FFCP PHASE1:Hg19::chr19:12444519..12444537,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:12444519..12444537,-
|short_description=p3@ZNF563
|description=CAGE_peak_3_at_ZNF563_5end
|association_with_transcript=0bp_to_ENST00000318168,NM_145276,uc...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=147837 | |EntrezGene=147837 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30498 | |HGNC=30498 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TA94 | |UniProt=Q8TA94 | ||
|association_with_transcript=0bp_to_ENST00000318168,NM_145276,uc002mtp.2,uc002mtq.2_5end | |||
|cluster_id=chr19:12444519..12444537,- | |||
|description=CAGE_peak_3_at_ZNF563_5end | |||
|id=chr19:12444519..12444537,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.32e-19!115;UBERON:0001049!2.76e-13!57;UBERON:0005068!2.76e-13!57;UBERON:0006241!2.76e-13!57;UBERON:0007135!2.76e-13!57;UBERON:0002616!1.22e-11!59;UBERON:0003075!3.79e-11!86;UBERON:0007284!3.79e-11!86;UBERON:0003080!4.49e-11!42;UBERON:0002780!1.18e-10!41;UBERON:0001890!1.18e-10!41;UBERON:0006240!1.18e-10!41;UBERON:0002346!1.87e-10!90;UBERON:0001017!2.15e-09!82;UBERON:0005743!2.74e-09!86;UBERON:0000955!8.64e-09!69;UBERON:0006238!8.64e-09!69;UBERON:0000073!3.04e-08!94;UBERON:0001016!3.04e-08!94;UBERON:0003056!6.19e-08!61;UBERON:0001893!4.88e-07!34;UBERON:0002020!6.45e-07!34;UBERON:0003528!6.45e-07!34;UBERON:0004121!7.31e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001894;9.79e-10;7!UBERON:0000073;3.29e-07;53!UBERON:0002616;3.29e-07;53!UBERON:0002780;3.97e-07;41!UBERON:0001890;3.97e-07;41!UBERON:0003296;9.96e-07;4!UBERON:0010133;9.96e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.39e-19,114;UBERON:0001049,3.47e-12,56;UBERON:0005068,3.47e-12,56;UBERON:0006241,3.47e-12,56;UBERON:0007135,3.47e-12,56;UBERON:0000073,4.40e-11,53;UBERON:0002616,4.40e-11,53;UBERON:0002780,2.18e-10,41;UBERON:0001890,2.18e-10,41;UBERON:0003080,2.18e-10,41;UBERON:0006240,2.18e-10,41;UBERON:0003075,3.15e-10,82;UBERON:0007284,3.15e-10,82;UBERON:0001894,8.97e-10,7;UBERON:0006222,8.97e-10,7;UBERON:0002346,3.04e-09,86;UBERON:0010314,3.23e-09,132;UBERON:0010371,8.39e-09,104;UBERON:0000955,9.67e-08,68;UBERON:0006238,9.67e-08,68;UBERON:0001017,1.36e-07,81;UBERON:0003056,3.18e-07,61 | |||
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| ||
|short_description=p3@ZNF563 | |||
}} | }} |
Latest revision as of 17:36, 15 September 2015
Short description: | p3@ZNF563 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZNF563_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000318168, NM_145276, uc002mtp.2, uc002mtq.2_5end |
EntrezGene: | ZNF563 |
HGNC: | 30498 |
UniProt: | Q8TA94 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.39e-19 | 114 |
neural tube | 3.47e-12 | 56 |
neural rod | 3.47e-12 | 56 |
future spinal cord | 3.47e-12 | 56 |
neural keel | 3.47e-12 | 56 |
regional part of nervous system | 4.40e-11 | 53 |
regional part of brain | 4.40e-11 | 53 |
regional part of forebrain | 2.18e-10 | 41 |
forebrain | 2.18e-10 | 41 |
anterior neural tube | 2.18e-10 | 41 |
future forebrain | 2.18e-10 | 41 |
neural plate | 3.15e-10 | 82 |
presumptive neural plate | 3.15e-10 | 82 |
diencephalon | 8.97e-10 | 7 |
future diencephalon | 8.97e-10 | 7 |
neurectoderm | 3.04e-09 | 86 |
structure with developmental contribution from neural crest | 3.23e-09 | 132 |
ecto-epithelium | 8.39e-09 | 104 |
brain | 9.67e-08 | 68 |
future brain | 9.67e-08 | 68 |
central nervous system | 1.36e-07 | 81 |
pre-chordal neural plate | 3.18e-07 | 61 |