FFCP PHASE1:Hg19::chr3:123522645..123522646,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:123522645..123522646,- | |||
|coexpression_cluster_id=C1749 | |coexpression_cluster_id=C1749 | ||
|description=CAGE_peak_at_chr3:123522645..123522646,- | |description=CAGE_peak_at_chr3:123522645..123522646,- | ||
|id=chr3:123522645..123522646,- | |id=chr3:123522645..123522646,- | ||
|ontology_enrichment_celltype=CL:0002262;5.96e-34;2!CL:1000398;5.96e-34;2!CL:0002569;2.19e-12;6!CL:0002540;2.59e-12;6!CL:0002092;6.34e-08;10!CL:0000081;2.32e-07;11!CL:0000182;8.14e-07;12 | |ontology_enrichment_celltype=CL:0002599!6.58e-50!1;CL:0002262!7.14e-26!2;CL:1000398!7.14e-26!2;CL:0002569!1.22e-09!6;CL:0002540!1.32e-09!6 | ||
| | |ontology_enrichment_celltype_v019=CL:0002262;5.96e-34;2!CL:1000398;5.96e-34;2!CL:0002569;2.19e-12;6!CL:0002540;2.59e-12;6!CL:0002092;6.34e-08;10!CL:0000081;2.32e-07;11!CL:0000182;8.14e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0002262,7.05e-34,2;CL:1000398,7.05e-34,2;CL:0002569,2.19e-12,6;CL:0002540,2.45e-12,6;CL:0002092,6.13e-08,10;CL:0000081,2.32e-07,11;CL:0000182,8.38e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001281;5.96e-34;2!UBERON:0003497;5.96e-34;2!UBERON:0003909;5.96e-34;2!UBERON:0003835;5.96e-34;2!UBERON:0001280;3.66e-23;3!UBERON:0004647;3.66e-23;3!UBERON:0003422;2.19e-12;6!UBERON:0003104;8.16e-11;7!UBERON:0009142;8.16e-11;7!UBERON:0003513;9.43e-11;7!UBERON:0002331;5.73e-08;10!UBERON:0002371;8.14e-07;12 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003497!9.46e-18!3;UBERON:0003909!9.46e-18!3;UBERON:0003835!9.46e-18!3;UBERON:0001281!9.46e-18!3;UBERON:0001280!1.13e-13!4;UBERON:0004647!1.13e-13!4;UBERON:0001043!1.29e-13!4;UBERON:0009143!1.29e-13!4;UBERON:0003422!1.22e-09!6;UBERON:0003513!1.69e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;5.96e-34;2!UBERON:0003497;5.96e-34;2!UBERON:0003909;5.96e-34;2!UBERON:0003835;5.96e-34;2!UBERON:0001280;3.66e-23;3!UBERON:0004647;3.66e-23;3!UBERON:0003422;2.19e-12;6!UBERON:0003104;8.16e-11;7!UBERON:0009142;8.16e-11;7!UBERON:0003513;9.43e-11;7!UBERON:0002331;5.73e-08;10!UBERON:0002371;8.14e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,7.05e-34,2;UBERON:0003497,7.05e-34,2;UBERON:0003909,7.05e-34,2;UBERON:0003835,7.05e-34,2;UBERON:0001280,4.09e-23,3;UBERON:0004647,4.09e-23,3;UBERON:0005171,4.09e-23,3;UBERON:0003422,2.19e-12,6;UBERON:0002394,2.74e-12,6;UBERON:0003928,2.74e-12,6;UBERON:0003513,9.89e-11,7;UBERON:0002294,1.21e-08,9;UBERON:0001173,1.21e-08,9;UBERON:0004912,1.21e-08,9;UBERON:0002331,5.73e-08,10;UBERON:0000358,5.73e-08,10;UBERON:0000307,5.73e-08,10;UBERON:0000091,5.73e-08,10;UBERON:0000087,5.73e-08,10;UBERON:0007010,5.73e-08,10;UBERON:0007806,5.73e-08,10;UBERON:0008780,5.73e-08,10;UBERON:0005728,5.73e-08,10 | |||
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|short_description=p@chr3:123522645..123522646,- | |short_description=p@chr3:123522645..123522646,- | ||
}} | }} |
Latest revision as of 15:11, 29 July 2015
Short description: | p@chr3:123522645..123522646, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:123522645..123522646, - |
Coexpression cluster: | C1749_Multipotent_Olfactory_Hepatic_Fibroblast_Ewing_Preadipocyte_Lens |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 7.05e-34 | 2 |
endothelial cell of hepatic sinusoid | 7.05e-34 | 2 |
mesenchymal stem cell of umbilical cord | 2.19e-12 | 6 |
mesenchymal stem cell of the bone marrow | 2.45e-12 | 6 |
bone marrow cell | 6.13e-08 | 10 |
blood cell | 2.32e-07 | 11 |
hepatocyte | 8.38e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 7.05e-34 | 2 |
abdomen blood vessel | 7.05e-34 | 2 |
sinusoid | 7.05e-34 | 2 |
abdominal segment blood vessel | 7.05e-34 | 2 |
liver parenchyma | 4.09e-23 | 3 |
liver lobule | 4.09e-23 | 3 |
hepatic duct | 4.09e-23 | 3 |
mesenchyme of umbilical cord | 2.19e-12 | 6 |
bile duct | 2.74e-12 | 6 |
digestive system duct | 2.74e-12 | 6 |
trunk blood vessel | 9.89e-11 | 7 |
biliary system | 1.21e-08 | 9 |
biliary tree | 1.21e-08 | 9 |
biliary bud | 1.21e-08 | 9 |
umbilical cord | 5.73e-08 | 10 |
blastocyst | 5.73e-08 | 10 |
blastula | 5.73e-08 | 10 |
bilaminar disc | 5.73e-08 | 10 |
inner cell mass | 5.73e-08 | 10 |
cleaving embryo | 5.73e-08 | 10 |
connecting stalk | 5.73e-08 | 10 |
inner cell mass derived epiblast | 5.73e-08 | 10 |
extraembryonic mesoderm | 5.73e-08 | 10 |