FFCP PHASE1:Hg19::chr2:198315897..198315903,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:198315897..198315903,+ | |||
|description=CAGE_peak_at_chr2:198315897..198315903,+ | |description=CAGE_peak_at_chr2:198315897..198315903,+ | ||
|id=chr2:198315897..198315903,+ | |id=chr2:198315897..198315903,+ | ||
|ontology_enrichment_celltype=CL:0002150!2.79e-07!3;CL:0000861!2.79e-07!3 | |ontology_enrichment_celltype=CL:0002150!2.79e-07!3;CL:0000861!2.79e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002127;1.78e-29;1!CL:0000911;1.78e-29;1!CL:0000814;1.78e-29;1!CL:0000182;6.79e-22;12!CL:0002253;1.78e-15;2!CL:0002563;2.11e-08;4 | |ontology_enrichment_celltype_v019=CL:0002127;1.78e-29;1!CL:0000911;1.78e-29;1!CL:0000814;1.78e-29;1!CL:0000182;6.79e-22;12!CL:0002253;1.78e-15;2!CL:0002563;2.11e-08;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002127,2.37e-29,1;CL:0000914,2.37e-29,1;CL:0000911,2.37e-29,1;CL:0000814,2.37e-29,1;CL:0002042,2.37e-29,1;CL:0002039,2.37e-29,1;CL:0002040,2.37e-29,1;CL:0002041,2.37e-29,1;CL:0000182,6.79e-22,12;CL:0002253,1.78e-15,2;CL:0000893,2.05e-15,2;CL:0002489,2.05e-15,2;CL:0000809,2.05e-15,2;CL:0000808,2.05e-15,2;CL:0000894,2.05e-15,2;CL:0000806,2.05e-15,2;CL:0000807,2.05e-15,2;CL:0000805,2.05e-15,2;CL:0002425,2.05e-15,2;CL:0002563,2.11e-08,4;CL:0000223,2.67e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.34e-24;11!UBERON:0003104;4.97e-23;31!UBERON:0009497;2.82e-20;13!CL:0002425;1.78e-15;2!UBERON:0001041;3.27e-09;30 | |ontology_enrichment_development_v019=UBERON:0004161;8.34e-24;11!UBERON:0003104;4.97e-23;31!UBERON:0009497;2.82e-20;13!CL:0002425;1.78e-15;2!UBERON:0001041;3.27e-09;30 | ||
|ontology_enrichment_disease=DOID:162!3.79e-18!235;DOID:14566!2.03e-17!239;DOID:0050687!5.40e-16!143;DOID:305!7.58e-13!106 | |ontology_enrichment_disease=DOID:162!3.79e-18!235;DOID:14566!2.03e-17!239;DOID:0050687!5.40e-16!143;DOID:305!7.58e-13!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:7,3.11e-07,39 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.96e-14;19!UBERON:0006925;3.96e-14;19!UBERON:0002423;6.47e-11;25!UBERON:0002365;3.27e-09;31!UBERON:0002330;3.27e-09;31!UBERON:0001052;2.11e-08;4!UBERON:0001242;2.11e-08;4!UBERON:0001262;2.11e-08;4!UBERON:0004786;2.11e-08;4!UBERON:0004808;2.11e-08;4!UBERON:0001277;2.11e-08;4!UBERON:0002368;2.09e-07;33!UBERON:0004907;5.70e-07;5!UBERON:0005172;5.76e-07;52!UBERON:0005173;5.76e-07;52 | |ontology_enrichment_uberon_v019=UBERON:0002107;3.96e-14;19!UBERON:0006925;3.96e-14;19!UBERON:0002423;6.47e-11;25!UBERON:0002365;3.27e-09;31!UBERON:0002330;3.27e-09;31!UBERON:0001052;2.11e-08;4!UBERON:0001242;2.11e-08;4!UBERON:0001262;2.11e-08;4!UBERON:0004786;2.11e-08;4!UBERON:0004808;2.11e-08;4!UBERON:0001277;2.11e-08;4!UBERON:0002368;2.09e-07;33!UBERON:0004907;5.70e-07;5!UBERON:0005172;5.76e-07;52!UBERON:0005173;5.76e-07;52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.96e-14,19;UBERON:0006925,3.96e-14,19;UBERON:0008836,3.96e-14,19;UBERON:0003929,1.96e-13,54;UBERON:0002368,1.99e-13,35;UBERON:0008835,2.64e-12,22;UBERON:0003894,2.64e-12,22;UBERON:0009854,8.40e-12,23;UBERON:0007499,6.47e-11,25;UBERON:0009497,6.47e-11,25;UBERON:0000015,6.47e-11,25;UBERON:0002423,6.47e-11,25;UBERON:0006235,6.47e-11,25;UBERON:0004161,6.47e-11,25;UBERON:0000949,1.48e-10,45;UBERON:0009856,1.60e-10,26;UBERON:0005911,5.90e-09,82;UBERON:0002365,6.17e-09,31;UBERON:0002330,6.17e-09,31;UBERON:0005172,7.27e-09,54;UBERON:0005173,7.27e-09,54;UBERON:0001052,2.11e-08,4;UBERON:0001242,2.11e-08,4;UBERON:0001262,2.11e-08,4;UBERON:0004786,2.11e-08,4;UBERON:0004808,2.11e-08,4;UBERON:0001277,2.11e-08,4;UBERON:0002370,2.26e-08,4;UBERON:0005058,2.26e-08,4;UBERON:0009113,2.26e-08,4;UBERON:0003295,2.26e-08,4;UBERON:0005562,2.26e-08,4;UBERON:0002530,3.70e-08,59;UBERON:0002417,5.07e-08,60;UBERON:0000916,5.07e-08,60;UBERON:0004907,5.70e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0.383829398097213,0,0,0,0,0.232401601740905,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.523916301990851,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0,0,0,0.142283686696828,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0.223676107892416,0,0.19538809540204,0,0,0,0.66614393599564,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0.333926115068718,0.16480387422676,0.211125408127993,0,0,0,0,0.246169610922139,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0.359030577639089,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0.317873157960757,0,0,1.13082457147153,0,0,0,0,0.593042257361244,0,0,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0,0,1.05226393590145,0,0,0,0.313932918407225,0,0.284609546029793,0,0.867798691675654,0,0.174118413160805,0,0.171986032471617,0.483781656445426,0.511625219603299,0.246346371159628,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,1.3393140992228,0.659326867049332,1.01105315781277,0,0.254019996197353,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0.211200673038813,0,0,0,0,0,0,0,0,0,0.492555124496034,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0.127894371303652,0,0.157265941855896,0.109209638192014,0.169732529954025,0,0.247871528518004,0,0,1.65609664502632,0,0,0,0,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0.707818340086442,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0.111231401892069,0,0,0.560544326627578,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0.335566295393377,0,0,0,0,0,0,0,0.596852325484105,0.356760272332706,0,0.109940516745429,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0.18378979906969,0.250707539292375,0.757786982182394,0.535928260312357,0,0,0,0,0,0.124149428591716,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0.383829398097213,0,0,0,0,0.232401601740905,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.523916301990851,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0,0,0,0.142283686696828,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0.223676107892416,0,0.19538809540204,0,0,0,0.66614393599564,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0.333926115068718,0.16480387422676,0.211125408127993,0,0,0,0,0.246169610922139,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0.359030577639089,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0.317873157960757,0,0,1.13082457147153,0,0,0,0,0.593042257361244,0,0,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0,0,1.05226393590145,0,0,0,0.313932918407225,0,0.284609546029793,0,0.867798691675654,0,0.174118413160805,0,0.171986032471617,0.483781656445426,0.511625219603299,0.246346371159628,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,1.3393140992228,0.659326867049332,1.01105315781277,0,0.254019996197353,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0.211200673038813,0,0,0,0,0,0,0,0,0,0.492555124496034,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0.127894371303652,0,0.157265941855896,0.109209638192014,0.169732529954025,0,0.247871528518004,0,0,1.65609664502632,0,0,0,0,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0.707818340086442,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0.111231401892069,0,0,0.560544326627578,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0.335566295393377,0,0,0,0,0,0,0,0.596852325484105,0.356760272332706,0,0.109940516745429,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0.18378979906969,0.250707539292375,0.757786982182394,0.535928260312357,0,0,0,0,0,0.124149428591716,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr2:198315897..198315903,+ | |short_description=p@chr2:198315897..198315903,+ | ||
}} | }} |
Latest revision as of 04:42, 29 July 2015
Short description: | p@chr2:198315897..198315903, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:198315897..198315903, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 2.37e-29 | 1 |
immature NK T cell | 2.37e-29 | 1 |
effector T cell | 2.37e-29 | 1 |
mature NK T cell | 2.37e-29 | 1 |
immature NK T cell stage IV | 2.37e-29 | 1 |
immature NK T cell stage I | 2.37e-29 | 1 |
immature NK T cell stage II | 2.37e-29 | 1 |
immature NK T cell stage III | 2.37e-29 | 1 |
hepatocyte | 6.79e-22 | 12 |
epithelial cell of large intestine | 1.78e-15 | 2 |
thymocyte | 2.05e-15 | 2 |
double negative thymocyte | 2.05e-15 | 2 |
double-positive, alpha-beta thymocyte | 2.05e-15 | 2 |
DN4 thymocyte | 2.05e-15 | 2 |
DN1 thymic pro-T cell | 2.05e-15 | 2 |
DN2 thymocyte | 2.05e-15 | 2 |
DN3 thymocyte | 2.05e-15 | 2 |
immature single positive thymocyte | 2.05e-15 | 2 |
early T lineage precursor | 2.05e-15 | 2 |
intestinal epithelial cell | 2.11e-08 | 4 |
endodermal cell | 2.67e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 3.11e-07 | 39 |