FFCP PHASE1:Hg19::chr12:20522622..20522638,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5139 | |EntrezGene=5139 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8778 | |HGNC=8778 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-420bp_to_ENST00000542675_5end | |association_with_transcript=-420bp_to_ENST00000542675_5end | ||
|cluster_id=chr12:20522622..20522638,+ | |||
|coexpression_cluster_id=C1012 | |coexpression_cluster_id=C1012 | ||
|description=CAGE_peak_1_at_PDE3A_5end | |description=CAGE_peak_1_at_PDE3A_5end | ||
|id=chr12:20522622..20522638,+ | |id=chr12:20522622..20522638,+ | ||
|ontology_enrichment_celltype=CL:0000071;4.05e-08;18!CL:0002139;5.14e-07;24 | |ontology_enrichment_celltype=CL:0000183!1.08e-08!59;CL:0000187!3.78e-08!54;CL:0000071!4.13e-08!18;CL:0002546!4.13e-08!18;CL:0000680!8.32e-08!57;CL:0000056!8.32e-08!57;CL:0000355!8.32e-08!57;CL:0000393!1.11e-07!60;CL:0000211!1.11e-07!60;CL:0000222!2.57e-07!119;CL:0002139!4.05e-07!24 | ||
| | |ontology_enrichment_celltype_v019=CL:0000071;4.05e-08;18!CL:0002139;5.14e-07;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000071,3.30e-08,18;CL:0002546,3.30e-08,18;CL:0000187,1.96e-07,55;CL:0000680,3.32e-07,58;CL:0000056,3.32e-07,58;CL:0000355,3.32e-07,58;CL:0002139,5.48e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002546;4.05e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0007100;2.46e-10;25!UBERON:0001637;1.58e-09;42!UBERON:0003509;1.58e-09;42!UBERON:0004572;1.58e-09;42!UBERON:0000948;3.21e-08;22!UBERON:0004638;4.05e-08;18!UBERON:0001986;4.05e-08;18!UBERON:0004852;4.05e-08;18!UBERON:0004573;7.39e-08;33!UBERON:0004571;7.39e-08;33!UBERON:0001737;1.33e-07;9!UBERON:0001557;1.33e-07;9!UBERON:0007500;6.12e-07;56!UBERON:0001981;6.12e-07;56!UBERON:0004537;6.12e-07;56!UBERON:0000487;8.01e-07;22 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.38e-23!115;UBERON:0000477!5.48e-22!286;UBERON:0004872!4.37e-21!84;UBERON:0001009!8.61e-21!113;UBERON:0000025!8.88e-21!194;UBERON:0004535!4.75e-19!110;UBERON:0000468!8.91e-19!659;UBERON:0004111!1.76e-16!241;UBERON:0003914!3.53e-15!118;UBERON:0001981!1.04e-14!60;UBERON:0007500!1.04e-14!60;UBERON:0004537!1.04e-14!60;UBERON:0006965!1.04e-14!60;UBERON:0002049!1.70e-14!79;UBERON:0007798!1.70e-14!79;UBERON:0000922!3.19e-14!612;UBERON:0000055!1.17e-13!69;UBERON:0000481!1.18e-13!347;UBERON:0000119!2.04e-13!312;UBERON:0000467!2.91e-13!625;UBERON:0000480!4.87e-13!626;UBERON:0002050!5.45e-13!605;UBERON:0005423!5.45e-13!605;UBERON:0000483!7.52e-13!309;UBERON:0000923!1.24e-12!604;UBERON:0005291!1.24e-12!604;UBERON:0006598!1.24e-12!604;UBERON:0002532!1.24e-12!604;UBERON:0001637!4.94e-11!42;UBERON:0003509!4.94e-11!42;UBERON:0004572!4.94e-11!42;UBERON:0007100!5.20e-11!27;UBERON:0002385!1.39e-09!63;UBERON:0001015!1.39e-09!63;UBERON:0000383!1.39e-09!63;UBERON:0000948!4.91e-09!24;UBERON:0005498!4.91e-09!24;UBERON:0004140!4.91e-09!24;UBERON:0009881!4.91e-09!24;UBERON:0004141!4.91e-09!24;UBERON:0003084!4.91e-09!24;UBERON:0007005!4.91e-09!24;UBERON:0004139!4.91e-09!24;UBERON:0004291!4.91e-09!24;UBERON:0001134!6.56e-09!61;UBERON:0002036!6.56e-09!61;UBERON:0003082!6.56e-09!61;UBERON:0000926!8.67e-09!448;UBERON:0004120!8.67e-09!448;UBERON:0006603!8.67e-09!448;UBERON:0004573!1.23e-08!33;UBERON:0004571!1.23e-08!33;UBERON:0000490!3.64e-08!138;UBERON:0001986!4.13e-08!18;UBERON:0004638!4.13e-08!18;UBERON:0004852!4.13e-08!18;UBERON:0002616!6.68e-08!59;UBERON:0004290!8.77e-08!70;UBERON:0001049!1.00e-07!57;UBERON:0005068!1.00e-07!57;UBERON:0006241!1.00e-07!57;UBERON:0007135!1.00e-07!57;UBERON:0003103!1.84e-07!69;UBERON:0000914!3.43e-07!83;UBERON:0002329!3.43e-07!83;UBERON:0003077!3.43e-07!83;UBERON:0003059!3.43e-07!83;UBERON:0007282!3.43e-07!83;UBERON:0009618!3.43e-07!83;UBERON:0007285!3.43e-07!83;UBERON:0001737!5.03e-07!9;UBERON:0000479!9.59e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.46e-10;25!UBERON:0001637;1.58e-09;42!UBERON:0003509;1.58e-09;42!UBERON:0004572;1.58e-09;42!UBERON:0000948;3.21e-08;22!UBERON:0004638;4.05e-08;18!UBERON:0001986;4.05e-08;18!UBERON:0004852;4.05e-08;18!UBERON:0004573;7.39e-08;33!UBERON:0004571;7.39e-08;33!UBERON:0001737;1.33e-07;9!UBERON:0001557;1.33e-07;9!UBERON:0007500;6.12e-07;56!UBERON:0001981;6.12e-07;56!UBERON:0004537;6.12e-07;56!UBERON:0000487;8.01e-07;22 | |||
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| ||
|short_description=p1@PDE3A | |short_description=p1@PDE3A | ||
}} | }} |
Latest revision as of 18:45, 17 September 2015
Short description: | p1@PDE3A |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PDE3A_5end |
Coexpression cluster: | C1012_heart_left_bile_Mast_epitheloid_aorta_umbilical |
Association with transcript: | -420bp_to_ENST00000542675_5end |
EntrezGene: | PDE3A |
HGNC: | 8778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 3.30e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.30e-08 | 18 |
muscle cell | 1.96e-07 | 55 |
muscle precursor cell | 3.32e-07 | 58 |
myoblast | 3.32e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.32e-07 | 58 |
endothelial cell of vascular tree | 5.48e-07 | 24 |