FFCP PHASE1:Hg19::chr19:45451730..45451756,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:45451730..45451756,+
|short_description=p4@APOC2
|description=CAGE_peak_4_at_APOC2_5end
|association_with_transcript=0bp_to_BT006708,EU832654,EU832732,X00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=344 | |EntrezGene=344 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=609 | |HGNC=609 | ||
|TSSclassifier=strong | |||
|UniProt=P02655 | |UniProt=P02655 | ||
|association_with_transcript=0bp_to_BT006708,EU832654,EU832732,X00568_5end | |||
|cluster_id=chr19:45451730..45451756,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_APOC2_5end | |||
|id=chr19:45451730..45451756,+ | |||
|ontology_enrichment_celltype=CL:0000453!2.01e-12!5;CL:0000181!1.70e-10!12;CL:0000417!1.70e-10!12;CL:0000668!1.70e-10!12;CL:0000414!1.70e-10!12;CL:0000412!1.70e-10!12;CL:0000182!1.70e-10!12;CL:0000990!1.89e-09!8;CL:0000451!1.35e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.73e-18;12!CL:0000235;1.01e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.57e-18,12;CL:0000235,9.68e-10,6 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.25e-14;1!UBERON:0004161;1.37e-11;11!UBERON:0009497;6.80e-10;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;7.78e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,9.19e-08,2 | |||
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| ||
|short_description=p4@APOC2 | |||
}} | }} |
Latest revision as of 15:09, 18 September 2015
Short description: | p4@APOC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_APOC2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_BT006708, EU832654, EU832732, X00568_5end |
EntrezGene: | APOC2 |
HGNC: | 609 |
UniProt: | P02655 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.57e-18 | 12 |
macrophage | 9.68e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
liver | 3.41e-25 | 19 |
digestive gland | 3.41e-25 | 19 |
liver bud | 3.41e-25 | 19 |
hepatic diverticulum | 9.85e-22 | 22 |
liver primordium | 9.85e-22 | 22 |
digestive tract diverticulum | 8.85e-21 | 23 |
epithelial sac | 4.23e-19 | 25 |
epithelium of foregut-midgut junction | 4.23e-19 | 25 |
anatomical boundary | 4.23e-19 | 25 |
hepatobiliary system | 4.23e-19 | 25 |
foregut-midgut junction | 4.23e-19 | 25 |
septum transversum | 4.23e-19 | 25 |
sac | 2.34e-18 | 26 |
exocrine gland | 2.34e-15 | 31 |
exocrine system | 2.34e-15 | 31 |
cranial nerve II | 1.61e-14 | 1 |
cranial nerve | 1.61e-14 | 1 |
nerve trunk | 1.61e-14 | 1 |
nerve connecting eye with brain | 1.61e-14 | 1 |
nerve | 1.61e-14 | 1 |
retinal neural layer | 1.61e-14 | 1 |
presumptive neural retina | 1.61e-14 | 1 |
endocrine gland | 1.43e-13 | 35 |
endocrine system | 1.73e-10 | 45 |
gut epithelium | 1.10e-08 | 54 |
abdomen element | 1.10e-08 | 54 |
abdominal segment element | 1.10e-08 | 54 |
gland | 6.45e-08 | 59 |
neural tissue | 6.58e-08 | 2 |
multi cell component structure | 6.58e-08 | 2 |
neuron projection bundle | 6.58e-08 | 2 |
abdominal segment of trunk | 8.86e-08 | 60 |
abdomen | 8.86e-08 | 60 |
Ontology term | p-value | n |
---|---|---|
melanoma | 9.19e-08 | 2 |