FF:11762-123H7: Difference between revisions

Latest revision as of 18:18, 4 June 2020

Name:	mesenchymal precursor cell - ovarian cancer metastasis, donor3
Species:	Human (Homo sapiens)
Library ID:	CNhs12378
Sample type:	primary cells
Genomic View:	UCSC
RefEX:	Specific genes
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	ovary
dev stage	NA
sex	NA
age	NA
cell type	mesenchymal precursor cell
cell line	NA
company	NA
collaboration	Claudio Schneider LNCIB
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	NA
extraction protocol (Details)	NA

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005043

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs12378		CAGE		DRX008561		DRR009433

Accession ID Hg19

Library id		BAM		CTSS
CNhs12378		DRZ000858		DRZ002243

Accession ID Hg38

Library id		BAM		CTSS
CNhs12378		DRZ012208		DRZ013593

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.198
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.161
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.104
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.0374
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.343
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.0616
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.0102
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0.0608
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0.114
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.419
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0.162
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0.0608
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.0505
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.414
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0.114
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.0608
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.0608
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.162
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.934
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.753
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.881
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.817
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0.0671
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.279
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12378

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.816
MA0003.1	MA0003.1	0.406
MA0004.1	MA0004.1	0.135
MA0006.1	MA0006.1	0.102
MA0007.1	MA0007.1	0.241
MA0009.1	MA0009.1	0.367
MA0014.1	MA0014.1	0.967
MA0017.1	MA0017.1	0.517
MA0018.2	MA0018.2	0.0144
MA0019.1	MA0019.1	0.138
MA0024.1	MA0024.1	3.26936e-7
MA0025.1	MA0025.1	0.18
MA0027.1	MA0027.1	0.637
MA0028.1	MA0028.1	0.0503
MA0029.1	MA0029.1	0.697
MA0030.1	MA0030.1	0.371
MA0031.1	MA0031.1	0.13
MA0035.2	MA0035.2	0.987
MA0038.1	MA0038.1	0.05
MA0039.2	MA0039.2	0.892
MA0040.1	MA0040.1	0.38
MA0041.1	MA0041.1	0.468
MA0042.1	MA0042.1	0.54
MA0043.1	MA0043.1	0.379
MA0046.1	MA0046.1	0.335
MA0047.2	MA0047.2	0.25
MA0048.1	MA0048.1	0.149
MA0050.1	MA0050.1	0.0174
MA0051.1	MA0051.1	0.366
MA0052.1	MA0052.1	0.0982
MA0055.1	MA0055.1	0.124
MA0057.1	MA0057.1	0.489
MA0058.1	MA0058.1	0.161
MA0059.1	MA0059.1	0.593
MA0060.1	MA0060.1	9.57484e-9
MA0061.1	MA0061.1	0.0786
MA0062.2	MA0062.2	5.94609e-6
MA0065.2	MA0065.2	0.797
MA0066.1	MA0066.1	0.807
MA0067.1	MA0067.1	0.162
MA0068.1	MA0068.1	0.697
MA0069.1	MA0069.1	0.378
MA0070.1	MA0070.1	0.194
MA0071.1	MA0071.1	0.986
MA0072.1	MA0072.1	0.821
MA0073.1	MA0073.1	0.935
MA0074.1	MA0074.1	0.259
MA0076.1	MA0076.1	0.00655
MA0077.1	MA0077.1	0.183
MA0078.1	MA0078.1	0.922
MA0079.2	MA0079.2	0.8
MA0080.2	MA0080.2	1.42119e-8
MA0081.1	MA0081.1	9.10708e-5
MA0083.1	MA0083.1	5.94541e-6
MA0084.1	MA0084.1	0.871
MA0087.1	MA0087.1	0.564
MA0088.1	MA0088.1	0.198
MA0090.1	MA0090.1	0.0014
MA0091.1	MA0091.1	0.871
MA0092.1	MA0092.1	0.22
MA0093.1	MA0093.1	0.304
MA0099.2	MA0099.2	3.68853e-7
MA0100.1	MA0100.1	0.0607
MA0101.1	MA0101.1	0.217
MA0102.2	MA0102.2	0.9
MA0103.1	MA0103.1	0.035
MA0104.2	MA0104.2	0.044
MA0105.1	MA0105.1	0.369
MA0106.1	MA0106.1	0.188
MA0107.1	MA0107.1	0.0177
MA0108.2	MA0108.2	0.00646
MA0111.1	MA0111.1	0.11
MA0112.2	MA0112.2	0.0382
MA0113.1	MA0113.1	0.652
MA0114.1	MA0114.1	0.716
MA0115.1	MA0115.1	0.212
MA0116.1	MA0116.1	0.85
MA0117.1	MA0117.1	0.854
MA0119.1	MA0119.1	0.424
MA0122.1	MA0122.1	0.569
MA0124.1	MA0124.1	0.00782
MA0125.1	MA0125.1	0.129
MA0131.1	MA0131.1	0.105
MA0135.1	MA0135.1	0.0531
MA0136.1	MA0136.1	1.78917e-11
MA0137.2	MA0137.2	0.885
MA0138.2	MA0138.2	0.543
MA0139.1	MA0139.1	0.696
MA0140.1	MA0140.1	0.627
MA0141.1	MA0141.1	0.43
MA0142.1	MA0142.1	0.105
MA0143.1	MA0143.1	0.967
MA0144.1	MA0144.1	0.804
MA0145.1	MA0145.1	0.161
MA0146.1	MA0146.1	0.47
MA0147.1	MA0147.1	0.0414
MA0148.1	MA0148.1	0.648
MA0149.1	MA0149.1	0.651
MA0150.1	MA0150.1	0.0698
MA0152.1	MA0152.1	0.03
MA0153.1	MA0153.1	0.725
MA0154.1	MA0154.1	0.417
MA0155.1	MA0155.1	0.0476
MA0156.1	MA0156.1	1.08428e-5
MA0157.1	MA0157.1	0.142
MA0159.1	MA0159.1	0.987
MA0160.1	MA0160.1	0.23
MA0162.1	MA0162.1	0.107
MA0163.1	MA0163.1	0.622
MA0164.1	MA0164.1	0.547
MA0258.1	MA0258.1	0.331
MA0259.1	MA0259.1	0.0814

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12378

Novel motif	Logo	P-value
1	1	0.929
10	10	0.442
100	100	0.922
101	101	0.958
102	102	0.167
103	103	0.275
104	104	0.943
105	105	0.664
106	106	0.13
107	107	0.0756
108	108	0.588
109	109	0.777
11	11	0.613
110	110	0.127
111	111	0.0262
112	112	0.828
113	113	0.0212
114	114	0.735
115	115	0.0846
116	116	0.34
117	117	0.867
118	118	0.264
119	119	0.995
12	12	0.543
120	120	0.531
121	121	0.867
122	122	0.289
123	123	1.12643e-4
124	124	0.173
125	125	0.301
126	126	0.868
127	127	0.746
128	128	0.0506
129	129	0.534
13	13	0.569
130	130	0.829
131	131	0.0517
132	132	0.446
133	133	0.309
134	134	0.971
135	135	0.505
136	136	0.923
137	137	0.612
138	138	0.951
139	139	0.186
14	14	0.264
140	140	0.21
141	141	0.402
142	142	0.317
143	143	0.585
144	144	0.271
145	145	0.951
146	146	0.814
147	147	0.0827
148	148	0.257
149	149	0.0459
15	15	0.685
150	150	0.189
151	151	0.839
152	152	0.0529
153	153	0.703
154	154	0.934
155	155	0.134
156	156	0.611
157	157	0.657
158	158	0.0176
159	159	0.317
16	16	0.0203
160	160	0.836
161	161	0.792
162	162	0.423
163	163	0.02
164	164	0.0261
165	165	0.689
166	166	0.162
167	167	0.161
168	168	0.684
169	169	0.0718
17	17	0.537
18	18	0.454
19	19	0.312
2	2	0.152
20	20	0.47
21	21	0.974
22	22	0.2
23	23	0.0113
24	24	0.869
25	25	0.0462
26	26	0.492
27	27	0.806
28	28	0.758
29	29	0.208
3	3	0.462
30	30	0.286
31	31	0.568
32	32	9.42625e-16
33	33	0.692
34	34	0.305
35	35	0.643
36	36	0.0944
37	37	0.191
38	38	0.454
39	39	0.329
4	4	0.549
40	40	0.963
41	41	0.4
42	42	0.354
43	43	0.325
44	44	0.436
45	45	0.426
46	46	0.721
47	47	0.553
48	48	0.97
49	49	0.474
5	5	0.956
50	50	0.789
51	51	0.523
52	52	0.353
53	53	0.053
54	54	0.491
55	55	0.521
56	56	0.702
57	57	0.863
58	58	0.283
59	59	0.164
6	6	0.647
60	60	0.522
61	61	0.623
62	62	0.766
63	63	0.579
64	64	0.996
65	65	0.452
66	66	0.322
67	67	0.874
68	68	0.842
69	69	0.645
7	7	0.294
70	70	0.331
71	71	0.515
72	72	0.917
73	73	0.146
74	74	0.00927
75	75	0.637
76	76	0.575
77	77	0.00915
78	78	0.683
79	79	0.00352
8	8	0.313
80	80	0.443
81	81	0.713
82	82	0.421
83	83	0.565
84	84	0.654
85	85	0.0325
86	86	0.949
87	87	0.274
88	88	0.635
89	89	0.152
9	9	0.341
90	90	0.244
91	91	0.882
92	92	0.0401
93	93	0.971
94	94	0.929
95	95	0.91
96	96	0.916
97	97	0.105
98	98	0.0113
99	99	0.0659

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12378

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000274 human mesenchymal precursor cell- ovarian cancer-metastasis sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
193 (reproductive organ cancer)
2394 (ovarian cancer)
120 (female reproductive organ cancer)

UBERON: Anatomy
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000272 (human ovarian cancer mesenchymal precursor cell sample)
0000274 (human mesenchymal precursor cell- ovarian cancer-metastasis sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)

@@ Line 1: / Line 1: @@
 {{f5samples
+|DRA_sample_Accession=CAGE@SAMD00005043
+|accession_numbers=CAGE;DRX008561;DRR009433;DRZ000858;DRZ002243;DRZ012208;DRZ013593
 |ancestors_in_anatomy_facet=UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062
-|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000144,CL:0000723,CL:0000048,CL:0000548,CL:0000034,CL:0000012,CL:0002320,CL:0000063,CL:0002371,CL:0000219,CL:0000004,CL:0000134,CL:0000255
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034
 |ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:193,DOID:2394,DOID:120
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000272,FF:0000274
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr11:61520075..61520136,+!p1@C11orf9!2.00!202.25!C11orf9;;chr15:83953397..83953425,-!p1@BNC1!1.71!58.00!BNC1;;chr18:19749386..19749404,+!p2@GATA6!1.68!66.71!GATA6;;chr20:50179368..50179392,-!p2@NFATC2!1.53!41.77!NFATC2;;chr4:174451370..174451387,-!p1@HAND2!1.48!29.00!HAND2;;chr21:36260773..36260804,-!p7@RUNX1!1.47!38.02!RUNX1;;chr8:72756637..72756664,-!p3@MSC!1.43!29.00!MSC;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.28!18.18!ZBED1;;chr20:61051039..61051057,-!p1@GATA5!1.27!17.43!GATA5;;chr19:45971246..45971265,+!p1@FOSB!1.26!310.43!FOSB;;chr12:26277817..26277863,-!p2@BHLHE41!1.24!22.24!BHLHE41;;chr11:32457075..32457095,-!p1@WT1!1.23!16.08!WT1;;chr8:72756667..72756736,-!p2@MSC!1.21!23.89!MSC;;chr18:19749541..19749557,+!p1@GATA6!1.20!46.73!GATA6;;chr4:174450089..174450153,-!p2@HAND2!1.18!14.27!HAND2;;chr11:46299199..46299233,+!p1@CREB3L1!1.14!65.96!CREB3L1;;chr8:72756267..72756296,-!p4@MSC!1.13!18.18!MSC;;chr7:27183114..27183138,-!p3@HOXA5!1.12!12.17!HOXA5;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!1.11!12.02!SEBOX;;chr8:106330656..106330684,+!p1@ZFPM2!1.08!29.00!ZFPM2;;chr11:46299539..46299620,+!p2@CREB3L1!1.05!17.43!CREB3L1;;chr10:51572408..51572454,+!p3@NCOA4!1.03!58.15!NCOA4;;chr17:46622070..46622109,-!p1@HOXB2!1.03!22.24!HOXB2;;chr6:19837592..19837621,+!p1@ID4!1.02!58.90!ID4;;chr1:59249688..59249703,-!p3@JUN!1.02!58.30!JUN;;chr2:66662281..66662308,+!p1@MEIS1!1.01!32.31!MEIS1;;chr8:72756063..72756125,-!p1@MSC!1.01!18.93!MSC;;chr18:19749353..19749367,+!p4@GATA6!1.01!9.32!GATA6;;chr10:51572339..51572376,+!p4@NCOA4!0.99!20.13!NCOA4;;chr20:51588873..51588953,+!p1@TSHZ2!0.96!10.97!TSHZ2;;chr8:72756213..72756243,-!p5@MSC!0.95!10.37!MSC;;chr2:66662895..66662907,+!p3@MEIS1!0.95!9.92!MEIS1;;chr10:63809106..63809127,+!p1@ARID5B!0.93!104.88!ARID5B;;chr1:37940170..37940190,+!p1@ZC3H12A!0.93!96.16!ZC3H12A;;chr7:149470641..149470694,-!p1@ZNF467!0.91!33.66!ZNF467;;chr16:31076332..31076388,-!p3@ZNF668!0.91!7.06!ZNF668;;chr1:151032860..151032918,+!p1@MLLT11!0.89!84.75!MLLT11;;chr2:145275162..145275202,-!p2@ZEB2!0.89!41.47!ZEB2;;chr12:80085061..80085119,-!p6@PAWR!0.89!10.97!PAWR;;chr12:54447599..54447630,+!p3@HOXC4!0.89!8.41!HOXC4;;chr19:45908292..45908374,-!p1@PPP1R13L!0.88!61.46!PPP1R13L;;chr5:137804484..137804498,+!p2@EGR1!0.88!27.65!EGR1;;chr17:46682321..46682362,-!p1@HOXB6!0.88!6.61!HOXB6;;chr4:174451350..174451363,-!p3@HAND2!0.88!6.61!HAND2;;chr7:27170359..27170381,-!p1@HOXA4!0.87!6.46!HOXA4;;chr1:158979872..158979898,+!p3@IFI16!0.86!20.13!IFI16;;chr14:75745523..75745537,+!p1@FOS!0.85!784.04!FOS;;chr7:27153454..27153469,-!p2@HOXA3!0.85!6.01!HOXA3;;chr17:26697304..26697335,-!p1@SEBOX,p1@VTN!0.84!5.86!SEBOX;;chr7:1577899..1577943,+!p3@MAFK!0.83!5.71!MAFK;;chr3:5021268..5021282,+!p4@BHLHE40!0.81!11.72!BHLHE40;;chr8:106330696..106330719,+!p2@ZFPM2!0.81!7.06!ZFPM2;;chr7:27183191..27183214,-!p4@HOXA5!0.81!5.41!HOXA5;;chr7:27183263..27183284,-!p2@HOXA5!0.81!5.41!HOXA5;;chr2:66662249..66662267,+!p2@MEIS1!0.80!21.94!MEIS1;;chr12:26277956..26277980,-!p1@BHLHE41!0.79!19.83!BHLHE41;;chr20:2673383..2673441,+!p1@EBF4!0.79!8.56!EBF4;;chr21:36260343..36260402,-!p6@RUNX1!0.79!8.56!RUNX1;;chr9:96717629..96717644,-!p1@BARX1!0.79!5.11!BARX1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!0.79!5.11!HOXC5;;chr7:26191809..26191890,+!p1@NFE2L3!0.78!27.05!NFE2L3;;chr2:46612334..46612349,+!p6@EPAS1!0.78!6.76!EPAS1;;chr7:27169801..27169844,-!p2@HOXA4!0.78!4.96!HOXA4;;chr8:37963466..37963506,+!p3@ASH2L!0.76!6.16!ASH2L;;chr8:40755333..40755352,-!p1@ZMAT4!0.76!4.81!ZMAT4;;chr11:32457413..32457431,-!p2@WT1!0.76!4.81!WT1;;chr2:239756671..239756732,+!p1@TWIST2!0.75!16.08!TWIST2;;chr21:36421535..36421610,-!p2@RUNX1!0.74!17.43!RUNX1;;chr10:63809077..63809089,+!p5@ARID5B!0.74!10.37!ARID5B;;chr17:46622114..46622138,-!p4@HOXB2!0.73!7.06!HOXB2;;chr8:72756380..72756427,-!p8@MSC!0.73!4.36!MSC;;chr1:151032782..151032801,+!p4@MLLT11!0.72!9.02!MLLT11;;chr20:6748325..6748352,+!p1@BMP2!0.72!6.46!BMP2;;chr12:26277929..26277955,-!p3@BHLHE41!0.72!6.31!BHLHE41;;chr12:80085120..80085156,-!p14@PAWR!0.72!4.21!PAWR;;chr2:208030647..208030689,-!p1@KLF7!0.71!38.62!KLF7;;chr17:1958388..1958404,+!p1@HIC1!0.71!29.60!HIC1;;chr10:77161533..77161546,-!p2@ZNF503!0.70!17.88!ZNF503;;chr19:42636586..42636607,-!p1@POU2F2!0.70!12.17!POU2F2;;chr9:16870710..16870763,-!p1@BNC2!0.70!7.36!BNC2;;chr21:36260295..36260310,-!p3@RUNX1!0.70!6.91!RUNX1;;chr17:46132044..46132080,+!p4@NFE2L1!0.70!4.06!NFE2L1;;chr9:4300050..4300118,-!p1@GLIS3!0.69!29.15!GLIS3;;chr1:151032833..151032850,+!p3@MLLT11!0.68!9.47!MLLT11;;chr17:46655704..46655718,-!p2@HOXB4!0.68!6.01!HOXB4;;chr7:149470540..149470596,-!p2@ZNF467!0.68!5.26!ZNF467;;chr7:44143925..44143970,+!p1@AEBP1!0.67!94.81!AEBP1;;chr1:8938709..8938720,-!p3@ENO1!0.66!199.99!ENO1;;chr6:43140095..43140145,+!p5@SRF!0.66!4.66!SRF;;chr2:66662510..66662521,+!p6@MEIS1!0.66!3.61!MEIS1;;chr8:37963407..37963454,+!p2@ASH2L!0.65!11.57!ASH2L;;chr2:239756739..239756755,+!p2@TWIST2!0.65!6.46!TWIST2;;chr17:46688334..46688385,-!p1@HOXB7!0.65!5.26!HOXB7;;chr7:27183291..27183324,-!p1@HOXA5!0.65!3.46!HOXA5;;chr8:106330543..106330554,+!p4@ZFPM2!0.65!3.46!ZFPM2;;chr8:72756194..72756208,-!p9@MSC!0.65!3.46!MSC;;chr9:132427972..132428056,+!p1@PRRX2!0.64!4.66!PRRX2;;chr8:49833948..49833973,-!p2@SNAI2!0.63!24.64!SNAI2;;chr6:126240380..126240430,+!p2@NCOA7!0.63!9.62!NCOA7;;chr7:44143978..44143989,+!p2@AEBP1!0.63!6.61!AEBP1;;chr11:46299186..46299195,+!p3@CREB3L1!0.63!3.76!CREB3L1;;chr12:66218598..66218645,+!p2@HMGA2!0.62!17.28!HMGA2;;chr8:28243813..28243839,-!p4@ZNF395!0.62!6.31!ZNF395;;chr14:75746722..75746777,+!p2@FOS!0.62!4.21!FOS;;chr8:72755987..72756002,-!p7@MSC!0.62!3.16!MSC;;chr12:54447637..54447659,+!p4@HOXC4!0.62!3.16!HOXC4;;chr2:101436564..101436647,+!p1@NPAS2!0.60!73.48!NPAS2;;chr5:92918919..92918942,+!p1@NR2F1!0.60!15.93!NR2F1;;chr17:46621937..46621966,-!p2@HOXB2!0.60!9.32!HOXB2;;chr10:22292591..22292606,-!p2@DNAJC1!0.60!5.26!DNAJC1;;chr7:27170274..27170308,-!p3@HOXA4!0.60!3.01!HOXA4;;chr3:25470156..25470227,+!p2@RARB!0.60!3.01!RARB;;chr17:3571863..3571881,-!p1@TAX1BP3!0.59!254.69!TAX1BP3;;chr15:83953373..83953386,-!p2@BNC1!0.59!2.85!BNC1;;chr2:66662396..66662407,+!p4@MEIS1!0.59!2.85!MEIS1;;chr19:54058073..54058088,+!p1@ZNF331!0.59!2.85!ZNF331;;chr16:88519669..88519726,+!p1@ZFPM1!0.58!30.95!ZFPM1;;chr11:707063..707088,-!p4@DEAF1!0.58!3.76!DEAF1;;chr8:49833978..49833996,-!p1@SNAI2!0.57!70.17!SNAI2;;chr7:17338266..17338282,+!p1@AHR!0.57!36.66!AHR;;chr3:114343768..114343822,-!p1@ZBTB20!0.57!14.42!ZBTB20;;chr11:46299443..46299459,+!p4@CREB3L1!0.57!2.70!CREB3L1;;chr18:45663490..45663528,-!p2@ZBTB7C!0.57!2.70!ZBTB7C;;chr7:63505799..63505904,+!p1@ZNF727!0.57!2.70!ZNF727;;chr10:63809134..63809145,+!p6@ARID5B!0.56!7.06!ARID5B;;chr9:4300016..4300039,-!p2@GLIS3!0.56!5.11!GLIS3;;chr1:151032739..151032748,+!p6@MLLT11!0.56!3.46!MLLT11;;chr8:28243785..28243799,-!p6@ZNF395!0.56!3.31!ZNF395;;chr20:48807351..48807384,+!p1@CEBPB!0.55!334.47!CEBPB;;chr1:59249707..59249727,-!p1@JUN!0.55!136.58!JUN;;chr2:19558373..19558392,-!p1@OSR1!0.55!8.26!OSR1;;chr9:102584159..102584174,+!p2@NR4A3!0.55!5.26!NR4A3;;chr9:4299979..4299996,-!p3@GLIS3!0.55!4.66!GLIS3;;chr17:46687959..46688007,-!p2@HOXB7!0.55!3.76!HOXB7;;chr17:46691732..46691766,-!p4@HOXB8!0.55!2.55!HOXB8;;chr2:176994408..176994492,+!p1@HOXD8!0.55!2.55!HOXD8;;chr3:25469815..25469866,+!p3@RARB!0.55!2.55!RARB;;chr19:16435625..16435682,+!p1@KLF2!0.54!102.78!KLF2;;chr10:77161504..77161530,-!p1@ZNF503!0.54!41.77!ZNF503;;chr11:65687158..65687216,+!p4@DRAP1!0.54!17.43!DRAP1;;chr11:65686732..65686756,+!p2@DRAP1!0.54!12.77!DRAP1;;chr5:92918894..92918912,+!p2@NR2F1!0.54!9.77!NR2F1;;chr18:19749517..19749531,+!p3@GATA6!0.54!4.96!GATA6;;chr19:20011775..20011800,+!p2@ZNF93!0.54!4.96!ZNF93;;chr12:80085255..80085284,-!p9@PAWR!0.54!3.91!PAWR;;chr2:8822176..8822196,+!p1@ID2!0.53!439.80!ID2;;chr7:27142290..27142310,-!p1@HOXA2!0.53!2.40!HOXA2;;chr1:8934931..8934947,-!p4@ENO1!0.52!9.47!ENO1;;chr8:116681123..116681143,-!p4@TRPS1!0.52!5.26!TRPS1;;chr19:50431973..50431998,+!p5@ATF5!0.52!3.16!ATF5;;chr11:120107344..120107351,+!p1@POU2F3!0.52!3.01!POU2F3;;chr3:5021113..5021180,+!p1@BHLHE40!0.51!207.51!BHLHE40;;chr3:101568349..101568365,+!p1@NFKBIZ!0.51!155.37!NFKBIZ;;chr17:46655730..46655791,-!p1@HOXB4!0.51!6.76!HOXB4;;chr8:116681108..116681120,-!p9@TRPS1!0.51!3.01!TRPS1;;chr5:92918956..92918969,+!p4@NR2F1!0.51!2.55!NR2F1;;chr7:27170042..27170064,-!p4@HOXA4!0.51!2.25!HOXA4;;chr16:86612320..86612394,+!p1@FOXL1!0.51!2.25!FOXL1;;chr15:37392724..37392757,-!p1@MEIS2!0.50!12.62!MEIS2;;chr7:150945754..150945789,-!p2@SMARCD3!0.50!8.26!SMARCD3;;chr1:200379104..200379128,-!p2@ZNF281!0.50!6.46!ZNF281;;chr1:151032922..151032951,+!p2@MLLT11!0.50!4.06!MLLT11;;chr12:80084279..80084293,-!p8@PAWR!0.50!4.06!PAWR;;chr10:77161650..77161661,-!p4@ZNF503!0.50!3.31!ZNF503;;chr5:137801160..137801176,+!p1@EGR1!0.49!283.24!EGR1;;chr2:238536207..238536290,+!p2@LRRFIP1!0.49!27.20!LRRFIP1;;chr9:102584262..102584276,+!p1@NR4A3!0.49!5.56!NR4A3;;chr17:20492136..20492165,+!p1@MEIS3P2!0.49!3.76!MEIS3P2;;chr6:126240442..126240459,+!p4@NCOA7!0.49!2.85!NCOA7;;chr6:45296048..45296082,+!p1@RUNX2!0.49!2.55!RUNX2;;chr16:88519743..88519754,+!p2@ZFPM1!0.49!2.40!ZFPM1;;chr7:28449015..28449024,+!p6@CREB5!0.49!2.10!CREB5;;chr8:93115584..93115642,-!p5@RUNX1T1!0.49!2.10!RUNX1T1;;chr21:36421347..36421380,-!p8@RUNX1!0.49!2.10!RUNX1;;chr11:65687362..65687436,+!p3@DRAP1!0.48!12.02!DRAP1;;chr12:66218255..66218304,+!p3@HMGA2!0.48!6.76!HMGA2;;chr3:5021191..5021202,+!p3@BHLHE40!0.48!6.76!BHLHE40;;chr12:48298765..48298783,-!p2@VDR!0.48!5.11!VDR;;chr6:43140149..43140177,+!p8@SRF!0.48!2.25!SRF;;chr10:22292613..22292674,-!p1@DNAJC1!0.47!79.19!DNAJC1;;chrX:128657457..128657475,-!p1@SMARCA1!0.47!30.80!SMARCA1;;chr7:17338239..17338262,+!p2@AHR!0.47!19.53!AHR;;chr21:36259445..36259519,-!p4@RUNX1!0.47!6.91!RUNX1;;chr5:139487608..139487663,+!p3@PURA!0.47!5.11!PURA;;chr3:25469724..25469773,+!p1@RARB!0.47!3.16!RARB;;chr2:113994526..113994556,-!p3@PAX8!0.47!1.95!PAX8;;chr5:121465234..121465263,+!p1@ZNF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+|ffid_belonging_in_development=CL:0000134
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 35: / Line 41: @@
 |fonse_treatment_closure=
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520metastasis%252c%2520donor3.CNhs12378.11762-123H7.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520metastasis%252c%2520donor3.CNhs12378.11762-123H7.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520metastasis%252c%2520donor3.CNhs12378.11762-123H7.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520metastasis%252c%2520donor3.CNhs12378.11762-123H7.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520metastasis%252c%2520donor3.CNhs12378.11762-123H7.hg38.nobarcode.ctss.bed.gz
 |id=FF:11762-123H7
-|is_a=EFO:0002091;;FF:0000002;;FF:0000210;;FF:0000274
+|is_a=EFO:0002091;;FF:0000274
+|is_obsolete=
+|library_id=CNhs12378
+|library_id_phase_based=2:CNhs12378
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11762
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11762
 |name=mesenchymal precursor cell - ovarian cancer metastasis, donor3
 |namespace=FANTOM5
@@ Line 42: / Line 60: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs12378,LSID914,release011,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
+|refex=http://refex.dbcls.jp/genelist.php?lang
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 |rna_box=123
 |rna_catalog_number=
@@ Line 57: / Line 78: @@
 |rna_weight_ug=51.22095
 |sample_age=
+|sample_category=primary cells
 |sample_cell_catalog=
 |sample_cell_line=
@@ Line 69: / Line 91: @@
 |sample_ethnicity=
 |sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.64022870801134e-205!GO:0005737;cytoplasm;7.65170667382271e-197!GO:0043226;organelle;6.34243049059078e-154!GO:0043229;intracellular organelle;1.70211593132341e-153!GO:0043231;intracellular membrane-bound organelle;2.23516800913246e-153!GO:0043227;membrane-bound organelle;4.5099693506845e-153!GO:0044444;cytoplasmic part;9.30952535222176e-145!GO:0044422;organelle part;2.20726749713794e-115!GO:0044446;intracellular organelle part;5.80247005363577e-114!GO:0005515;protein binding;1.39280505227193e-75!GO:0032991;macromolecular complex;1.62176346807929e-75!GO:0044238;primary metabolic process;1.93770256702986e-69!GO:0044237;cellular metabolic process;8.2712532764379e-68!GO:0030529;ribonucleoprotein complex;7.95005339569732e-67!GO:0043170;macromolecule metabolic process;1.85208576864956e-63!GO:0005739;mitochondrion;1.48317317379239e-55!GO:0031090;organelle membrane;1.8918785379222e-55!GO:0043233;organelle lumen;1.8918785379222e-55!GO:0031974;membrane-enclosed lumen;1.8918785379222e-55!GO:0019538;protein metabolic process;5.55564980245425e-51!GO:0003723;RNA binding;6.32792903411926e-50!GO:0044428;nuclear part;7.2334389127616e-50!GO:0033036;macromolecule localization;1.70639583641326e-46!GO:0015031;protein transport;2.5433714915869e-46!GO:0044260;cellular macromolecule metabolic process;2.9981455758443e-45!GO:0045184;establishment of protein localization;1.7996740916353e-44!GO:0044267;cellular protein metabolic process;3.51903046091282e-44!GO:0008104;protein localization;6.11894035092034e-44!GO:0005840;ribosome;3.06610093360844e-42!GO:0005634;nucleus;6.0140628645286e-42!GO:0016043;cellular component organization and biogenesis;6.57032145290646e-42!GO:0006412;translation;1.05324017762021e-40!GO:0044429;mitochondrial part;2.96634678350097e-39!GO:0005829;cytosol;3.15092821051623e-39!GO:0009058;biosynthetic process;6.87034149495519e-39!GO:0043234;protein complex;5.79095407993273e-38!GO:0003735;structural constituent of ribosome;1.28490740519727e-37!GO:0009059;macromolecule biosynthetic process;3.66595208861565e-36!GO:0031967;organelle envelope;3.66621130110236e-36!GO:0031975;envelope;9.01507494679319e-36!GO:0046907;intracellular transport;2.67857516713731e-35!GO:0006396;RNA processing;1.10601416854685e-33!GO:0033279;ribosomal subunit;3.30978694446701e-33!GO:0044249;cellular biosynthetic process;1.60630682009106e-31!GO:0031981;nuclear lumen;9.54125309913839e-30!GO:0043283;biopolymer metabolic process;4.61051211904084e-29!GO:0006886;intracellular protein transport;5.69647326080156e-29!GO:0016071;mRNA metabolic process;1.01020824683807e-28!GO:0008380;RNA splicing;9.96350222772628e-28!GO:0005783;endoplasmic reticulum;1.04372614097178e-27!GO:0005740;mitochondrial envelope;3.80778405741096e-27!GO:0031966;mitochondrial membrane;1.09907644031505e-25!GO:0006397;mRNA processing;3.70016534988988e-25!GO:0012505;endomembrane system;4.66849262351911e-25!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.02250893448245e-24!GO:0010467;gene expression;1.32709507661677e-24!GO:0065003;macromolecular complex assembly;4.45719943672764e-24!GO:0019866;organelle inner membrane;6.47339371363986e-24!GO:0051649;establishment of cellular localization;1.44304101539057e-23!GO:0051641;cellular localization;2.35818975977873e-23!GO:0005743;mitochondrial inner membrane;1.28940516791709e-22!GO:0006119;oxidative phosphorylation;1.30582229209394e-22!GO:0005794;Golgi apparatus;3.2789056711594e-22!GO:0022607;cellular component assembly;2.67622051035646e-21!GO:0044445;cytosolic part;6.34888180773029e-21!GO:0006996;organelle organization and biogenesis;7.16784949135872e-21!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.3272755381119e-20!GO:0006457;protein folding;3.93512898048544e-20!GO:0044455;mitochondrial membrane part;1.13629428693458e-19!GO:0044432;endoplasmic reticulum part;3.37738409911278e-19!GO:0048770;pigment granule;3.48218137356517e-19!GO:0042470;melanosome;3.48218137356517e-19!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.4872279275725e-19!GO:0005681;spliceosome;7.78443019474365e-19!GO:0043228;non-membrane-bound organelle;1.07928167974319e-18!GO:0043232;intracellular non-membrane-bound organelle;1.07928167974319e-18!GO:0005654;nucleoplasm;4.56232454712006e-18!GO:0015934;large ribosomal subunit;1.62421229192791e-17!GO:0016462;pyrophosphatase activity;2.28207467157997e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.98759657111741e-17!GO:0016817;hydrolase activity, acting on acid anhydrides;4.52135603560647e-17!GO:0015935;small ribosomal subunit;1.26522060303045e-16!GO:0005746;mitochondrial respiratory chain;1.47760600350174e-16!GO:0016192;vesicle-mediated transport;2.0384426034289e-16!GO:0008134;transcription factor binding;3.87571914630506e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.13390370105548e-16!GO:0017111;nucleoside-triphosphatase activity;4.48694617917312e-16!GO:0048193;Golgi vesicle transport;4.48694617917312e-16!GO:0000166;nucleotide binding;5.75154125609004e-16!GO:0000502;proteasome complex (sensu Eukaryota);1.52796552228451e-15!GO:0043285;biopolymer catabolic process;1.60305240950399e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;3.38382266258434e-15!GO:0030163;protein catabolic process;4.70701956877745e-15!GO:0044265;cellular macromolecule catabolic process;4.72544337032722e-15!GO:0044451;nucleoplasm part;4.8911363426371e-15!GO:0050136;NADH dehydrogenase (quinone) activity;5.79540373798766e-15!GO:0003954;NADH dehydrogenase activity;5.79540373798766e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;5.79540373798766e-15!GO:0019941;modification-dependent protein catabolic process;6.39225794309955e-15!GO:0043632;modification-dependent macromolecule catabolic process;6.39225794309955e-15!GO:0044257;cellular protein catabolic process;6.59868526814e-15!GO:0009057;macromolecule catabolic process;8.34211163534773e-15!GO:0031980;mitochondrial lumen;8.60176397953298e-15!GO:0005759;mitochondrial matrix;8.60176397953298e-15!GO:0006511;ubiquitin-dependent protein catabolic process;8.94568118325441e-15!GO:0022618;protein-RNA complex assembly;3.21797053652413e-14!GO:0051186;cofactor metabolic process;3.53913166550222e-14!GO:0051082;unfolded protein binding;5.77627684918875e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;6.82149953282306e-14!GO:0006512;ubiquitin cycle;1.13050994639732e-13!GO:0016874;ligase activity;1.42773685275785e-13!GO:0044248;cellular catabolic process;1.52143458287898e-13!GO:0006605;protein targeting;1.62224506856722e-13!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.74421221025748e-13!GO:0012501;programmed cell death;2.44913469506008e-13!GO:0030964;NADH dehydrogenase complex (quinone);3.15960451039181e-13!GO:0045271;respiratory chain complex I;3.15960451039181e-13!GO:0005747;mitochondrial respiratory chain complex I;3.15960451039181e-13!GO:0042775;organelle ATP synthesis coupled electron transport;3.36554468381625e-13!GO:0042773;ATP synthesis coupled electron transport;3.36554468381625e-13!GO:0005789;endoplasmic reticulum membrane;6.69271291049464e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);7.1155826002048e-13!GO:0043412;biopolymer modification;8.06120776870402e-13!GO:0006915;apoptosis;8.11202848960831e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;9.76852917466777e-13!GO:0005793;ER-Golgi intermediate compartment;1.37622033075637e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.1056440218416e-12!GO:0005730;nucleolus;3.80067949464905e-12!GO:0008219;cell death;4.00040763339214e-12!GO:0016265;death;4.00040763339214e-12!GO:0006464;protein modification process;4.04221621692844e-12!GO:0032553;ribonucleotide binding;6.60414472409575e-12!GO:0032555;purine ribonucleotide binding;6.60414472409575e-12!GO:0005761;mitochondrial ribosome;8.1172966018127e-12!GO:0000313;organellar ribosome;8.1172966018127e-12!GO:0008135;translation factor activity, nucleic acid binding;9.97886011359176e-12!GO:0005768;endosome;1.16075639291838e-11!GO:0017076;purine nucleotide binding;1.24281488130845e-11!GO:0006259;DNA metabolic process;1.75774023239732e-11!GO:0009055;electron carrier activity;2.88614411723254e-11!GO:0048523;negative regulation of cellular process;3.07302914528306e-11!GO:0006732;coenzyme metabolic process;4.63746258255011e-11!GO:0007049;cell cycle;2.44298044275897e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;2.8014004038476e-10!GO:0000375;RNA splicing, via transesterification reactions;2.8014004038476e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.8014004038476e-10!GO:0044431;Golgi apparatus part;3.96539367334097e-10!GO:0003924;GTPase activity;7.03635204011088e-10!GO:0005635;nuclear envelope;7.07114641631309e-10!GO:0003712;transcription cofactor activity;8.10194764572044e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;9.08778527596899e-10!GO:0008565;protein transporter activity;9.95341840425314e-10!GO:0009150;purine ribonucleotide metabolic process;1.01269302188824e-09!GO:0009259;ribonucleotide metabolic process;1.18612700571371e-09!GO:0006163;purine nucleotide metabolic process;1.19957673520217e-09!GO:0048519;negative regulation of biological process;1.53511091893929e-09!GO:0043069;negative regulation of programmed cell death;3.74624936766005e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.8205513754948e-09!GO:0016023;cytoplasmic membrane-bound vesicle;4.04992446939493e-09!GO:0009152;purine ribonucleotide biosynthetic process;4.19318596079285e-09!GO:0043067;regulation of programmed cell death;4.30561216097189e-09!GO:0031988;membrane-bound vesicle;4.45058995171454e-09!GO:0003743;translation initiation factor activity;4.60072293304173e-09!GO:0043687;post-translational protein modification;4.80417028380347e-09!GO:0030120;vesicle coat;4.87771414786793e-09!GO:0030662;coated vesicle membrane;4.87771414786793e-09!GO:0006164;purine nucleotide biosynthetic process;5.16098324918825e-09!GO:0048475;coated membrane;5.84308032195108e-09!GO:0030117;membrane coat;5.84308032195108e-09!GO:0006413;translational initiation;6.59988942419844e-09!GO:0042981;regulation of apoptosis;7.2179812364775e-09!GO:0009056;catabolic process;7.80075185311379e-09!GO:0005788;endoplasmic reticulum lumen;8.09539532945957e-09!GO:0006888;ER to Golgi vesicle-mediated transport;8.09539532945957e-09!GO:0003676;nucleic acid binding;8.11509961790223e-09!GO:0015986;ATP synthesis coupled proton transport;9.9572987144673e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;9.9572987144673e-09!GO:0031965;nuclear membrane;1.00557105260737e-08!GO:0043066;negative regulation of apoptosis;1.07932476313608e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.08142043223214e-08!GO:0006913;nucleocytoplasmic transport;1.10832459940473e-08!GO:0009199;ribonucleoside triphosphate metabolic process;1.30883818269718e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.38604195290042e-08!GO:0009144;purine nucleoside triphosphate metabolic process;1.38604195290042e-08!GO:0006461;protein complex assembly;1.40050143236866e-08!GO:0008639;small protein conjugating enzyme activity;1.61802715130662e-08!GO:0009260;ribonucleotide biosynthetic process;1.61802715130662e-08!GO:0009060;aerobic respiration;1.83353992628882e-08!GO:0009141;nucleoside triphosphate metabolic process;1.8370851763102e-08!GO:0006446;regulation of translational initiation;1.95211054093309e-08!GO:0016491;oxidoreductase activity;1.98332617588248e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.24475551664497e-08!GO:0051169;nuclear transport;2.26478432493081e-08!GO:0009142;nucleoside triphosphate biosynthetic process;2.62926348830409e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.62926348830409e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.71823911491877e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.71823911491877e-08!GO:0005524;ATP binding;2.81197117691915e-08!GO:0016070;RNA metabolic process;2.81813930252692e-08!GO:0004842;ubiquitin-protein ligase activity;3.60560656812155e-08!GO:0000139;Golgi membrane;3.96643047048221e-08!GO:0019787;small conjugating protein ligase activity;3.99586360729105e-08!GO:0032559;adenyl ribonucleotide binding;4.44323344782098e-08!GO:0016604;nuclear body;5.10975059007915e-08!GO:0044440;endosomal part;6.22536625803408e-08!GO:0010008;endosome membrane;6.22536625803408e-08!GO:0005773;vacuole;6.4550276090515e-08!GO:0031982;vesicle;6.72513954057533e-08!GO:0030554;adenyl nucleotide binding;9.50037232499412e-08!GO:0031410;cytoplasmic vesicle;9.69629476062571e-08!GO:0019829;cation-transporting ATPase activity;9.97620303375754e-08!GO:0045333;cellular respiration;1.16960351578148e-07!GO:0046034;ATP metabolic process;1.26358946171378e-07!GO:0006916;anti-apoptosis;1.32872655673373e-07!GO:0017038;protein import;1.43017408039204e-07!GO:0022402;cell cycle process;1.43017408039204e-07!GO:0016881;acid-amino acid ligase activity;1.51703985267557e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.59490681248604e-07!GO:0042254;ribosome biogenesis and assembly;1.95807453013838e-07!GO:0006754;ATP biosynthetic process;2.09251096487877e-07!GO:0006753;nucleoside phosphate metabolic process;2.09251096487877e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.30919195638942e-07!GO:0044453;nuclear membrane part;2.36402329458153e-07!GO:0005770;late endosome;2.85411355244611e-07!GO:0006099;tricarboxylic acid cycle;3.30450349314267e-07!GO:0046356;acetyl-CoA catabolic process;3.30450349314267e-07!GO:0000074;regulation of progression through cell cycle;3.38648373781832e-07!GO:0003714;transcription corepressor activity;4.45644121150842e-07!GO:0051726;regulation of cell cycle;4.45644121150842e-07!GO:0051188;cofactor biosynthetic process;5.07139863788601e-07!GO:0051246;regulation of protein metabolic process;5.2039578519445e-07!GO:0005525;GTP binding;5.72426526115222e-07!GO:0005839;proteasome core complex (sensu Eukaryota);6.35579077388162e-07!GO:0051187;cofactor catabolic process;8.25098023371659e-07!GO:0031252;leading edge;1.12676996910118e-06!GO:0016787;hydrolase activity;1.19643601961112e-06!GO:0000323;lytic vacuole;1.20218610246258e-06!GO:0005764;lysosome;1.20218610246258e-06!GO:0050794;regulation of cellular process;1.3978308254082e-06!GO:0007005;mitochondrion organization and biogenesis;1.51666683391981e-06!GO:0006366;transcription from RNA polymerase II promoter;1.59110937818719e-06!GO:0008654;phospholipid biosynthetic process;1.60268137357782e-06!GO:0045786;negative regulation of progression through cell cycle;1.68024809040508e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.70761336387429e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.79543733614105e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.81742502902753e-06!GO:0005798;Golgi-associated vesicle;1.83127825513273e-06!GO:0016607;nuclear speck;1.83127825513273e-06!GO:0030532;small nuclear ribonucleoprotein complex;1.83144859513355e-06!GO:0016564;transcription repressor activity;1.97094815986847e-06!GO:0006084;acetyl-CoA metabolic process;2.16559917633976e-06!GO:0016853;isomerase activity;2.35282661593065e-06!GO:0006974;response to DNA damage stimulus;2.49614515707247e-06!GO:0042623;ATPase activity, coupled;2.55696280727171e-06!GO:0051789;response to protein stimulus;2.55696280727171e-06!GO:0006986;response to unfolded protein;2.55696280727171e-06!GO:0009109;coenzyme catabolic process;2.56544665700499e-06!GO:0006399;tRNA metabolic process;2.59872795874404e-06!GO:0006793;phosphorus metabolic process;2.70714698034891e-06!GO:0006796;phosphate metabolic process;2.70714698034891e-06!GO:0016887;ATPase activity;3.16588202644543e-06!GO:0005769;early endosome;3.73910310815419e-06!GO:0004298;threonine endopeptidase activity;4.48783938805418e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;4.98287028339638e-06!GO:0004812;aminoacyl-tRNA ligase activity;4.98287028339638e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;4.98287028339638e-06!GO:0043038;amino acid activation;6.01186457331133e-06!GO:0006418;tRNA aminoacylation for protein translation;6.01186457331133e-06!GO:0043039;tRNA aminoacylation;6.01186457331133e-06!GO:0045259;proton-transporting ATP synthase complex;6.37499167160339e-06!GO:0032561;guanyl ribonucleotide binding;6.77737850835108e-06!GO:0019001;guanyl nucleotide binding;6.77737850835108e-06!GO:0016740;transferase activity;6.81166951646261e-06!GO:0030133;transport vesicle;7.79438443264956e-06!GO:0006091;generation of precursor metabolites and energy;9.64834709178195e-06!GO:0006613;cotranslational protein targeting to membrane;1.1005404238973e-05!GO:0051170;nuclear import;1.54227833746001e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;1.55277103720713e-05!GO:0005905;coated pit;1.70576277819041e-05!GO:0008026;ATP-dependent helicase activity;1.70642222183312e-05!GO:0009117;nucleotide metabolic process;1.88267806272721e-05!GO:0009108;coenzyme biosynthetic process;1.92092089291518e-05!GO:0016310;phosphorylation;2.01885504901433e-05!GO:0004386;helicase activity;2.05042104255104e-05!GO:0006752;group transfer coenzyme metabolic process;2.13330393464687e-05!GO:0016859;cis-trans isomerase activity;2.21934134616546e-05!GO:0006606;protein import into nucleus;2.34540477640139e-05!GO:0065002;intracellular protein transport across a membrane;2.39282657986992e-05!GO:0030867;rough endoplasmic reticulum membrane;2.62756305578557e-05!GO:0006325;establishment and/or maintenance of chromatin architecture;2.62756305578557e-05!GO:0048522;positive regulation of cellular process;2.78893637606579e-05!GO:0005643;nuclear pore;3.07965209336572e-05!GO:0007243;protein kinase cascade;3.0897368119321e-05!GO:0015980;energy derivation by oxidation of organic compounds;3.10437913466097e-05!GO:0033116;ER-Golgi intermediate compartment membrane;3.24619478772789e-05!GO:0031968;organelle outer membrane;3.41949059153115e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.96902759950358e-05!GO:0000245;spliceosome assembly;4.08197593144058e-05!GO:0008361;regulation of cell size;4.08197593144058e-05!GO:0045454;cell redox homeostasis;4.60230930251241e-05!GO:0006281;DNA repair;4.85522787850593e-05!GO:0019867;outer membrane;5.54812025545799e-05!GO:0031324;negative regulation of cellular metabolic process;5.64515289297635e-05!GO:0032446;protein modification by small protein conjugation;6.00463318276693e-05!GO:0006323;DNA packaging;6.2430224248401e-05!GO:0000278;mitotic cell cycle;6.2430224248401e-05!GO:0016049;cell growth;6.95298099194188e-05!GO:0044262;cellular carbohydrate metabolic process;7.60307340672052e-05!GO:0051427;hormone receptor binding;8.00447342341161e-05!GO:0016567;protein ubiquitination;8.08048118443307e-05!GO:0015630;microtubule cytoskeleton;8.70097903029319e-05!GO:0005791;rough endoplasmic reticulum;8.71688159262044e-05!GO:0005762;mitochondrial large ribosomal subunit;8.71688159262044e-05!GO:0000315;organellar large ribosomal subunit;8.71688159262044e-05!GO:0005667;transcription factor complex;9.13120489091756e-05!GO:0006612;protein targeting to membrane;9.28509640260579e-05!GO:0043623;cellular protein complex assembly;0.00010287490851912!GO:0030036;actin cytoskeleton organization and biogenesis;0.000103379817431253!GO:0050789;regulation of biological process;0.000108047660643084!GO:0000151;ubiquitin ligase complex;0.000115334874337888!GO:0007264;small GTPase mediated signal transduction;0.000116151908707659!GO:0016563;transcription activator activity;0.000116682691796372!GO:0016126;sterol biosynthetic process;0.0001231424250859!GO:0016044;membrane organization and biogenesis;0.000125651749160235!GO:0003697;single-stranded DNA binding;0.000133461462092601!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000135462112235071!GO:0051276;chromosome organization and biogenesis;0.000144665375526119!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000150412884071529!GO:0030659;cytoplasmic vesicle membrane;0.0001567592395084!GO:0035257;nuclear hormone receptor binding;0.0001567592395084!GO:0046930;pore complex;0.000162610155280879!GO:0006364;rRNA processing;0.000164827133333983!GO:0006403;RNA localization;0.000176093246481233!GO:0050657;nucleic acid transport;0.000204705612516383!GO:0051236;establishment of RNA localization;0.000204705612516383!GO:0050658;RNA transport;0.000204705612516383!GO:0005741;mitochondrial outer membrane;0.000205598244215028!GO:0008610;lipid biosynthetic process;0.0002363844898109!GO:0008250;oligosaccharyl transferase complex;0.000255273836749943!GO:0016072;rRNA metabolic process;0.000256717790235671!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.000257456519570447!GO:0046474;glycerophospholipid biosynthetic process;0.000262769904216019!GO:0001558;regulation of cell growth;0.00027440133054295!GO:0043566;structure-specific DNA binding;0.000306091799261441!GO:0043021;ribonucleoprotein binding;0.000325452979198212!GO:0004576;oligosaccharyl transferase activity;0.000326519741304913!GO:0005885;Arp2/3 protein complex;0.000327708386348485!GO:0005813;centrosome;0.00033096961983363!GO:0065004;protein-DNA complex assembly;0.000335447018266516!GO:0009892;negative regulation of metabolic process;0.000336903991219931!GO:0005048;signal sequence binding;0.000339140711810099!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000363019063651714!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000371536240951739!GO:0030118;clathrin coat;0.000371635472833386!GO:0044433;cytoplasmic vesicle part;0.000378841666265264!GO:0046467;membrane lipid biosynthetic process;0.000380849314897394!GO:0030663;COPI coated vesicle membrane;0.000382428711504559!GO:0030126;COPI vesicle coat;0.000382428711504559!GO:0016568;chromatin modification;0.000385267181728258!GO:0003713;transcription coactivator activity;0.000389810016584349!GO:0009719;response to endogenous stimulus;0.000416186130154091!GO:0003724;RNA helicase activity;0.000431620989902726!GO:0018196;peptidyl-asparagine modification;0.000528990220184804!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000528990220184804!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000539136192687712!GO:0007050;cell cycle arrest;0.000650817018893995!GO:0030658;transport vesicle membrane;0.000663277674162541!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000692608662167995!GO:0030029;actin filament-based process;0.000700252630457331!GO:0016779;nucleotidyltransferase activity;0.000850707584599028!GO:0051920;peroxiredoxin activity;0.000871808280921328!GO:0005815;microtubule organizing center;0.000892136298498363!GO:0030137;COPI-coated vesicle;0.000933887438107675!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000938906438491583!GO:0046489;phosphoinositide biosynthetic process;0.000946142625625346!GO:0031901;early endosome membrane;0.000963576885454218!GO:0012506;vesicle membrane;0.000964907872496586!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00102531387075494!GO:0030176;integral to endoplasmic reticulum membrane;0.00103760786181906!GO:0048518;positive regulation of biological process;0.00109671269181822!GO:0019843;rRNA binding;0.0011078929006864!GO:0031418;L-ascorbic acid binding;0.00117882188446529!GO:0000314;organellar small ribosomal subunit;0.00118774302902994!GO:0005763;mitochondrial small ribosomal subunit;0.00118774302902994!GO:0006333;chromatin assembly or disassembly;0.0011958847076163!GO:0006891;intra-Golgi vesicle-mediated transport;0.00120885626107468!GO:0030119;AP-type membrane coat adaptor complex;0.00125086355540006!GO:0016197;endosome transport;0.00135911241809409!GO:0006695;cholesterol biosynthetic process;0.00142009069827536!GO:0048471;perinuclear region of cytoplasm;0.00144807390447477!GO:0005694;chromosome;0.00151053286879228!GO:0048468;cell development;0.00151053286879228!GO:0006979;response to oxidative stress;0.00152225656423188!GO:0030027;lamellipodium;0.00154554245346651!GO:0008092;cytoskeletal protein binding;0.00159323645221451!GO:0045045;secretory pathway;0.00160758779844466!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00163090358388151!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0017006212141934!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0017006212141934!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0017006212141934!GO:0007010;cytoskeleton organization and biogenesis;0.00184355914390626!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00189031124174412!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00189031124174412!GO:0001726;ruffle;0.0019741063951774!GO:0006509;membrane protein ectodomain proteolysis;0.00203706495761244!GO:0033619;membrane protein proteolysis;0.00203706495761244!GO:0016481;negative regulation of transcription;0.00205492479993194!GO:0019899;enzyme binding;0.00219353586610256!GO:0051028;mRNA transport;0.00235950346581631!GO:0030660;Golgi-associated vesicle membrane;0.00236141969990444!GO:0006839;mitochondrial transport;0.00246301852641837!GO:0030131;clathrin adaptor complex;0.00247924931517974!GO:0043284;biopolymer biosynthetic process;0.00247924931517974!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00251999798170336!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00264767232795654!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00275917817241267!GO:0030132;clathrin coat of coated pit;0.00280114554891805!GO:0006650;glycerophospholipid metabolic process;0.00283389404158526!GO:0048500;signal recognition particle;0.0028387983959149!GO:0030134;ER to Golgi transport vesicle;0.0030483288666037!GO:0042802;identical protein binding;0.0030483288666037!GO:0043681;protein import into mitochondrion;0.00314875499272825!GO:0007040;lysosome organization and biogenesis;0.00320814194028569!GO:0015631;tubulin binding;0.0032296990552882!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00341879792862203!GO:0032940;secretion by cell;0.00346580756580458!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00349929201667273!GO:0005586;collagen type III;0.00350478307482172!GO:0051301;cell division;0.00359141539149883!GO:0006892;post-Golgi vesicle-mediated transport;0.00362927852280434!GO:0003729;mRNA binding;0.00372003993824722!GO:0035258;steroid hormone receptor binding;0.00374719054758109!GO:0016860;intramolecular oxidoreductase activity;0.00374719054758109!GO:0009967;positive regulation of signal transduction;0.00375868950912996!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00376699305484875!GO:0048487;beta-tubulin binding;0.00379058588902853!GO:0031902;late endosome membrane;0.00383648175141567!GO:0006260;DNA replication;0.00395348913857185!GO:0008186;RNA-dependent ATPase activity;0.00403440572785585!GO:0000785;chromatin;0.00404410637346166!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00417282322493724!GO:0015399;primary active transmembrane transporter activity;0.00417282322493724!GO:0031543;peptidyl-proline dioxygenase activity;0.00421648668817882!GO:0030125;clathrin vesicle coat;0.00423240041344462!GO:0030665;clathrin coated vesicle membrane;0.00423240041344462!GO:0017166;vinculin binding;0.00445757806708371!GO:0030384;phosphoinositide metabolic process;0.00463960314527649!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00486274074119522!GO:0044427;chromosomal part;0.00493020061261145!GO:0005869;dynactin complex;0.00524455965684331!GO:0030127;COPII vesicle coat;0.00527182737259286!GO:0012507;ER to Golgi transport vesicle membrane;0.00527182737259286!GO:0007033;vacuole organization and biogenesis;0.00528633862188459!GO:0003899;DNA-directed RNA polymerase activity;0.00529104802310071!GO:0006414;translational elongation;0.00537523497690229!GO:0031072;heat shock protein binding;0.00537523497690229!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00541928743987963!GO:0046519;sphingoid metabolic process;0.00544732342589902!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00548045192543908!GO:0045047;protein targeting to ER;0.00548045192543908!GO:0051329;interphase of mitotic cell cycle;0.00554930588267151!GO:0009165;nucleotide biosynthetic process;0.00557867225875341!GO:0006672;ceramide metabolic process;0.00602501410322488!GO:0006497;protein amino acid lipidation;0.00614797445783741!GO:0016363;nuclear matrix;0.00632141863406972!GO:0065009;regulation of a molecular function;0.00691018539710097!GO:0007006;mitochondrial membrane organization and biogenesis;0.00701304747962756!GO:0007034;vacuolar transport;0.00708432951740254!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00710537265845763!GO:0019798;procollagen-proline dioxygenase activity;0.00724140759166185!GO:0006626;protein targeting to mitochondrion;0.00736455174667797!GO:0051325;interphase;0.00740970854654938!GO:0006740;NADPH regeneration;0.00744888524681644!GO:0006098;pentose-phosphate shunt;0.00744888524681644!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00798918577080148!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00798918577080148!GO:0022403;cell cycle phase;0.00798918577080148!GO:0030521;androgen receptor signaling pathway;0.00827732600469267!GO:0008139;nuclear localization sequence binding;0.00966451846571846!GO:0004004;ATP-dependent RNA helicase activity;0.00977945701219752!GO:0051168;nuclear export;0.00984879336669836!GO:0015992;proton transport;0.0099004380385358!GO:0008180;signalosome;0.0104427795173301!GO:0006818;hydrogen transport;0.0109403697641956!GO:0007030;Golgi organization and biogenesis;0.0111483167315347!GO:0046483;heterocycle metabolic process;0.0111483167315347!GO:0006595;polyamine metabolic process;0.0112783061216231!GO:0006897;endocytosis;0.0114564165654169!GO:0010324;membrane invagination;0.0114564165654169!GO:0003690;double-stranded DNA binding;0.0114564165654169!GO:0008312;7S RNA binding;0.0115506860327993!GO:0022406;membrane docking;0.011556562644835!GO:0048278;vesicle docking;0.011556562644835!GO:0006506;GPI anchor biosynthetic process;0.0117956252450741!GO:0042158;lipoprotein biosynthetic process;0.0117956252450741!GO:0008047;enzyme activator activity;0.0119968781565184!GO:0006007;glucose catabolic process;0.0121474923504962!GO:0000087;M phase of mitotic cell cycle;0.0124521315304917!GO:0051252;regulation of RNA metabolic process;0.0127345613611648!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0127598609138802!GO:0000339;RNA cap binding;0.0135036417880599!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0135036417880599!GO:0015002;heme-copper terminal oxidase activity;0.0135036417880599!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0135036417880599!GO:0004129;cytochrome-c oxidase activity;0.0135036417880599!GO:0006383;transcription from RNA polymerase III promoter;0.0136253059725313!GO:0065007;biological regulation;0.0137247817304903!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0139958560546166!GO:0006778;porphyrin metabolic process;0.0140801273166701!GO:0033013;tetrapyrrole metabolic process;0.0140801273166701!GO:0016272;prefoldin complex;0.0140822161730785!GO:0003746;translation elongation factor activity;0.0140911223094567!GO:0007067;mitosis;0.0141096142762383!GO:0006643;membrane lipid metabolic process;0.0141096142762383!GO:0005862;muscle thin filament tropomyosin;0.0143691374366829!GO:0031301;integral to organelle membrane;0.0143837603444105!GO:0040008;regulation of growth;0.014390934585524!GO:0051087;chaperone binding;0.0147920725168539!GO:0006505;GPI anchor metabolic process;0.0149582544492421!GO:0051101;regulation of DNA binding;0.0150694239040335!GO:0006904;vesicle docking during exocytosis;0.0152697996989699!GO:0043065;positive regulation of apoptosis;0.0153152285415638!GO:0051059;NF-kappaB binding;0.0153244999001988!GO:0022890;inorganic cation transmembrane transporter activity;0.015606125862158!GO:0043068;positive regulation of programmed cell death;0.0161102590026834!GO:0006334;nucleosome assembly;0.0162309421580516!GO:0045792;negative regulation of cell size;0.0162894499650928!GO:0005774;vacuolar membrane;0.0172303723379348!GO:0033673;negative regulation of kinase activity;0.0174183455238136!GO:0006469;negative regulation of protein kinase activity;0.0174183455238136!GO:0003711;transcription elongation regulator activity;0.0175029362786252!GO:0004674;protein serine/threonine kinase activity;0.0177624135818047!GO:0031529;ruffle organization and biogenesis;0.0181274087892353!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0184600311918937!GO:0030308;negative regulation of cell growth;0.0184600311918937!GO:0005684;U2-dependent spliceosome;0.0184628847757497!GO:0043022;ribosome binding;0.0185061585653502!GO:0050681;androgen receptor binding;0.0188112546624458!GO:0008234;cysteine-type peptidase activity;0.019434569111702!GO:0003756;protein disulfide isomerase activity;0.019434569111702!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.019434569111702!GO:0042168;heme metabolic process;0.0197400050240992!GO:0006950;response to stress;0.0197400050240992!GO:0031625;ubiquitin protein ligase binding;0.0200314968758239!GO:0030518;steroid hormone receptor signaling pathway;0.0200314968758239!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0201272298488478!GO:0043492;ATPase activity, coupled to movement of substances;0.0203857464320098!GO:0008632;apoptotic program;0.0205342441934426!GO:0043488;regulation of mRNA stability;0.0205695470230502!GO:0043487;regulation of RNA stability;0.0205695470230502!GO:0001516;prostaglandin biosynthetic process;0.0211531746262899!GO:0046457;prostanoid biosynthetic process;0.0211531746262899!GO:0000209;protein polyubiquitination;0.021158272855694!GO:0030032;lamellipodium biogenesis;0.0212018976801639!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0214003877959298!GO:0051348;negative regulation of transferase activity;0.0215781450244947!GO:0030145;manganese ion binding;0.0228438015799253!GO:0000059;protein import into nucleus, docking;0.0230650382991585!GO:0016125;sterol metabolic process;0.0233891158401615!GO:0006417;regulation of translation;0.0235672049744468!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0237415678673288!GO:0005832;chaperonin-containing T-complex;0.0240329732224958!GO:0016408;C-acyltransferase activity;0.0240961439392255!GO:0005975;carbohydrate metabolic process;0.0254506852337742!GO:0043433;negative regulation of transcription factor activity;0.0258746224173717!GO:0051287;NAD binding;0.0261281997288218!GO:0035035;histone acetyltransferase binding;0.0271003895191149!GO:0004287;prolyl oligopeptidase activity;0.0272558284472444!GO:0030041;actin filament polymerization;0.0277440286380317!GO:0031497;chromatin assembly;0.0286455571167736!GO:0006289;nucleotide-excision repair;0.0287253884986695!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0289249364210054!GO:0051128;regulation of cellular component organization and biogenesis;0.02902861776466!GO:0031124;mRNA 3'-end processing;0.02902861776466!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0306740638946705!GO:0007021;tubulin folding;0.0307648147505075!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0308977662247216!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0308977662247216!GO:0030880;RNA polymerase complex;0.0308977662247216!GO:0051272;positive regulation of cell motility;0.0309044093017661!GO:0040017;positive regulation of locomotion;0.0309044093017661!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0309044093017661!GO:0006769;nicotinamide metabolic process;0.0312200274846737!GO:0030100;regulation of endocytosis;0.0323368312332044!GO:0006458;'de novo' protein folding;0.0328960858343354!GO:0051084;'de novo' posttranslational protein folding;0.0328960858343354!GO:0007242;intracellular signaling cascade;0.0335354160089142!GO:0007041;lysosomal transport;0.0337631779248982!GO:0030833;regulation of actin filament polymerization;0.0345998813618153!GO:0004177;aminopeptidase activity;0.0346507596325274!GO:0045892;negative regulation of transcription, DNA-dependent;0.036024372520691!GO:0005637;nuclear inner membrane;0.036024372520691!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0361820699756961!GO:0006739;NADP metabolic process;0.036570584637364!GO:0046822;regulation of nucleocytoplasmic transport;0.0367169595216878!GO:0006352;transcription initiation;0.0368416396636401!GO:0051270;regulation of cell motility;0.0372562372239423!GO:0007265;Ras protein signal transduction;0.0373115048982826!GO:0033559;unsaturated fatty acid metabolic process;0.0375862461180321!GO:0006636;unsaturated fatty acid biosynthetic process;0.0375862461180321!GO:0006354;RNA elongation;0.0377304882081297!GO:0008154;actin polymerization and/or depolymerization;0.0379783402143139!GO:0032507;maintenance of cellular protein localization;0.0388182480178381!GO:0044437;vacuolar part;0.0401672135037416!GO:0006118;electron transport;0.0419913957711451!GO:0008484;sulfuric ester hydrolase activity;0.0420819384987138!GO:0031371;ubiquitin conjugating enzyme complex;0.0424443293985965!GO:0006402;mRNA catabolic process;0.0429118842092949!GO:0030031;cell projection biogenesis;0.0429118842092949!GO:0050811;GABA receptor binding;0.043137393343266!GO:0051098;regulation of binding;0.0437604011302482!GO:0003923;GPI-anchor transamidase activity;0.0439463098482588!GO:0016255;attachment of GPI anchor to protein;0.0439463098482588!GO:0042765;GPI-anchor transamidase complex;0.0439463098482588!GO:0008147;structural constituent of bone;0.0442656956917042!GO:0050178;phenylpyruvate tautomerase activity;0.0442883197114246!GO:0005801;cis-Golgi network;0.0444918433919405!GO:0005874;microtubule;0.0447025114125898!GO:0051235;maintenance of localization;0.0447025114125898!GO:0006644;phospholipid metabolic process;0.0447260236772531!GO:0005784;translocon complex;0.0447691854325077!GO:0006378;mRNA polyadenylation;0.0450423217411649!GO:0050662;coenzyme binding;0.0451996775132788!GO:0015923;mannosidase activity;0.0456669607422183!GO:0006779;porphyrin biosynthetic process;0.0459582102803764!GO:0033014;tetrapyrrole biosynthetic process;0.0459582102803764!GO:0051540;metal cluster binding;0.0476773320424398!GO:0051536;iron-sulfur cluster binding;0.0476773320424398!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0476773320424398!GO:0030911;TPR domain binding;0.0478977360932513!GO:0005765;lysosomal membrane;0.0480653295986436!GO:0022408;negative regulation of cell-cell adhesion;0.0481619591169623!GO:0008022;protein C-terminus binding;0.0485108428262385!GO:0051539;4 iron, 4 sulfur cluster binding;0.0485108428262385!GO:0031970;organelle envelope lumen;0.0487247655325497!GO:0048144;fibroblast proliferation;0.0488500993251526!GO:0048145;regulation of fibroblast proliferation;0.0488500993251526!GO:0005583;fibrillar collagen;0.0497149361257654!GO:0043407;negative regulation of MAP kinase activity;0.0497149361257654!GO:0006066;alcohol metabolic process;0.0498926257245608
 |sample_id=11762
 |sample_note=
@@ Line 76: / Line 99: @@
 |sample_tissue=ovary
 |top_motifs=TAL1_TCF{3,4,12}:1.87361359991;HSF1,2:1.79600822895;HOX{A5,B5}:1.7862154745;GLI1..3:1.76558519414;GZF1:1.64673745846;NKX3-1:1.60383645957;HMGA1,2:1.54000105137;HIF1A:1.30933597337;NR6A1:1.23892799555;ESR1:1.23715053635;SMAD1..7,9:1.16858227478;ZIC1..3:1.13181973822;TEF:1.10184817833;GCM1,2:1.08049959722;ZNF238:1.07409800999;XBP1:1.06482449881;EVI1:1.04711708468;SRF:1.01560798921;TEAD1:0.984736590505;ATF6:0.983735351394;RXRA_VDR{dimer}:0.982530160643;ZNF423:0.943882230693;MYBL2:0.833987673951;UFEwm:0.828942117219;AIRE:0.822457103406;PAX4:0.795384539171;XCPE1{core}:0.78123410908;MAFB:0.780811360887;MAZ:0.780704851629;EN1,2:0.767389306852;IKZF1:0.754872259013;PAX5:0.754069055576;ONECUT1,2:0.753608988945;EBF1:0.745854287615;NKX3-2:0.738723469913;NFATC1..3:0.735930939721;NR3C1:0.724104624403;TFCP2:0.716764050535;RFX1:0.704990748938;RXR{A,B,G}:0.683707374751;NFE2L2:0.678578295686;GTF2I:0.675529656356;ZNF148:0.654307261139;DBP:0.653974602733;ZNF384:0.645900941603;PRDM1:0.64320553957;TLX1..3_NFIC{dimer}:0.599254193854;FOXM1:0.592996268092;GTF2A1,2:0.584563591546;TBP:0.583590733281;NKX2-1,4:0.53824054591;ZBTB6:0.52253378054;HMX1:0.517953139981;NFIX:0.517167557771;MZF1:0.50867618898;HOX{A4,D4}:0.507522093455;PAX6:0.506014267826;TP53:0.496868682962;ALX4:0.466794716447;BACH2:0.446163878189;SP1:0.432851628011;PAX1,9:0.428220838874;HLF:0.426833814893;FOS_FOS{B,L1}_JUN{B,D}:0.426264270148;NFE2L1:0.370721337675;TBX4,5:0.340641197761;STAT2,4,6:0.323463074287;LHX3,4:0.31725072662;PATZ1:0.309340779579;ZBTB16:0.307520160878;PPARG:0.298191002312;ALX1:0.295407518901;TLX2:0.285867061798;MTE{core}:0.284086976786;EP300:0.281631889435;TFAP2B:0.234271425829;GATA4:0.234197169991;NR1H4:0.228757269146;KLF4:0.228721177418;CRX:0.227323597459;TFAP4:0.226457190324;NFE2:0.22500703029;NANOG{mouse}:0.21601374047;ARID5B:0.209755193838;PBX1:0.200470774771;POU6F1:0.185160807788;PAX2:0.182109764994;HES1:0.179482035849;ATF2:0.178653713867;NFIL3:0.171605454102;RREB1:0.153706052607;NFKB1_REL_RELA:0.143894639452;EGR1..3:0.134646150567;SOX17:0.126356070586;HBP1_HMGB_SSRP1_UBTF:0.11456517203;FOX{I1,J2}:0.0977705504758;FOSL2:0.0924515558384;HNF1A:0.0920279516369;RUNX1..3:0.0798909160434;JUN:0.0760287430456;PAX8:0.0759353256836;CDX1,2,4:0.0622939245404;HIC1:0.0527114940913;ADNP_IRX_SIX_ZHX:0.0444334997628;SPZ1:0.0214955335615;PAX3,7:0.00257930691559;REST:0.00221700768693;AR:0.0014222826909;TOPORS:-0.0121816757369;GFI1B:-0.0130253340659;AHR_ARNT_ARNT2:-0.0178270039517;SREBF1,2:-0.0289555157864;NHLH1,2:-0.0535207540735;FOXP3:-0.0730375725975;bHLH_family:-0.0893443448047;CDC5L:-0.0923157210833;IRF7:-0.0985079020335;ELK1,4_GABP{A,B1}:-0.102759607277;IRF1,2:-0.109505229978;STAT5{A,B}:-0.124650390254;HAND1,2:-0.127879568867;STAT1,3:-0.128693161566;MEF2{A,B,C,D}:-0.129234945458;TFAP2{A,C}:-0.153767727024;CREB1:-0.153912610476;GATA6:-0.168828627079;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.173326807474;FOX{D1,D2}:-0.195944106247;LEF1_TCF7_TCF7L1,2:-0.206525963942;SOX2:-0.229608538201;NKX2-3_NKX2-5:-0.23119663055;POU5F1:-0.233335350082;HOXA9_MEIS1:-0.275151362581;CEBPA,B_DDIT3:-0.277058578782;MYFfamily:-0.282097450766;ZFP161:-0.300285603762;POU3F1..4:-0.321909069667;LMO2:-0.321971662029;MTF1:-0.331647171311;HNF4A_NR2F1,2:-0.340229655958;RFX2..5_RFXANK_RFXAP:-0.376395879788;NKX6-1,2:-0.387886417583;ESRRA:-0.393355358975;ATF5_CREB3:-0.40139649974;NRF1:-0.406185483885;FOXA2:-0.411241500452;MED-1{core}:-0.41499711731;DMAP1_NCOR{1,2}_SMARC:-0.415551035774;FOXL1:-0.423703302085;SNAI1..3:-0.434597667821;ZNF143:-0.43533341172;ETS1,2:-0.444440566562;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.485704598824;NANOG:-0.501557126628;TGIF1:-0.51368321513;POU2F1..3:-0.52921139317;SPI1:-0.538791879908;POU1F1:-0.554066058716;ELF1,2,4:-0.560995284386;FOXP1:-0.562169914801;FOXD3:-0.576691363451;SOX5:-0.603875761611;FOXQ1:-0.604698402185;ZEB1:-0.605948806281;RBPJ:-0.631813430434;FOXO1,3,4:-0.656198450252;MYOD1:-0.659087755608;ATF4:-0.660086409524;PRRX1,2:-0.667506435648;NKX2-2,8:-0.680507880534;NR5A1,2:-0.68733187043;FOXN1:-0.708063299593;E2F1..5:-0.711303316675;YY1:-0.72760481009;SPIB:-0.737520663563;IKZF2:-0.747381391267;MYB:-0.757862441225;GFI1:-0.801795268205;RORA:-0.814335328293;FOX{F1,F2,J1}:-0.826769491073;TFDP1:-0.860154664913;NFY{A,B,C}:-0.887445973516;BPTF:-0.92144964124;OCT4_SOX2{dimer}:-0.935642334216;CUX2:-0.981050018383;VSX1,2:-1.02885121659;SOX{8,9,10}:-1.09714254267;T:-1.19458675834;BREu{core}:-1.21231500928;PDX1:-1.32873893517;HOX{A6,A7,B6,B7}:-1.34599925113;PITX1..3:-1.57958536787
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11762-123H7;search_select_hide=table117:FF:11762-123H7
 }}

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FF:11762-123H7: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 18:18, 4 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0