON:0004733!5.72e-07!12;UBERON:0002028!5.72e-07!12;UBERON:0007277!5.72e-07!12 | |ontology_enrichment_uberon=UBERON:0001049!5.82e-16!57;UBERON:0005068!5.82e-16!57;UBERON:0006241!5.82e-16!57;UBERON:0007135!5.82e-16!57;UBERON:0001017!4.53e-15!82;UBERON:0005743!4.12e-14!86;UBERON:0002346!2.58e-13!90;UBERON:0000955!4.44e-13!69;UBERON:0006238!4.44e-13!69;UBERON:0002616!1.48e-12!59;UBERON:0000073!2.48e-12!94;UBERON:0001016!2.48e-12!94;UBERON:0003075!1.41e-11!86;UBERON:0007284!1.41e-11!86;UBERON:0001893!1.34e-10!34;UBERON:0002020!1.49e-10!34;UBERON:0003528!1.49e-10!34;UBERON:0002780!2.40e-10!41;UBERON:0001890!2.40e-10!41;UBERON:0006240!2.40e-10!41;UBERON:0002791!5.04e-10!33;UBERON:0003080!7.05e-10!42;UBERON:0007023!1.71e-09!115;UBERON:0001869!2.07e-09!32;UBERON:0000924!9.04e-09!173;UBERON:0006601!9.04e-09!173;UBERON:0003076!6.85e-08!15;UBERON:0003057!6.85e-08!15;UBERON:0000956!1.11e-07!25;UBERON:0000203!1.11e-07!25;UBERON:0004121!1.35e-07!169;UBERON:0000475!1.49e-07!365;UBERON:0002619!1.87e-07!22;UBERON:0001950!2.86e-07!20;UBERON:0004733!5.72e-07!12;UBERON:0002028!5.72e-07!12;UBERON:0007277!5.72e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0002240;7.52e-15;3!UBERON:0005174;7.52e-15;3!UBERON:0001137;7.52e-15;3!UBERON:0002037;5.26e-08;6!UBERON:0002619;1.81e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,4.94e-15,3;UBERON:0005174,4.94e-15,3;UBERON:0001137,4.94e-15,3;UBERON:0003076,1.71e-11,15;UBERON:0003057,1.71e-11,15;UBERON:0001049,8.55e-11,56;UBERON:0005068,8.55e-11,56;UBERON:0006241,8.55e-11,56;UBERON:0007135,8.55e-11,56;UBERON:0003075,5.46e-09,82;UBERON:0007284,5.46e-09,82;UBERON:0010371,1.57e-08,104;UBERON:0002346,1.60e-08,86;UBERON:0002037,5.74e-08,6;UBERON:0006215,5.74e-08,6;UBERON:0002619,2.01e-07,22;UBERON:0001017,4.04e-07,81 | |||
|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0.331397375727916,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0.722878304769133,0,0.144846518960824,0,0,0.0945348171640679,0,0,33.3341747141679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.44905874525234,0.225222960966644,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0.247266929278557,0,0,0,0.375355559615893,0,0.438977620880838,0,0,0,0.358779271377724,0.213557388818567,0,0,0,0.257640540045629,0,0,0.292311015483596,0.252433774244115,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0.252320850875628,0,0,0,1.38134921352481,0.464367928031979,0,0,0,0,0,0.217879444092406,0.237270619111097,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0.16798212819886,0,0.0895585227028483,0,0,0,0.088048434013226,0,0.288239906833923,0,0.063497894292169,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0.301439377059586,0,0,0,0,0,0,0,0,0,0.205476322550383,0.358121926479791,0,0,0,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0.315404830067869,0,0,0,1.03473071292505,0,0.184369168541703,0.173767228936166,0.195801157462741,0.343143423810856,0,0,0,0,0,0.604780586659361,0.248107807818777,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0,0.241718899183244,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636406495851874,0,0,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0.35667105148125,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0.228234679033192,0,0,0,0,0.201799707191048,0,0,0.307240764308458,0,0,0.390776190804081,0.556812347790485,0,0,0.33307196799782,0,0,0,0.121360521749513,0,0.284136146806413,0,0,0,0.994147647766298,0.140669416410513,0.222617410045812,0.16480387422676,0.211125408127993,0,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0.520855522170466,0.174919999992391,0,0.1137934482855,0,0,0.689486746482929,0,0.347249989866585,0,0.482385754501632,3.05163472634166,0.663475559587348,1.18219047581419,0.658156191461918,0,0,0.0769502585037971,0,0,0,0.217294743844016,0,0,0,0,0.156980256395025,0,0,0,0.167821586975843,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0.247127877893006,0,0.539209063845416,0.802577647298789,0.468528891450678,0,0,0,0,1.20990716048664,0,0.063186579628488,0.60129367765797,0.103688191397247,0,0.330991955875499,0,0,0,0.138674673013139,0,0.195984794828755,0,0.698906672968121,0.171986032471617,0.19351266257817,0.219267951258557,0.246346371159628,0.0969890164884194,0,0,0.137041924646751,0,0.0633107959558787,0,0,0.213452994739353,1.59847687665704,0,0.114536596165916,0,0,0.124252535565433,0.235694034616795,0.135904206073614,0.313808538937,0.509991088181609,0,0,0.273810757783986,0,0,0,0.279282401272254,0.916641696046735,0,0.399358000997982,0,0,0.134366944973453,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0.196854963029498,0.0846733320657845,0,1.36203406111576,0.321506296930038,0.412618309791701,0,0,0,0.121499113316049,0,0,0,0,0.179287339332845,0.191915197319445,0,0,0.5085370753095,0,0,0,0,0,0.511164065356265,0.113312091520126,0,0,0.258565912723101,0.66116300871345,0.171086837884329,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0.573409195690071,0.998361463831671,0.310482014706917,0,0.124980407962107,0,0.570930667089935,0,0.468334905806882,0.28984205722165,0.149254802886874,0.233713309847224,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0,0.310874401165561,0.147855149989634,0.159296767163702,0,0,0,0.265841714557995,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0.231522474323834,0,0.179088841081487,0,0,0,0.38582807654183,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0.215649622793364,0,0,0.169732529954025,0.637724760305049,0.495743057036009,0,0,0.0788617450012534,0,0,0,0.321146125482298,0,0.638535436228605,0,1.26035848110859,0.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| ||
|short_description=p2@PROCA1 | |short_description=p2@PROCA1 | ||
}} | }} |
Latest revision as of 06:54, 19 September 2015
Short description: | p2@PROCA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PROCA1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000439862, uc002hcb.3, uc010crv.2_5end |
EntrezGene: | PROCA1 |
HGNC: | 28600 |
UniProt: | G5E9R8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spinal cord | 4.94e-15 | 3 |
dorsal region element | 4.94e-15 | 3 |
dorsum | 4.94e-15 | 3 |
posterior neural tube | 1.71e-11 | 15 |
chordal neural plate | 1.71e-11 | 15 |
neural tube | 8.55e-11 | 56 |
neural rod | 8.55e-11 | 56 |
future spinal cord | 8.55e-11 | 56 |
neural keel | 8.55e-11 | 56 |
neural plate | 5.46e-09 | 82 |
presumptive neural plate | 5.46e-09 | 82 |
ecto-epithelium | 1.57e-08 | 104 |
neurectoderm | 1.60e-08 | 86 |
cerebellum | 5.74e-08 | 6 |
rhombic lip | 5.74e-08 | 6 |
regional part of cerebral cortex | 2.01e-07 | 22 |
central nervous system | 4.04e-07 | 81 |