FFCP PHASE1:Hg19::chr2:201997565..201997576,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8837 | |EntrezGene=8837 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1876 | |HGNC=1876 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_ENST00000470178_5end | |association_with_transcript=-18bp_to_ENST00000470178_5end | ||
|cluster_id=chr2:201997565..201997576,+ | |||
|coexpression_cluster_id=C844 | |coexpression_cluster_id=C844 | ||
|description=CAGE_peak_42_at_CFLAR_5end | |description=CAGE_peak_42_at_CFLAR_5end | ||
|id=chr2:201997565..201997576,+ | |id=chr2:201997565..201997576,+ | ||
|ontology_enrichment_celltype=CL:0000860;1.54e-40;33!CL:0002057;1.54e-40;33!CL:0000453;4.71e-40;5!CL:0000473;1.89e-29;39!CL:0000234;1.89e-29;39!CL:0000990;3.01e-22;8!CL:0000451;3.44e-18;10!CL:0000576;1.64e-17;48!CL:0001014;1.83e-17;2!CL:0001016;1.83e-17;2!CL:0000766;2.93e-13;69!CL:0002087;2.12e-11;104!CL:0000738;1.07e-08;136 | |ontology_enrichment_celltype=CL:0000738!8.54e-38!140;CL:0000557!4.72e-36!71;CL:0002057!2.56e-34!42;CL:0002009!8.83e-34!65;CL:0002031!7.56e-33!124;CL:0000839!3.30e-32!70;CL:0000860!1.99e-31!45;CL:0002087!4.46e-31!119;CL:0002194!1.45e-30!63;CL:0000576!1.45e-30!63;CL:0000040!1.45e-30!63;CL:0000559!1.45e-30!63;CL:0000766!1.55e-30!76;CL:0000037!1.17e-27!172;CL:0000566!1.17e-27!172;CL:0000988!1.40e-27!182;CL:0002032!4.30e-27!165;CL:0000837!4.30e-27!165;CL:0000763!4.10e-24!112;CL:0000049!4.10e-24!112;CL:0000990!3.31e-15!8;CL:0000451!4.02e-12!10;CL:0000453!4.29e-12!5;CL:0000840!3.17e-09!5;CL:0001029!3.17e-09!5 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;1.54e-40;33!CL:0002057;1.54e-40;33!CL:0000453;4.71e-40;5!CL:0000473;1.89e-29;39!CL:0000234;1.89e-29;39!CL:0000990;3.01e-22;8!CL:0000451;3.44e-18;10!CL:0000576;1.64e-17;48!CL:0001014;1.83e-17;2!CL:0001016;1.83e-17;2!CL:0000766;2.93e-13;69!CL:0002087;2.12e-11;104!CL:0000738;1.07e-08;136 | ||
|ontology_enrichment_disease=DOID:630;1.32e-09;1!DOID:0050177;1.32e-09;1!DOID:0050427;1.32e-09;1 | |ontology_enrichment_celltype_v019_2=CL:0000453,4.71e-40,5;CL:0000860,5.78e-35,42;CL:0002057,5.78e-35,42;CL:0000557,2.88e-31,67;CL:0002009,2.32e-30,61;CL:0000473,2.73e-30,48;CL:0000234,2.73e-30,48;CL:0000738,2.30e-27,136;CL:0000763,3.89e-26,108;CL:0000049,3.89e-26,108;CL:0000839,2.29e-24,66;CL:0002194,9.67e-24,59;CL:0000576,9.67e-24,59;CL:0000040,9.67e-24,59;CL:0000559,9.67e-24,59;CL:0002031,3.64e-23,120;CL:0002032,1.41e-22,161;CL:0000837,1.41e-22,161;CL:0000990,3.01e-22,8;CL:0000766,3.82e-22,72;CL:0000037,1.72e-21,168;CL:0000988,3.24e-20,177;CL:0000451,3.45e-18,10;CL:0001014,2.07e-17,2;CL:0001016,2.07e-17,2;CL:0002087,6.67e-17,115;CL:0000134,3.25e-08,354;CL:0002320,5.60e-08,361;CL:0000219,3.81e-07,386 | ||
|ontology_enrichment_uberon= | |ontology_enrichment_development_v019=CL:0002057;1.93e-23;42!CL:0000049;2.58e-07;108 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;1.32e-09;1!DOID:0050177;1.32e-09;1!DOID:0050427;1.32e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.32e-09,1;DOID:0050177,1.32e-09,1;DOID:0050427,1.32e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.89e-32!112;UBERON:0002390!4.29e-32!102;UBERON:0003061!4.29e-32!102;UBERON:0002371!1.09e-30!80;UBERON:0001474!9.71e-28!86;UBERON:0002405!1.74e-25!115;UBERON:0004765!2.58e-23!101;UBERON:0001434!2.58e-23!101;UBERON:0003081!2.61e-13!216;UBERON:0002204!7.19e-12!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.91e-27,76;UBERON:0001474,4.49e-25,82;UBERON:0002405,1.38e-24,93;UBERON:0002390,3.47e-23,98;UBERON:0003061,3.47e-23,98;UBERON:0004765,1.33e-22,90;UBERON:0002193,9.11e-21,108;UBERON:0001434,4.58e-20,100;UBERON:0002204,7.80e-11,167;UBERON:0003081,1.39e-09,203;UBERON:0002384,1.18e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0.236132343941038,0,0,0.154816123316076,0,0,0,0,0,0,0,0.601633342410425,0.434021741431704,0,0.32389366601898,0,0,0.377875943688809,0.242584061187816,0.697287110717054,0.822335776043652,1.85823822537062,0.28769239232215,0.256160706529101,0.236482229888585,3.7922024881028,4.51839278508678,2.70852973188684,0.564727018627814,0.545812300115692,0.449446968890169,5.81559395504715,2.56743221660875,14.7047538933779,0,0.199463657621632,0,3.48251086354301,1.70215567407342,4.35975574296902,0,1.0429658368404,0.217188844705117,4.84319602106695,2.20966581592539,4.1140110367315,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0.954053754535364,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.348259474598534,0.398873881556595,0,0,0,0.596287222100115,0,0,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0.702012795417713,0.445893486866185,0,0,0.283550194484773,0,0,0,17.243213326358,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,1.47701766553283,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0.104421949505455,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,5.39937339723601,3.0952078182318,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0.314408610199332,0,0,0.197611631897944,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72804432375144,2.12583744501381,2.9441770966052,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,0,0.45120521581504,1.79894080664872,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186224142887574,0,0.0636471582781649,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,4.48795889224526 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0.236132343941038,0,0,0.154816123316076,0,0,0,0,0,0,0,0.601633342410425,0.434021741431704,0,0.32389366601898,0,0,0.377875943688809,0.242584061187816,0.697287110717054,0.822335776043652,1.85823822537062,0.28769239232215,0.256160706529101,0.236482229888585,3.7922024881028,4.51839278508678,2.70852973188684,0.564727018627814,0.545812300115692,0.449446968890169,5.81559395504715,2.56743221660875,14.7047538933779,0,0.199463657621632,0,3.48251086354301,1.70215567407342,4.35975574296902,0,1.0429658368404,0.217188844705117,4.84319602106695,2.20966581592539,4.1140110367315,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0.954053754535364,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.348259474598534,0.398873881556595,0,0,0,0.596287222100115,0,0,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0.702012795417713,0.445893486866185,0,0,0.283550194484773,0,0,0,17.243213326358,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,1.47701766553283,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0.104421949505455,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,5.39937339723601,3.0952078182318,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0.314408610199332,0,0,0.197611631897944,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72804432375144,2.12583744501381,2.9441770966052,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,0,0.45120521581504,1.79894080664872,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186224142887574,0,0.0636471582781649,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,4.48795889224526 | ||
|short_description=p42@CFLAR | |short_description=p42@CFLAR | ||
}} | }} |
Latest revision as of 12:37, 19 September 2015
Short description: | p42@CFLAR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_42_at_CFLAR_5end |
Coexpression cluster: | C844_Mast_CD14_immature_Eosinophils_carcinoid_Natural_CD34 |
Association with transcript: | -18bp_to_ENST00000470178_5end |
EntrezGene: | CFLAR |
HGNC: | 1876 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.91e-27 | 76 |
bone element | 4.49e-25 | 82 |
immune system | 1.38e-24 | 93 |
hematopoietic system | 3.47e-23 | 98 |
blood island | 3.47e-23 | 98 |
skeletal element | 1.33e-22 | 90 |
hemolymphoid system | 9.11e-21 | 108 |
skeletal system | 4.58e-20 | 100 |
musculoskeletal system | 7.80e-11 | 167 |
lateral plate mesoderm | 1.39e-09 | 203 |
connective tissue | 1.18e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.32e-09 | 1 |
monogenic disease | 1.32e-09 | 1 |
xeroderma pigmentosum | 1.32e-09 | 1 |