FFCP PHASE1:Hg19::chr17:71398206..71398248,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54549 | |EntrezGene=54549 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=19308 | |HGNC=19308 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=31bp_to_uc002jjt.3_5end | |association_with_transcript=31bp_to_uc002jjt.3_5end | ||
|cluster_id=chr17:71398206..71398248,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_2_at_SDK2_5end | |description=CAGE_peak_2_at_SDK2_5end | ||
|id=chr17:71398206..71398248,- | |id=chr17:71398206..71398248,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002032;1.03e-17;1!CL:0000557;1.03e-17;1!CL:0002535;1.12e-09;2!CL:0000123;1.57e-09;2!CL:0000242;1.57e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.12e-09,2;CL:0000242,1.33e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.57e-09;2!UBERON:0009117;1.02e-07;10!UBERON:0005564;1.02e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0006955;1.12e-09;2!UBERON:0004801;1.12e-09;2!UBERON:0000007;1.57e-09;2!UBERON:0001873;1.57e-09;2!UBERON:0000473;1.99e-09;8!UBERON:0003135;4.30e-07;11!UBERON:0001896;9.11e-07;3!UBERON:0005383;9.11e-07;3!UBERON:0005290;9.11e-07;3!UBERON:0005382;9.11e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.12e-09,2;UBERON:0004801,1.12e-09,2;UBERON:0000007,1.22e-09,2;UBERON:0001873,1.86e-09,2;UBERON:0010122,1.86e-09,2;UBERON:0000473,1.99e-09,8;UBERON:0003135,4.30e-07,11;UBERON:0001896,9.64e-07,3;UBERON:0005290,9.64e-07,3;UBERON:0010096,9.64e-07,3 | |||
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| ||
|short_description=p2@SDK2 | |short_description=p2@SDK2 | ||
}} | }} |
Latest revision as of 05:47, 17 September 2015
Short description: | p2@SDK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SDK2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 31bp_to_uc002jjt.3_5end |
EntrezGene: | SDK2 |
HGNC: | 19308 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.12e-09 | 2 |
Merkel cell | 1.33e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 1.12e-09 | 2 |
cervix epithelium | 1.12e-09 | 2 |
pituitary gland | 1.22e-09 | 2 |
caudate nucleus | 1.86e-09 | 2 |
future caudate nucleus | 1.86e-09 | 2 |
testis | 1.99e-09 | 8 |
male reproductive organ | 4.30e-07 | 11 |
medulla oblongata | 9.64e-07 | 3 |
myelencephalon | 9.64e-07 | 3 |
future myelencephalon | 9.64e-07 | 3 |