FFCP PHASE1:Hg19::chr10:60042657..60042682,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55847 | |EntrezGene=55847 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=30880 | |HGNC=30880 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-22bp_to_uc001jkd.3_5end | |association_with_transcript=-22bp_to_uc001jkd.3_5end | ||
|cluster_id=chr10:60042657..60042682,+ | |||
|description=CAGE_peak_3_at_CISD1_5end | |description=CAGE_peak_3_at_CISD1_5end | ||
|id=chr10:60042657..60042682,+ | |id=chr10:60042657..60042682,+ | ||
|ontology_enrichment_celltype=CL:0002545;6.83e-14;2!CL:0000071;2.19e-12;18!CL:0002539;4.86e-11;10!CL:0002544;3.54e-10;6!CL:0002144;9.71e-10;3!CL:0002139;3.70e-09;24!CL:0000946;1.22e-07;1!CL:0000786;1.22e-07;1!CL:0000569;1.96e-07;4!CL:1000413;6.15e-07;9!CL:0000359;7.24e-07;32 | |ontology_enrichment_celltype=CL:0002139!8.63e-15!24;CL:0000071!1.04e-11!18;CL:0002546!1.04e-11!18;CL:0000115!1.03e-08!35;CL:0002078!4.06e-07!44 | ||
| | |ontology_enrichment_celltype_v019=CL:0002545;6.83e-14;2!CL:0000071;2.19e-12;18!CL:0002539;4.86e-11;10!CL:0002544;3.54e-10;6!CL:0002144;9.71e-10;3!CL:0002139;3.70e-09;24!CL:0000946;1.22e-07;1!CL:0000786;1.22e-07;1!CL:0000569;1.96e-07;4!CL:1000413;6.15e-07;9!CL:0000359;7.24e-07;32 | ||
|ontology_enrichment_disease=DOID:4960;2.70e-08;1!DOID:0070004;2.70e-08;1!DOID:2355;3.80e-08;1 | |ontology_enrichment_celltype_v019_2=CL:0002545,9.17e-14,2;CL:0000071,2.36e-12,18;CL:0002546,2.36e-12,18;CL:0002539,4.87e-11,10;CL:0002544,5.18e-10,6;CL:0002144,8.16e-10,3;CL:0002139,3.90e-09,24;CL:0000946,1.11e-07,1;CL:0000786,1.11e-07,1;CL:0000980,1.11e-07,1;CL:0000569,1.65e-07,4;CL:0000011,1.65e-07,4;CL:0000359,4.93e-07,32;CL:1000413,7.88e-07,9 | ||
|ontology_enrichment_uberon=UBERON:0004573;5.29e-15;33!UBERON:0004571;5.29e-15;33!UBERON:0000947;1.39e-14;21!UBERON:0010191;1.39e-14;21!UBERON:0005800;6.83e-14;2!UBERON:0001515;6.83e-14;2!UBERON:0004638;2.19e-12;18!UBERON:0001986;2.19e-12;18!UBERON:0004852;2.19e-12;18!UBERON:0004237;4.86e-11;10!UBERON:0004695;4.86e-11;10!UBERON:0002111;4.86e-11;10!UBERON:0004178;4.86e-11;10!UBERON:0000487;4.86e-10;22!UBERON:0010523;9.71e-10;3!UBERON:0001915;9.71e-10;3!UBERON:0001982;9.71e-10;3!UBERON:0001637;1.88e-09;42!UBERON:0003509;1.88e-09;42!UBERON:0004572;1.88e-09;42!UBERON:0006914;9.03e-09;25!UBERON:0007500;1.55e-07;56!UBERON:0001981;1.55e-07;56!UBERON:0004537;1.55e-07;56!UBERON:0001135;2.19e-07;15!UBERON:0003915;6.15e-07;9!UBERON:0004700;6.15e-07;9!UBERON:0001917;6.15e-07;9 | |ontology_enrichment_development_v019=CL:0002546;2.19e-12;18!CL:0000011;1.96e-07;4 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;2.70e-08;1!DOID:0070004;2.70e-08;1!DOID:2355;3.80e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,2.70e-08,1;DOID:0070004,2.70e-08,1;DOID:2355,3.55e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000055!5.79e-12!69;UBERON:0004872!8.56e-12!84;UBERON:0001986!1.04e-11!18;UBERON:0004638!1.04e-11!18;UBERON:0004852!1.04e-11!18;UBERON:0004535!1.09e-10!110;UBERON:0001981!2.65e-10!60;UBERON:0007500!2.65e-10!60;UBERON:0004537!2.65e-10!60;UBERON:0006965!2.65e-10!60;UBERON:0001009!3.86e-10!113;UBERON:0002049!1.90e-09!79;UBERON:0007798!1.90e-09!79;UBERON:0000487!5.41e-09!22;UBERON:0001637!7.39e-08!42;UBERON:0003509!7.39e-08!42;UBERON:0004572!7.39e-08!42;UBERON:0006914!1.52e-07!25;UBERON:0004573!1.54e-07!33;UBERON:0004571!1.54e-07!33;UBERON:0003081!2.34e-07!216;UBERON:0000947!6.57e-07!21;UBERON:0010191!6.57e-07!21;UBERON:0003914!9.93e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.29e-15;33!UBERON:0004571;5.29e-15;33!UBERON:0000947;1.39e-14;21!UBERON:0010191;1.39e-14;21!UBERON:0005800;6.83e-14;2!UBERON:0001515;6.83e-14;2!UBERON:0004638;2.19e-12;18!UBERON:0001986;2.19e-12;18!UBERON:0004852;2.19e-12;18!UBERON:0004237;4.86e-11;10!UBERON:0004695;4.86e-11;10!UBERON:0002111;4.86e-11;10!UBERON:0004178;4.86e-11;10!UBERON:0000487;4.86e-10;22!UBERON:0010523;9.71e-10;3!UBERON:0001915;9.71e-10;3!UBERON:0001982;9.71e-10;3!UBERON:0001637;1.88e-09;42!UBERON:0003509;1.88e-09;42!UBERON:0004572;1.88e-09;42!UBERON:0006914;9.03e-09;25!UBERON:0007500;1.55e-07;56!UBERON:0001981;1.55e-07;56!UBERON:0004537;1.55e-07;56!UBERON:0001135;2.19e-07;15!UBERON:0003915;6.15e-07;9!UBERON:0004700;6.15e-07;9!UBERON:0001917;6.15e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,1.12e-14,33;UBERON:0004571,1.12e-14,33;UBERON:0004872,1.17e-14,83;UBERON:0000947,1.78e-14,21;UBERON:0010191,1.78e-14,21;UBERON:0005800,9.17e-14,2;UBERON:0001515,9.17e-14,2;UBERON:0007500,1.03e-13,59;UBERON:0001981,1.03e-13,59;UBERON:0004537,1.03e-13,59;UBERON:0006965,1.03e-13,59;UBERON:0004638,2.36e-12,18;UBERON:0001986,2.36e-12,18;UBERON:0004852,2.36e-12,18;UBERON:0000055,1.33e-11,68;UBERON:0001637,3.20e-11,42;UBERON:0003509,3.20e-11,42;UBERON:0004572,3.20e-11,42;UBERON:0003081,4.09e-11,203;UBERON:0004237,4.87e-11,10;UBERON:0004695,4.87e-11,10;UBERON:0002111,4.87e-11,10;UBERON:0004178,4.87e-11,10;UBERON:0004535,1.89e-10,109;UBERON:0001009,4.31e-10,112;UBERON:0000487,5.16e-10,22;UBERON:0002049,7.94e-10,78;UBERON:0007798,7.94e-10,78;UBERON:0010523,8.16e-10,3;UBERON:0001915,8.16e-10,3;UBERON:0001982,8.16e-10,3;UBERON:0003914,1.55e-09,117;UBERON:0006914,9.51e-09,25;UBERON:0000926,4.52e-08,315;UBERON:0004120,4.52e-08,315;UBERON:0006603,4.52e-08,315;UBERON:0001135,2.19e-07,15;UBERON:0003915,7.88e-07,9;UBERON:0004700,7.88e-07,9;UBERON:0001917,7.88e-07,9 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0,0,0,4.03395087871065,3.61616716814386,7.30310090387373,3.41552959153355,0,0,0,0,0,0,0.305653622991805,0.410502947249729,0.314843125254717,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,1.43846196161075,0.512321413058201,0.47296445977717,2.06847408441971,0,0,0,0,0,2.75475503133812,1.28371610830437,5.11469700639233,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0.112328631146495,0,0,0.570025487482497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0,0.164437904603676,0.276350017785848,0,0.14828656316206,0,0,0,0.383220493601921,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,1.04142150482278,0,0,0,0.417989933073621,0.258416759169329,0,0.66944122552934,5.63961043952806,1.52054421143703,0.24406205754817,1.10298924103761,2.43042584364528,0.357198913136319,0,0.337834441449967,1.53316637465883,0,0.549605231791222,0,0,0,0,0,0,0,0,0,1.06748995729705,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,1.1240175325762,0.100528972411631,0,0,0,0,0,0,0.433099343283221,0,0.380508304469197,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07701771673448,0,0.120859449591622,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0.680374821106063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,0.127612712494584,0.10115778085555,0,0.31481234683064,0,0.924100740528266,0,0,0.18532421910392,0.572499546967965,0,0,0,0,0,0,0,0,0,0,0,0,1.68503382495592,0.48763373908959,4.14312932373184,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.48111056362756,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0.371606350251437,0,0.711418433484141,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1761953271524,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14899327122344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5543720058278,3.40066844976158,1.27437413730962,0.449803112163605,0.776314784381297,0,0,0,0,0.380805212168795,1.22061219961398,0.181848659202559,0.429642228169954,0,0.796191777397232,0,0,0,0,1.54095864325843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0.106691729694141,8.09410404405834,0,0,0.279759015438889,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,1.38280785066935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0.12729431655633,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0,0,0,4.03395087871065,3.61616716814386,7.30310090387373,3.41552959153355,0,0,0,0,0,0,0.305653622991805,0.410502947249729,0.314843125254717,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,1.43846196161075,0.512321413058201,0.47296445977717,2.06847408441971,0,0,0,0,0,2.75475503133812,1.28371610830437,5.11469700639233,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0.112328631146495,0,0,0.570025487482497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0,0.164437904603676,0.276350017785848,0,0.14828656316206,0,0,0,0.383220493601921,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,1.04142150482278,0,0,0,0.417989933073621,0.258416759169329,0,0.66944122552934,5.63961043952806,1.52054421143703,0.24406205754817,1.10298924103761,2.43042584364528,0.357198913136319,0,0.337834441449967,1.53316637465883,0,0.549605231791222,0,0,0,0,0,0,0,0,0,1.06748995729705,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,1.1240175325762,0.100528972411631,0,0,0,0,0,0,0.433099343283221,0,0.380508304469197,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07701771673448,0,0.120859449591622,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0.680374821106063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,0.127612712494584,0.10115778085555,0,0.31481234683064,0,0.924100740528266,0,0,0.18532421910392,0.572499546967965,0,0,0,0,0,0,0,0,0,0,0,0,1.68503382495592,0.48763373908959,4.14312932373184,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.48111056362756,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0.371606350251437,0,0.711418433484141,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1761953271524,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14899327122344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5543720058278,3.40066844976158,1.27437413730962,0.449803112163605,0.776314784381297,0,0,0,0,0.380805212168795,1.22061219961398,0.181848659202559,0.429642228169954,0,0.796191777397232,0,0,0,0,1.54095864325843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0.106691729694141,8.09410404405834,0,0,0.279759015438889,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,1.38280785066935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0.12729431655633,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p3@CISD1 | |short_description=p3@CISD1 | ||
}} | }} |
Latest revision as of 14:21, 18 September 2015
Short description: | p3@CISD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CISD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -22bp_to_uc001jkd.3_5end |
EntrezGene: | CISD1 |
HGNC: | 30880 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thoracic aorta endothelial cell | 9.17e-14 | 2 |
blood vessel endothelial cell | 2.36e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.36e-12 | 18 |
aortic smooth muscle cell | 4.87e-11 | 10 |
aortic endothelial cell | 5.18e-10 | 6 |
capillary endothelial cell | 8.16e-10 | 3 |
endothelial cell of vascular tree | 3.90e-09 | 24 |
antibody secreting cell | 1.11e-07 | 1 |
plasma cell | 1.11e-07 | 1 |
plasmablast | 1.11e-07 | 1 |
cardiac mesenchymal cell | 1.65e-07 | 4 |
migratory trunk neural crest cell | 1.65e-07 | 4 |
vascular associated smooth muscle cell | 4.93e-07 | 32 |
endothelial cell of artery | 7.88e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 2.70e-08 | 1 |
myeloma | 2.70e-08 | 1 |
anemia | 3.55e-08 | 1 |