FFCP PHASE1:Hg19::chr6:114292467..114292474,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3066 | |EntrezGene=3066 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4853 | |HGNC=4853 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_ENST00000519065_5end | |association_with_transcript=-18bp_to_ENST00000519065_5end | ||
|cluster_id=chr6:114292467..114292474,- | |||
|description=CAGE_peak_4_at_HDAC2_5end | |description=CAGE_peak_4_at_HDAC2_5end | ||
|id=chr6:114292467..114292474,- | |id=chr6:114292467..114292474,- | ||
|ontology_enrichment_celltype=CL:0000473;6.42e-29;39!CL:0000234;6.42e-29;39!CL:0000576;2.45e-25;48!CL:0000860;3.14e-25;33!CL:0002057;3.14e-25;33!CL:0000766;1.01e-22;69!CL:0000763;1.71e-20;100!CL:0000451;5.71e-13;10!CL:0000840;3.09e-12;5!CL:0000988;3.58e-12;177!CL:0000738;6.02e-12;136!CL:0000235;7.66e-11;6!CL:0000990;3.77e-10;8!CL:0000236;1.27e-09;13!CL:0002087;1.07e-08;104!CL:0002393;5.29e-07;6!CL:0002397;5.29e-07;6 | |ontology_enrichment_celltype=CL:0000763!1.70e-42!112;CL:0000049!1.70e-42!112;CL:0000037!1.91e-41!172;CL:0000566!1.91e-41!172;CL:0000988!3.49e-39!182;CL:0002032!1.03e-37!165;CL:0000837!1.03e-37!165;CL:0000557!1.12e-33!71;CL:0000766!7.16e-33!76;CL:0002009!2.99e-32!65;CL:0000738!3.43e-31!140;CL:0000839!6.97e-31!70;CL:0002194!7.21e-31!63;CL:0000576!7.21e-31!63;CL:0000040!7.21e-31!63;CL:0000559!7.21e-31!63;CL:0002031!8.91e-26!124;CL:0002087!1.26e-25!119;CL:0002057!2.19e-23!42;CL:0000860!1.98e-21!45;CL:0000219!2.31e-10!390;CL:0000134!9.26e-10!358;CL:0000034!8.40e-09!444;CL:0002320!1.05e-08!365;CL:0000723!3.27e-07!436;CL:0000048!5.45e-07!430 | ||
| | |ontology_enrichment_celltype_v019=CL:0000473;6.42e-29;39!CL:0000234;6.42e-29;39!CL:0000576;2.45e-25;48!CL:0000860;3.14e-25;33!CL:0002057;3.14e-25;33!CL:0000766;1.01e-22;69!CL:0000763;1.71e-20;100!CL:0000451;5.71e-13;10!CL:0000840;3.09e-12;5!CL:0000988;3.58e-12;177!CL:0000738;6.02e-12;136!CL:0000235;7.66e-11;6!CL:0000990;3.77e-10;8!CL:0000236;1.27e-09;13!CL:0002087;1.07e-08;104!CL:0002393;5.29e-07;6!CL:0002397;5.29e-07;6 | ||
|ontology_enrichment_disease=DOID:8692;1.70e-17;31!DOID:1240;6.26e-14;39!DOID:2531;2.67e-08;51!DOID:0060083;2.67e-08;51 | |ontology_enrichment_celltype_v019_2=CL:0000763,5.67e-72,108;CL:0000049,5.67e-72,108;CL:0000037,9.52e-65,168;CL:0000988,8.87e-62,177;CL:0002032,1.68e-59,161;CL:0000837,1.68e-59,161;CL:0000557,2.77e-59,67;CL:0002009,2.34e-58,61;CL:0002194,4.80e-55,59;CL:0000576,4.80e-55,59;CL:0000040,4.80e-55,59;CL:0000559,4.80e-55,59;CL:0000766,3.32e-54,72;CL:0000839,3.93e-52,66;CL:0000738,6.27e-47,136;CL:0000473,1.28e-43,48;CL:0000234,1.28e-43,48;CL:0002031,1.69e-39,120;CL:0002087,1.04e-38,115;CL:0000860,8.55e-35,42;CL:0002057,8.55e-35,42;CL:0000134,4.34e-20,354;CL:0002320,3.12e-19,361;CL:0000219,3.69e-18,386;CL:0000034,9.72e-18,441;CL:0000048,1.06e-15,427;CL:0000723,3.85e-15,433;CL:0000451,7.35e-13,10;CL:0000840,2.29e-12,5;CL:0001029,2.29e-12,5;CL:0000235,1.07e-10,6;CL:0000990,3.19e-10,8;CL:0000236,4.54e-09,14;CL:0002393,1.26e-08,9;CL:0002397,1.26e-08,9 | ||
|ontology_enrichment_uberon= | |ontology_enrichment_development_v019=CL:0002057;6.58e-25;42!CL:0000049;7.00e-20;108 | ||
|ontology_enrichment_disease=DOID:8692!1.49e-10!31;DOID:2531!1.78e-10!51;DOID:0060083!1.78e-10!51;DOID:1240!2.94e-10!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.70e-17;31!DOID:1240;6.26e-14;39!DOID:2531;2.67e-08;51!DOID:0060083;2.67e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.11e-18,31;DOID:1240,5.45e-17,39;DOID:2531,5.24e-14,51;DOID:0060083,5.24e-14,51 | |||
|ontology_enrichment_uberon=UBERON:0002371!7.58e-27!80;UBERON:0001474!2.88e-26!86;UBERON:0002390!7.87e-26!102;UBERON:0003061!7.87e-26!102;UBERON:0002193!1.22e-22!112;UBERON:0004765!5.14e-20!101;UBERON:0001434!5.14e-20!101;UBERON:0002405!1.42e-16!115;UBERON:0002384!1.76e-08!375;UBERON:0002204!2.05e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.42e-52,76;UBERON:0001474,1.53e-47,82;UBERON:0002390,1.32e-42,98;UBERON:0003061,1.32e-42,98;UBERON:0004765,7.03e-42,90;UBERON:0002405,5.22e-40,93;UBERON:0002193,4.29e-37,108;UBERON:0001434,4.39e-36,100;UBERON:0002384,9.73e-19,371;UBERON:0002204,3.18e-16,167;UBERON:0003081,5.55e-15,203 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0.730310090387373,0,0.246242116153576,0.204000691244253,0,0.286235987131057,0.684372125364421,0.376627918784408,0.61130724598361,0.656804715599566,0.708397031823113,0,0.767658796194425,0.619264493264304,0,0.30120591877825,0,0.154934401160603,1.56386155736164,1.46800219667424,1.66198622559563,3.81034450193269,1.73608696572681,1.11957737119962,2.26725566213286,0.77272670290256,1.16318591023652,0.755751887377619,2.18325655069035,3.25400651667958,2.05583944010913,0.929119112685311,0.863077176966451,1.5369642391746,2.12834006899727,2.41321976515633,1.29096936716765,6.77132432971709,1.50593871634084,2.45615535052061,0.449446968890169,2.14258724659632,0.962787081228281,0.639337125799041,1.9791078011203,1.99463657621632,1.70489900213078,1.45104619314292,3.40431134814684,1.24564449799115,3.26623264833766,0.521482918420201,2.17188844705117,1.81619850790011,0.736555271975129,1.26584954976354,1.47878700418359,1.4882300997553,0.628975936525128,1.12328631146495,1.50176892841506,1.92870704036496,1.42506371870624,0.79566670879636,1.27864907635244,3.51992488922645,1.09227722252426,0,1.70692089026603,2.00197993518006,0,1.98313461835459,0.954053754535364,3.41527781465669,1.76171156811282,1.52909291250092,2.64342657158052,0.560508562981536,1.58030450865046,0.393419540227666,0,0,0.167186495390678,0,0.946895611469467,0,0,0.294605907474837,0,0,0,0,0,0.552700035571697,0.289803085735052,0.14828656316206,0.267540828089713,0,0.113309342697566,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.434473211648397,0,0.670700859703636,0.12786256184353,0.361439152384566,0.50133791063589,0.144846518960824,0,0,0.378139268656271,1.10864698731282,0.527008714158756,0.327447688744282,0,0,6.81549526674835,9.40300581416043,4.52057065764142,2.8618874916641,2.28797964312051,1.11437250398869,0,0,1.04142150482278,1.13061588384802,0,0,0.208994966536811,0,0.71153252537342,0,0,0,0,0.367663080345869,0,0.267899184852239,0.44905874525234,0.112611480483322,0,0.949265659568129,0.183201743930407,3.9534125230819,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.352303495931295,0.323745888736263,0.702254033511242,0.408308342509787,0,0,0,0,0,0,0,0.750711119231785,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0.358779271377724,0,0,0,0,0.257640540045629,0,0.337552664482532,0.0974370051611986,0,0,0,0,0.302256294682921,0.169560592310488,0.193260853163297,0,0.286804595389004,0.609868530647977,1.45782745153634,1.16193942869518,0.207322110030741,1.00928340350251,1.82488679537915,0,0,0,0,0,0.591534000199219,0.168584690078102,0.482022059766964,0.220587945464788,0.217879444092406,0.474541238222193,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0.590789906681404,1.32438929824395,0.122988438543114,0,0.219500570817251,0,0.402115889646523,0.0925884451585296,0,0,0,0.115930404975077,0,0.144366447761074,0,0.570762456703795,0,0,3.69325509131096,1.17002132569619,3.12125440806329,0,0,0,0,0.290633938513962,0,0,0.528290604079356,1.4512968087854,1.15295962733569,0.75745460055828,0.253991577168676,0,0,0,0.102827492703324,0,0.571652865261156,0.448524337381443,0,0.5867062865676,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.399891964728228,1.2162378064119,1.50677127429638,4.21667878966063,0,1.14861935834114,0,0.144781306667579,0,0.358121926479791,0,0.591092280605782,0,0,0.254094624222463,1.30139853857622,0,0.167516265334349,0.637938751653163,0.749007023947182,2.99161459204025,4.14415513436035,0,0,0,0.207970861530807,0.713715955188647,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,0.620304078368662,2.37285620900479,0.74709290462411,0.303127571446259,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0.384417447767103,0,0.160853921143607,0,0.462629081407967,0,0,1.03850885836724,0,0.241718899183244,0,0,0.114814448164607,0,0.524497659837696,0,0.385076685522074,0,0,0,0,0.340187410553031,0.647747748306418,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0.657779629937804,0,0.512900250232778,0,0,0.515205058238611,0.640986253728404,0.742585499285292,1.14853107599234,0,0,0.096670718292122,0,0.15350367472613,0,0.107420244868274,0.435050081742686,0.170453254832202,0.267096106940212,0,0,0,0.2023155617111,0.464845549297286,0,0,0,0,0,0,0.429374660225974,0,0,0.38126038784765,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,0,1.05650146756755,0,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0.281695602532241,0.573645408816206,0,0,0,0.211107635297664,0,0.379473173765715,0,0.0962221127255121,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,1.52927441428475,0.569647187174163,1.90585420366231,0.411362273086194,0.648473311192717,0,0,0.106824071127473,0.962479855263359,0,1.48642540100575,2.74111504655245,0.497992903438899,0.637705090915289,1.1974762285969,1.1490322207942,0.635020748171649,2.921597462471,2.24637742490767,2.05411211129873,2.820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| ||
|short_description=p4@HDAC2 | |short_description=p4@HDAC2 | ||
}} | }} |
Latest revision as of 23:59, 19 September 2015
Short description: | p4@HDAC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HDAC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_ENST00000519065_5end |
EntrezGene: | HDAC2 |
HGNC: | 4853 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.42e-52 | 76 |
bone element | 1.53e-47 | 82 |
hematopoietic system | 1.32e-42 | 98 |
blood island | 1.32e-42 | 98 |
skeletal element | 7.03e-42 | 90 |
immune system | 5.22e-40 | 93 |
hemolymphoid system | 4.29e-37 | 108 |
skeletal system | 4.39e-36 | 100 |
connective tissue | 9.73e-19 | 371 |
musculoskeletal system | 3.18e-16 | 167 |
lateral plate mesoderm | 5.55e-15 | 203 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.11e-18 | 31 |
leukemia | 5.45e-17 | 39 |
hematologic cancer | 5.24e-14 | 51 |
immune system cancer | 5.24e-14 | 51 |