FFCP PHASE1:Hg19::chr1:150704763..150704777,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1520 | |EntrezGene=1520 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2545 | |HGNC=2545 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=189bp_to_AK024855_5end | |association_with_transcript=189bp_to_AK024855_5end | ||
|cluster_id=chr1:150704763..150704777,- | |||
|coexpression_cluster_id=C13 | |coexpression_cluster_id=C13 | ||
|description=CAGE_peak_12_at_CTSS_5end | |description=CAGE_peak_12_at_CTSS_5end | ||
|id=chr1:150704763..150704777,- | |id=chr1:150704763..150704777,- | ||
|ontology_enrichment_celltype=CL:0000766!2.05e-68!76;CL:0002009!2.19e-67!65;CL:0002194!6.42e-64!63;CL:0000576!6.42e-64!63;CL:0000040!6.42e-64!63;CL:0000559!6.42e-64!63;CL:0000557!2.47e-60!71;CL:0000839!5.61e-56!70;CL:0002057!9.50e-55!42;CL:0000763!2.69e-53!112;CL:0000049!2.69e-53!112;CL:0000860!2.98e-50!45;CL:0000738!1.67e-48!140;CL:0002087!8.09e-43!119;CL:0000037!3.31e-42!172;CL:0000566!3.31e-42!172;CL:0002032!1.01e-41!165;CL:0000837!1.01e-41!165;CL:0002031!2.08e-40!124;CL:0000988!1.05e-38!182;CL:0002393!2.69e-14!9;CL:0002397!2.69e-14!9;CL:0000094!2.98e-11!8;CL:0000134!7.93e-11!358;CL:0002320!2.96e-10!365;CL:0000219!2.82e-08!390;CL:0000840!6.13e-08!5;CL:0001029!6.13e-08!5;CL:0000081!8.11e-08!11;CL:0000048!1.22e-07!430;CL:0000723!2.79e-07!436;CL:0000875!3.34e-07!3;CL:0002396!3.34e-07!3;CL:0000775!6.62e-07!3;CL:0000034!8.08e-07!444;CL:0000235!9.32e-07!10 | |ontology_enrichment_celltype=CL:0000766!2.05e-68!76;CL:0002009!2.19e-67!65;CL:0002194!6.42e-64!63;CL:0000576!6.42e-64!63;CL:0000040!6.42e-64!63;CL:0000559!6.42e-64!63;CL:0000557!2.47e-60!71;CL:0000839!5.61e-56!70;CL:0002057!9.50e-55!42;CL:0000763!2.69e-53!112;CL:0000049!2.69e-53!112;CL:0000860!2.98e-50!45;CL:0000738!1.67e-48!140;CL:0002087!8.09e-43!119;CL:0000037!3.31e-42!172;CL:0000566!3.31e-42!172;CL:0002032!1.01e-41!165;CL:0000837!1.01e-41!165;CL:0002031!2.08e-40!124;CL:0000988!1.05e-38!182;CL:0002393!2.69e-14!9;CL:0002397!2.69e-14!9;CL:0000094!2.98e-11!8;CL:0000134!7.93e-11!358;CL:0002320!2.96e-10!365;CL:0000219!2.82e-08!390;CL:0000840!6.13e-08!5;CL:0001029!6.13e-08!5;CL:0000081!8.11e-08!11;CL:0000048!1.22e-07!430;CL:0000723!2.79e-07!436;CL:0000875!3.34e-07!3;CL:0002396!3.34e-07!3;CL:0000775!6.62e-07!3;CL:0000034!8.08e-07!444;CL:0000235!9.32e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000576;9.38e-40;48!CL:0000766;1.79e-32;69!CL:0000473;8.43e-30;39!CL:0000234;8.43e-30;39!CL:0000860;1.13e-25;33!CL:0002057;1.13e-25;33!CL:0002393;3.55e-23;6!CL:0002397;3.55e-23;6!CL:0000875;1.55e-17;3!CL:0002396;1.55e-17;3!CL:0000235;7.58e-15;6!CL:0000763;1.73e-14;100!CL:0000738;3.66e-13;136!CL:0002087;1.69e-10;104!CL:0000775;8.32e-09;3!CL:0000988;2.55e-07;177!CL:0000219;3.70e-07;193!CL:0000094;6.14e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.42e-71,48;CL:0000234,3.42e-71,48;CL:0002009,3.84e-68,61;CL:0000766,4.58e-66,72;CL:0002194,1.71e-65,59;CL:0000576,1.71e-65,59;CL:0000040,1.71e-65,59;CL:0000559,1.71e-65,59;CL:0000557,1.28e-61,67;CL:0000839,4.68e-58,66;CL:0000860,9.11e-58,42;CL:0002057,9.11e-58,42;CL:0000763,2.30e-45,108;CL:0000049,2.30e-45,108;CL:0000738,6.91e-40,136;CL:0002393,1.69e-38,9;CL:0002397,1.69e-38,9;CL:0002087,3.10e-36,115;CL:0002031,1.53e-34,120;CL:0000037,3.91e-31,168;CL:0002032,1.45e-30,161;CL:0000837,1.45e-30,161;CL:0000988,3.09e-29,177;CL:0000875,1.60e-17,3;CL:0002396,1.60e-17,3;CL:0000235,5.22e-15,6;CL:0000134,2.09e-11,354;CL:0002320,4.68e-11,361;CL:0000219,7.96e-10,386;CL:0000775,8.35e-09,3;CL:0000048,2.57e-08,427;CL:0000723,4.15e-08,433;CL:0000034,7.72e-08,441;CL:0000094,5.74e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.30e-42;42!CL:0000049;1.54e-12;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.99e-65!112;UBERON:0002390!5.25e-65!102;UBERON:0003061!5.25e-65!102;UBERON:0002371!9.96e-52!80;UBERON:0001474!5.44e-47!86;UBERON:0002405!7.53e-43!115;UBERON:0004765!1.28e-37!101;UBERON:0001434!1.28e-37!101;UBERON:0003081!3.17e-25!216;UBERON:0002204!2.14e-19!167;UBERON:0000178!3.95e-11!15;UBERON:0000179!3.95e-11!15;UBERON:0000463!3.95e-11!15;UBERON:0002384!5.38e-10!375 | |ontology_enrichment_uberon=UBERON:0002193!1.99e-65!112;UBERON:0002390!5.25e-65!102;UBERON:0003061!5.25e-65!102;UBERON:0002371!9.96e-52!80;UBERON:0001474!5.44e-47!86;UBERON:0002405!7.53e-43!115;UBERON:0004765!1.28e-37!101;UBERON:0001434!1.28e-37!101;UBERON:0003081!3.17e-25!216;UBERON:0002204!2.14e-19!167;UBERON:0000178!3.95e-11!15;UBERON:0000179!3.95e-11!15;UBERON:0000463!3.95e-11!15;UBERON:0002384!5.38e-10!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.80e-54,76;UBERON:0002390,1.11e-53,98;UBERON:0003061,1.11e-53,98;UBERON:0001474,1.99e-49,82;UBERON:0002193,3.46e-48,108;UBERON:0004765,1.44e-44,90;UBERON:0002405,5.86e-43,93;UBERON:0001434,1.42e-39,100;UBERON:0003081,8.17e-23,203;UBERON:0002204,2.00e-21,167;UBERON:0000926,1.93e-12,315;UBERON:0004120,1.93e-12,315;UBERON:0006603,1.93e-12,315;UBERON:0002384,1.40e-10,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0.393364276848904,0.383829398097213,0.928896739896456,0,0,0,0,0.142169232487422,0,0,1.20326668482085,1.30206522429511,1.79132379391939,0.647787332037959,0.515151135268373,1.16318591023652,1.13362783106643,1.4555043671269,0.464858073811369,0,0.619412741790207,1.43846196161075,0.256160706529101,0.236482229888585,0.344745680736619,0.645484683583826,0,1.31769637679823,0.272906150057846,0.449446968890169,0.918251677112708,0,0.639337125799041,0.989553900560148,0.598390972864896,0.426224750532694,1.16083695451434,0,0.622822248995575,2.51248665256743,1.0429658368404,1.08594422352558,1.21079900526674,1.10483290796269,1.58231193720442,2.11255286311942,3.82687739937078,2.30624510059213,2.80821577866238,2.25265339262259,0.803627933485401,3.42015292489498,2.38700012638908,1.27864907635244,0,0.546138611262131,0,0,0,1.14950487990897,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0,0,0.221533894583621,0,0,0.130059347559878,0.164437904603676,0,0,0.296573126324121,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0.664789802594326,1.43094374583205,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.492434012174795,1.40402559083543,0.743155811443641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.50677127429638,14.7583757638122,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,13.4821264310493,26.9245313283622,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2942852049117,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,1.13929437434833,0.714695326373367,1.23408681925858,0.648473311192717,1.62009431171434,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0.614481528616916,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.674921674654501,1.5476039091159,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0.496166021811951,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0.393364276848904,0.383829398097213,0.928896739896456,0,0,0,0,0.142169232487422,0,0,1.20326668482085,1.30206522429511,1.79132379391939,0.647787332037959,0.515151135268373,1.16318591023652,1.13362783106643,1.4555043671269,0.464858073811369,0,0.619412741790207,1.43846196161075,0.256160706529101,0.236482229888585,0.344745680736619,0.645484683583826,0,1.31769637679823,0.272906150057846,0.449446968890169,0.918251677112708,0,0.639337125799041,0.989553900560148,0.598390972864896,0.426224750532694,1.16083695451434,0,0.622822248995575,2.51248665256743,1.0429658368404,1.08594422352558,1.21079900526674,1.10483290796269,1.58231193720442,2.11255286311942,3.82687739937078,2.30624510059213,2.80821577866238,2.25265339262259,0.803627933485401,3.42015292489498,2.38700012638908,1.27864907635244,0,0.546138611262131,0,0,0,1.14950487990897,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0,0,0.221533894583621,0,0,0.130059347559878,0.164437904603676,0,0,0.296573126324121,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0.664789802594326,1.43094374583205,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.492434012174795,1.40402559083543,0.743155811443641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.50677127429638,14.7583757638122,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,13.4821264310493,26.9245313283622,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2942852049117,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,1.13929437434833,0.714695326373367,1.23408681925858,0.648473311192717,1.62009431171434,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0.614481528616916,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.674921674654501,1.5476039091159,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0.496166021811951,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p12@CTSS | |short_description=p12@CTSS | ||
}} | }} |
Latest revision as of 23:01, 16 September 2015
Short description: | p12@CTSS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CTSS_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 189bp_to_AK024855_5end |
EntrezGene: | CTSS |
HGNC: | 2545 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.80e-54 | 76 |
hematopoietic system | 1.11e-53 | 98 |
blood island | 1.11e-53 | 98 |
bone element | 1.99e-49 | 82 |
hemolymphoid system | 3.46e-48 | 108 |
skeletal element | 1.44e-44 | 90 |
immune system | 5.86e-43 | 93 |
skeletal system | 1.42e-39 | 100 |
lateral plate mesoderm | 8.17e-23 | 203 |
musculoskeletal system | 2.00e-21 | 167 |
mesoderm | 1.93e-12 | 315 |
mesoderm-derived structure | 1.93e-12 | 315 |
presumptive mesoderm | 1.93e-12 | 315 |
connective tissue | 1.40e-10 | 371 |