FFCP PHASE1:Hg19::chr16:67360712..67360752,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55282 | |EntrezGene=55282 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25615 | |HGNC=25615 | ||
|TSSclassifier=strong | |||
|UniProt=Q1X8D7 | |UniProt=Q1X8D7 | ||
|association_with_transcript=0bp_to_ENST00000329956,NM_018296,uc002esv.2,uc002esw.2_5end | |association_with_transcript=0bp_to_ENST00000329956,NM_018296,uc002esv.2,uc002esw.2_5end | ||
|cluster_id=chr16:67360712..67360752,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_1_at_LRRC36_5end | |description=CAGE_peak_1_at_LRRC36_5end | ||
|id=chr16:67360712..67360752,+ | |id=chr16:67360712..67360752,+ | ||
|ontology_enrichment_celltype=CL:0000163!5.23e-08!9 | |ontology_enrichment_celltype=CL:0000163!5.23e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000784;7.01e-33;3!CL:0002174;1.01e-11;1!CL:0000501;1.01e-11;1!CL:0000451;2.09e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,6.66e-33,3;CL:0002174,7.76e-12,1;CL:0000501,7.76e-12,1;CL:0000451,2.06e-09,10 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.01e-11;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!7.86e-11!86;UBERON:0007284!7.86e-11!86;UBERON:0002346!1.25e-10!90;UBERON:0007023!1.57e-10!115;UBERON:0001017!7.63e-10!82;UBERON:0005743!8.13e-10!86;UBERON:0001049!1.46e-09!57;UBERON:0005068!1.46e-09!57;UBERON:0006241!1.46e-09!57;UBERON:0007135!1.46e-09!57;UBERON:0000073!7.15e-09!94;UBERON:0001016!7.15e-09!94;UBERON:0000955!1.14e-08!69;UBERON:0006238!1.14e-08!69;UBERON:0003076!1.25e-07!15;UBERON:0003057!1.25e-07!15;UBERON:0004732!1.65e-07!13;UBERON:0002616!3.01e-07!59 | |ontology_enrichment_uberon=UBERON:0003075!7.86e-11!86;UBERON:0007284!7.86e-11!86;UBERON:0002346!1.25e-10!90;UBERON:0007023!1.57e-10!115;UBERON:0001017!7.63e-10!82;UBERON:0005743!8.13e-10!86;UBERON:0001049!1.46e-09!57;UBERON:0005068!1.46e-09!57;UBERON:0006241!1.46e-09!57;UBERON:0007135!1.46e-09!57;UBERON:0000073!7.15e-09!94;UBERON:0001016!7.15e-09!94;UBERON:0000955!1.14e-08!69;UBERON:0006238!1.14e-08!69;UBERON:0003076!1.25e-07!15;UBERON:0003057!1.25e-07!15;UBERON:0004732!1.65e-07!13;UBERON:0002616!3.01e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.01e-11;1!UBERON:0001785;1.01e-11;1!UBERON:0002464;1.01e-11;1!UBERON:0004904;1.01e-11;1!UBERON:0001021;1.01e-11;1!UBERON:0003296;2.49e-11;4!UBERON:0010133;2.49e-11;4!UBERON:0001894;7.63e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,6.26e-12,1;UBERON:0001785,6.26e-12,1;UBERON:0002464,6.26e-12,1;UBERON:0004904,6.26e-12,1;UBERON:0001021,6.26e-12,1;UBERON:0003902,6.26e-12,1;UBERON:0005425,6.26e-12,1;UBERON:0003296,3.78e-11,4;UBERON:0010133,3.78e-11,4;UBERON:0001894,9.65e-07,7;UBERON:0006222,9.65e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,6.15601654839249,0,0,0,0,0,9.30113434790834,6.86393892936153,8.54352253057999,0.198762407366705,0,0,0,0.419499436209906,0,0,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0.17859945656816,0.673588117878509,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.704387472105808,0,0.576479813667846,0.37872730027914,0,0.381988425558278,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0.308061348417659,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0,0.797131363644112,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09224469574562,0.557216921387392,0,0,0,0,0,0,0,0,0.422250816255987,0.19924798825107,0,4.28285671352269,0.20453736500431,0.123084805461069,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0.689486746482929,0,1.21537496453305,0,0.964771509003264,0,0.221158519862449,0.591095237907095,0.438770794307945,0,0,0,0,0,0,0.217294743844016,0,0,0,1.02193298195737,0,0,0,0.19606253431774,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0.150323419414493,0,0,0.330991955875499,0,1.19472429772959,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.225980740780532,0,0,0.253243183823515,0,0,0,0.19980960958213,0,0.114536596165916,0.857974989309823,0,0,0,0,0,0,0,0,0.136905378891993,0,1.28929632425987,0.262887354279314,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0.0846733320657845,1.59045937961861,0.408610218334727,0,0,0,0,0,0.182248669974074,0,0.236417121897595,0.629455057619977,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0.171086837884329,0,0,0,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0.244052529803926,0,0.573409195690071,0.221858103073705,0.434674820589684,0.276697269872462,0,0,0,0,0.468334905806882,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0.300515217994437,0,0,0,0,0,0,0,0,0,0,0.57785949122191,0.214441591374926,0,0,0.694567422971502,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0.327130788511688,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.449604575675217,0,0,0,0,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0.546974809018219,0,0,0,0,0,1.00885116665647,0,1.13831095675649,0.266107110487916,0,0,0.271878931907327,0,0.472775363535873,0,0,0.628462359664008,0,0,0.431855182437243,0,0.428859265059938,0.158013611732727,0.348724276104376,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.198950775161368,0.594600453887843,0,0.219881033490858,1.20770274853339,0,0,0,0.245148321753905,0,0,0.297046400327086,0.4226557275834,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,10.6847964487718,18.7574891109325,0,0.310298987585686,0.213233981900981,0,0.0645889098360061,0,0,0.0636471582781649,0,0,0,0.134704106029175,0,0,0,0.426909383510862,0,0,0,0.366724332548599,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,6.15601654839249,0,0,0,0,0,9.30113434790834,6.86393892936153,8.54352253057999,0.198762407366705,0,0,0,0.419499436209906,0,0,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0.17859945656816,0.673588117878509,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.704387472105808,0,0.576479813667846,0.37872730027914,0,0.381988425558278,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0.308061348417659,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0,0.797131363644112,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09224469574562,0.557216921387392,0,0,0,0,0,0,0,0,0.422250816255987,0.19924798825107,0,4.28285671352269,0.20453736500431,0.123084805461069,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0.689486746482929,0,1.21537496453305,0,0.964771509003264,0,0.221158519862449,0.591095237907095,0.438770794307945,0,0,0,0,0,0,0.217294743844016,0,0,0,1.02193298195737,0,0,0,0.19606253431774,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0.150323419414493,0,0,0.330991955875499,0,1.19472429772959,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.225980740780532,0,0,0.253243183823515,0,0,0,0.19980960958213,0,0.114536596165916,0.857974989309823,0,0,0,0,0,0,0,0,0.136905378891993,0,1.28929632425987,0.262887354279314,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0.0846733320657845,1.59045937961861,0.408610218334727,0,0,0,0,0,0.182248669974074,0,0.236417121897595,0.629455057619977,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0.171086837884329,0,0,0,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0.244052529803926,0,0.573409195690071,0.221858103073705,0.434674820589684,0.276697269872462,0,0,0,0,0.468334905806882,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0.300515217994437,0,0,0,0,0,0,0,0,0,0,0.57785949122191,0.214441591374926,0,0,0.694567422971502,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0.327130788511688,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.449604575675217,0,0,0,0,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0.546974809018219,0,0,0,0,0,1.00885116665647,0,1.13831095675649,0.266107110487916,0,0,0.271878931907327,0,0.472775363535873,0,0,0.628462359664008,0,0,0.431855182437243,0,0.428859265059938,0.158013611732727,0.348724276104376,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.198950775161368,0.594600453887843,0,0.219881033490858,1.20770274853339,0,0,0,0.245148321753905,0,0,0.297046400327086,0.4226557275834,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,10.6847964487718,18.7574891109325,0,0.310298987585686,0.213233981900981,0,0.0645889098360061,0,0,0.0636471582781649,0,0,0,0.134704106029175,0,0,0,0.426909383510862,0,0,0,0.366724332548599,0,0,0,0 | ||
|short_description=p1@LRRC36 | |short_description=p1@LRRC36 | ||
}} | }} |
Latest revision as of 10:32, 17 September 2015
Short description: | p1@LRRC36 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LRRC36_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000329956, NM_018296, uc002esv.2, uc002esw.2_5end |
EntrezGene: | LRRC36 |
HGNC: | 25615 |
UniProt: | Q1X8D7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 6.66e-33 | 3 |
follicular cell of ovary | 7.76e-12 | 1 |
granulosa cell | 7.76e-12 | 1 |
dendritic cell | 2.06e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 6.26e-12 | 1 |
cranial nerve | 6.26e-12 | 1 |
nerve trunk | 6.26e-12 | 1 |
nerve connecting eye with brain | 6.26e-12 | 1 |
nerve | 6.26e-12 | 1 |
retinal neural layer | 6.26e-12 | 1 |
presumptive neural retina | 6.26e-12 | 1 |
gland of diencephalon | 3.78e-11 | 4 |
neuroendocrine gland | 3.78e-11 | 4 |
diencephalon | 9.65e-07 | 7 |
future diencephalon | 9.65e-07 | 7 |