FFCP PHASE1:Hg19::chr18:8783586..8783597,+: Difference between revisions
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|id=chr18:8783586..8783597,+
|short_description=p2@CCDC165
|description=CAGE_peak_2_at_CCDC165_5end
|association_with_transcript=58bp_to_uc010dkw.1_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23255 | |EntrezGene=23255 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29121 | |HGNC=29121 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=58bp_to_uc010dkw.1_5end | |||
|cluster_id=chr18:8783586..8783597,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_2_at_CCDC165_5end | |||
|id=chr18:8783586..8783597,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.27e-147;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!2.80e-32!12;UBERON:0002028!2.80e-32!12;UBERON:0007277!2.80e-32!12;UBERON:0004732!8.21e-30!13;UBERON:0002680!7.07e-28!9;UBERON:0001895!7.07e-28!9;UBERON:0010092!7.07e-28!9;UBERON:0003076!7.33e-26!15;UBERON:0003057!7.33e-26!15;UBERON:0002037!4.91e-24!6;UBERON:0006215!4.91e-24!6;UBERON:0001301!1.04e-16!1;UBERON:0002902!2.63e-16!1;UBERON:0009899!2.63e-16!1;UBERON:0001017!5.49e-14!82;UBERON:0005743!2.58e-13!86;UBERON:0000955!3.57e-13!69;UBERON:0006238!3.57e-13!69;UBERON:0001049!1.56e-12!57;UBERON:0005068!1.56e-12!57;UBERON:0006241!1.56e-12!57;UBERON:0007135!1.56e-12!57;UBERON:0007023!2.08e-12!115;UBERON:0002616!4.21e-12!59;UBERON:0000073!5.26e-12!94;UBERON:0001016!5.26e-12!94;UBERON:0003075!1.14e-10!86;UBERON:0007284!1.14e-10!86;UBERON:0002346!3.61e-10!90;UBERON:0004121!9.96e-10!169;UBERON:0000924!1.76e-09!173;UBERON:0006601!1.76e-09!173;UBERON:0000033!4.11e-09!123;UBERON:0002360!4.70e-09!2;UBERON:0000094!4.70e-09!2;UBERON:0007645!4.70e-09!2;UBERON:0002298!1.17e-08!8;UBERON:0000153!1.18e-08!129;UBERON:0007811!1.18e-08!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.58e-74;6!UBERON:0004733;5.11e-66;12!UBERON:0002028;5.11e-66;12!UBERON:0004732;4.89e-61;13!UBERON:0002680;5.60e-50;9!UBERON:0001895;5.60e-50;9!UBERON:0001896;1.12e-17;3!UBERON:0005290;1.12e-17;3!UBERON:0000073;1.58e-11;53!UBERON:0002616;1.58e-11;53!UBERON:0002298;1.57e-09;6!UBERON:0000955;1.83e-08;68!UBERON:0001016;8.04e-08;83!UBERON:0001017;5.85e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.58e-74,6;UBERON:0006215,2.58e-74,6;UBERON:0004733,5.11e-66,12;UBERON:0002028,5.11e-66,12;UBERON:0007277,5.11e-66,12;UBERON:0004732,4.89e-61,13;UBERON:0003076,4.60e-53,15;UBERON:0003057,4.60e-53,15;UBERON:0002680,5.60e-50,9;UBERON:0001895,5.60e-50,9;UBERON:0010092,5.60e-50,9;UBERON:0001896,1.12e-17,3;UBERON:0005290,1.12e-17,3;UBERON:0010096,1.12e-17,3;UBERON:0000073,1.70e-15,53;UBERON:0002616,1.70e-15,53;UBERON:0001049,9.92e-15,56;UBERON:0005068,9.92e-15,56;UBERON:0006241,9.92e-15,56;UBERON:0007135,9.92e-15,56;UBERON:0000955,3.68e-12,68;UBERON:0006238,3.68e-12,68;UBERON:0001017,2.17e-10,81;UBERON:0003075,2.17e-10,82;UBERON:0007284,2.17e-10,82;UBERON:0002346,5.98e-10,86;UBERON:0002298,1.57e-09,6;UBERON:0001016,1.88e-09,89;UBERON:0010371,2.22e-08,104;UBERON:0007023,8.86e-08,114;UBERON:0010314,8.99e-07,132 | |||
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|short_description=p2@CCDC165 | |||
}} | }} |
Latest revision as of 20:49, 24 September 2015
Short description: | p2@CCDC165 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCDC165_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 58bp_to_uc010dkw.1_5end |
EntrezGene: | CCDC165 |
HGNC: | 29121 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.58e-74 | 6 |
rhombic lip | 2.58e-74 | 6 |
segmental subdivision of hindbrain | 5.11e-66 | 12 |
hindbrain | 5.11e-66 | 12 |
presumptive hindbrain | 5.11e-66 | 12 |
segmental subdivision of nervous system | 4.89e-61 | 13 |
posterior neural tube | 4.60e-53 | 15 |
chordal neural plate | 4.60e-53 | 15 |
regional part of metencephalon | 5.60e-50 | 9 |
metencephalon | 5.60e-50 | 9 |
future metencephalon | 5.60e-50 | 9 |
medulla oblongata | 1.12e-17 | 3 |
myelencephalon | 1.12e-17 | 3 |
future myelencephalon | 1.12e-17 | 3 |
regional part of nervous system | 1.70e-15 | 53 |
regional part of brain | 1.70e-15 | 53 |
neural tube | 9.92e-15 | 56 |
neural rod | 9.92e-15 | 56 |
future spinal cord | 9.92e-15 | 56 |
neural keel | 9.92e-15 | 56 |
brain | 3.68e-12 | 68 |
future brain | 3.68e-12 | 68 |
central nervous system | 2.17e-10 | 81 |
neural plate | 2.17e-10 | 82 |
presumptive neural plate | 2.17e-10 | 82 |
neurectoderm | 5.98e-10 | 86 |
brainstem | 1.57e-09 | 6 |
nervous system | 1.88e-09 | 89 |
ecto-epithelium | 2.22e-08 | 104 |
adult organism | 8.86e-08 | 114 |
structure with developmental contribution from neural crest | 8.99e-07 | 132 |