FFCP PHASE1:Hg19::chr19:43967397..43967419,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:43967397..43967419,- | |||
|coexpression_cluster_id=C1454 | |coexpression_cluster_id=C1454 | ||
|description=CAGE_peak_at_chr19:43967397..43967419,- | |description=CAGE_peak_at_chr19:43967397..43967419,- | ||
|id=chr19:43967397..43967419,- | |id=chr19:43967397..43967419,- | ||
|ontology_enrichment_celltype=CL:0002076!2.59e-08!43;CL:0002159!1.40e-07!13;CL:0000860!2.15e-07!45;CL:0000066!6.98e-07!254;CL:0002057!8.45e-07!42 | |ontology_enrichment_celltype=CL:0002076!2.59e-08!43;CL:0002159!1.40e-07!13;CL:0000860!2.15e-07!45;CL:0000066!6.98e-07!254;CL:0002057!8.45e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0002159;2.53e-13;14!CL:0000244;8.75e-13;4!CL:0000731;8.75e-13;4!CL:0000575;2.53e-12;2!CL:0000312;4.98e-10;5!CL:0000362;1.57e-09;9!CL:0000240;1.95e-08;6!CL:0000311;1.95e-08;6!CL:0000079;1.95e-08;6!CL:0000237;1.95e-08;6!CL:0002577;3.73e-08;3!CL:0000860;2.70e-07;33!CL:0002057;2.70e-07;33!CL:0000349;5.94e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,2.71e-13,14;CL:0000244,5.27e-13,4;CL:0000731,5.27e-13,4;CL:0000575,2.40e-12,2;CL:0000312,7.27e-10,5;CL:0000362,1.72e-09,9;CL:0000240,2.66e-08,6;CL:0000311,2.66e-08,6;CL:0000079,2.66e-08,6;CL:0000237,2.66e-08,6;CL:0000036,2.66e-08,6;CL:0000357,2.66e-08,6;CL:0000114,2.66e-08,6;CL:0002577,2.84e-08,3;CL:0000349,5.61e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000357;1.95e-08;6!CL:0000114;1.95e-08;6!UBERON:0009143;3.13e-07;1!UBERON:0000358;6.79e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.79e-11!14;UBERON:0000158!1.79e-11!14;UBERON:0001004!3.59e-10!72;UBERON:0004119!9.72e-10!169;UBERON:0000925!9.72e-10!169;UBERON:0006595!9.72e-10!169;UBERON:0003124!2.27e-08!7;UBERON:0000161!6.89e-08!35;UBERON:0000065!8.16e-08!53;UBERON:0005910!2.32e-07!6;UBERON:0000077!6.16e-07!130;UBERON:0000365!8.10e-07!5 | |ontology_enrichment_uberon=UBERON:0005631!1.79e-11!14;UBERON:0000158!1.79e-11!14;UBERON:0001004!3.59e-10!72;UBERON:0004119!9.72e-10!169;UBERON:0000925!9.72e-10!169;UBERON:0006595!9.72e-10!169;UBERON:0003124!2.27e-08!7;UBERON:0000161!6.89e-08!35;UBERON:0000065!8.16e-08!53;UBERON:0005910!2.32e-07!6;UBERON:0000077!6.16e-07!130;UBERON:0000365!8.10e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;2.51e-10;5!UBERON:0005910;1.10e-08;6!UBERON:0001723;1.33e-08;3!UBERON:0001033;1.33e-08;3!UBERON:0001043;2.28e-08;3!UBERON:0000478;1.22e-07;24!UBERON:0000305;1.47e-07;7!UBERON:0002372;6.79e-07;1!UBERON:0001961;6.79e-07;1!UBERON:0001744;6.79e-07;1!UBERON:0001042;6.79e-07;1!UBERON:0001735;6.79e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.68e-10,5;UBERON:0005631,1.46e-09,14;UBERON:0000158,1.46e-09,14;UBERON:0005910,7.92e-09,6;UBERON:0001723,1.46e-08,3;UBERON:0001033,1.46e-08,3;UBERON:0010056,1.46e-08,3;UBERON:0001043,2.12e-08,3;UBERON:0009143,2.12e-08,3;UBERON:0000478,1.20e-07,24;UBERON:0000305,1.58e-07,7;UBERON:0002372,6.99e-07,1;UBERON:0001961,6.99e-07,1;UBERON:0001744,6.99e-07,1;UBERON:0001735,6.99e-07,1 | |||
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|short_description=p@chr19:43967397..43967419,- | |short_description=p@chr19:43967397..43967419,- | ||
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Latest revision as of 14:26, 27 July 2015
Short description: | p@chr19:43967397..43967419, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:43967397..43967419, - |
Coexpression cluster: | C1454_tongue_esophagus_CD14_throat_skin_amniotic_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 2.71e-13 | 14 |
transitional epithelial cell | 5.27e-13 | 4 |
urothelial cell | 5.27e-13 | 4 |
corneal epithelial cell | 2.40e-12 | 2 |
keratinocyte | 7.27e-10 | 5 |
epidermal cell | 1.72e-09 | 9 |
stratified squamous epithelial cell | 2.66e-08 | 6 |
keratin accumulating cell | 2.66e-08 | 6 |
stratified epithelial cell | 2.66e-08 | 6 |
keratinizing barrier epithelial cell | 2.66e-08 | 6 |
epithelial fate stem cell | 2.66e-08 | 6 |
stratified epithelial stem cell | 2.66e-08 | 6 |
surface ectodermal cell | 2.66e-08 | 6 |
placental epithelial cell | 2.84e-08 | 3 |
extraembryonic cell | 5.61e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.68e-10 | 5 |
extraembryonic membrane | 1.46e-09 | 14 |
membranous layer | 1.46e-09 | 14 |
transitional epithelium | 7.92e-09 | 6 |
tongue | 1.46e-08 | 3 |
gustatory system | 1.46e-08 | 3 |
future tongue | 1.46e-08 | 3 |
esophagus | 2.12e-08 | 3 |
esophageal region | 2.12e-08 | 3 |
extraembryonic structure | 1.20e-07 | 24 |
amnion | 1.58e-07 | 7 |
tonsil | 6.99e-07 | 1 |
mucosa-associated lymphoid tissue | 6.99e-07 | 1 |
lymphoid tissue | 6.99e-07 | 1 |
tonsillar ring | 6.99e-07 | 1 |