FFCP PHASE1:Hg19::chr19:37708814..37708838,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:37708814..37708838,+
|short_description=p2@ZNF383
|description=CAGE_peak_2_at_ZNF383_5end
|association_with_transcript=0bp_to_uc002ofs.1_5end
|EntrezGene...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=163087 | |EntrezGene=163087 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18609 | |HGNC=18609 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NA42 | |UniProt=Q8NA42 | ||
|association_with_transcript=0bp_to_uc002ofs.1_5end | |||
|cluster_id=chr19:37708814..37708838,+ | |||
|description=CAGE_peak_2_at_ZNF383_5end | |||
|id=chr19:37708814..37708838,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.08e-07,18;CL:0000789,5.08e-07,18;CL:0002420,5.08e-07,18;CL:0002419,5.08e-07,18;CL:0000790,5.08e-07,18 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.00e-15!115;UBERON:0001049!1.83e-11!57;UBERON:0005068!1.83e-11!57;UBERON:0006241!1.83e-11!57;UBERON:0007135!1.83e-11!57;UBERON:0003080!7.53e-11!42;UBERON:0002780!2.73e-10!41;UBERON:0001890!2.73e-10!41;UBERON:0006240!2.73e-10!41;UBERON:0002616!1.98e-09!59;UBERON:0001893!7.13e-08!34;UBERON:0002020!7.18e-08!34;UBERON:0003528!7.18e-08!34;UBERON:0000955!1.72e-07!69;UBERON:0006238!1.72e-07!69;UBERON:0002791!2.10e-07!33;UBERON:0001950!5.61e-07!20;UBERON:0001869!6.76e-07!32;UBERON:0002346!8.65e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.59e-08;41!UBERON:0001890;1.59e-08;41!UBERON:0000073;1.01e-07;53!UBERON:0002616;1.01e-07;53!UBERON:0001950;3.04e-07;20!UBERON:0001893;7.72e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.48e-15,56;UBERON:0005068,6.48e-15,56;UBERON:0006241,6.48e-15,56;UBERON:0007135,6.48e-15,56;UBERON:0000073,9.35e-14,53;UBERON:0002616,9.35e-14,53;UBERON:0007023,1.64e-13,114;UBERON:0002346,5.88e-12,86;UBERON:0002780,2.06e-11,41;UBERON:0001890,2.06e-11,41;UBERON:0003080,2.06e-11,41;UBERON:0006240,2.06e-11,41;UBERON:0003075,2.52e-11,82;UBERON:0007284,2.52e-11,82;UBERON:0000955,1.24e-08,68;UBERON:0006238,1.24e-08,68;UBERON:0001893,1.48e-08,34;UBERON:0003528,1.50e-08,34;UBERON:0002020,1.50e-08,34;UBERON:0010371,4.22e-08,104;UBERON:0001017,4.43e-08,81;UBERON:0003056,5.13e-08,61;UBERON:0001950,2.70e-07,20;UBERON:0001016,3.38e-07,89;UBERON:0002791,5.21e-07,32;UBERON:0001869,5.93e-07,32 | |||
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| ||
|short_description=p2@ZNF383 | |||
}} | }} |
Latest revision as of 17:44, 17 September 2015
Short description: | p2@ZNF383 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZNF383_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002ofs.1_5end |
EntrezGene: | ZNF383 |
HGNC: | 18609 |
UniProt: | Q8NA42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.08e-07 | 18 |
alpha-beta T cell | 5.08e-07 | 18 |
immature T cell | 5.08e-07 | 18 |
mature T cell | 5.08e-07 | 18 |
immature alpha-beta T cell | 5.08e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
neural tube | 6.48e-15 | 56 |
neural rod | 6.48e-15 | 56 |
future spinal cord | 6.48e-15 | 56 |
neural keel | 6.48e-15 | 56 |
regional part of nervous system | 9.35e-14 | 53 |
regional part of brain | 9.35e-14 | 53 |
adult organism | 1.64e-13 | 114 |
neurectoderm | 5.88e-12 | 86 |
regional part of forebrain | 2.06e-11 | 41 |
forebrain | 2.06e-11 | 41 |
anterior neural tube | 2.06e-11 | 41 |
future forebrain | 2.06e-11 | 41 |
neural plate | 2.52e-11 | 82 |
presumptive neural plate | 2.52e-11 | 82 |
brain | 1.24e-08 | 68 |
future brain | 1.24e-08 | 68 |
telencephalon | 1.48e-08 | 34 |
brain grey matter | 1.50e-08 | 34 |
gray matter | 1.50e-08 | 34 |
ecto-epithelium | 4.22e-08 | 104 |
central nervous system | 4.43e-08 | 81 |
pre-chordal neural plate | 5.13e-08 | 61 |
neocortex | 2.70e-07 | 20 |
nervous system | 3.38e-07 | 89 |
regional part of telencephalon | 5.21e-07 | 32 |
cerebral hemisphere | 5.93e-07 | 32 |