FFCP PHASE1:Hg19::chr1:27320382..27320395,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:27320382..27320395,+
|short_description=p2@TRNP1
|description=CAGE_peak_2_at_TRNP1_5end
|association_with_transcript=-414bp_to_ENST00000531285_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=388610 | |EntrezGene=388610 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34348 | |HGNC=34348 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-414bp_to_ENST00000531285_5end | |||
|cluster_id=chr1:27320382..27320395,+ | |||
|coexpression_cluster_id=C3963 | |||
|description=CAGE_peak_2_at_TRNP1_5end | |||
|id=chr1:27320382..27320395,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.91e-24!180;CL:0000057!1.19e-17!75;CL:0002321!4.58e-15!248;CL:0000220!1.00e-14!246;CL:0000222!5.94e-13!119;CL:0000183!1.80e-11!59;CL:0002620!1.51e-10!23;CL:0000680!4.88e-10!57;CL:0000056!4.88e-10!57;CL:0000355!4.88e-10!57;CL:1000449!1.03e-09!16;CL:0000187!1.73e-09!54;CL:1000497!3.33e-09!18;CL:0002518!3.33e-09!18;CL:0000393!3.35e-09!60;CL:0000211!3.35e-09!60;CL:0000066!2.59e-08!254;CL:0002681!4.83e-08!13;CL:0002584!4.83e-08!13;CL:1000507!5.23e-08!12;CL:1000494!5.23e-08!12;CL:0000192!4.81e-07!42;CL:0000514!4.81e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.79e-11;23!CL:1000449;8.28e-10;15!CL:1000497;7.85e-09;17!CL:0002518;7.85e-09;17!CL:0000057;1.93e-08;73!CL:0002681;5.13e-08;12!CL:0002584;5.13e-08;12!CL:1000507;1.29e-07;10!CL:1000494;1.29e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.16e-18,76;CL:0002321,7.03e-14,250;CL:0000222,2.60e-13,121;CL:0002620,4.47e-11,23;CL:0000680,7.91e-11,58;CL:0000056,7.91e-11,58;CL:0000355,7.91e-11,58;CL:0000187,3.06e-10,55;CL:1000449,8.71e-10,15;CL:0000393,1.07e-09,61;CL:0000211,1.07e-09,61;CL:1000497,8.75e-09,17;CL:0002518,8.75e-09,17;CL:0002681,5.34e-08,12;CL:0002584,5.34e-08,12;CL:0000192,1.27e-07,43;CL:0000514,1.27e-07,43;CL:1000507,1.34e-07,10;CL:1000494,1.34e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0006555;8.28e-10;15!UBERON:0004819;8.28e-10;15!UBERON:0001285;8.28e-10;15!UBERON:0007684;8.28e-10;15!UBERON:0003102;1.95e-08;50!UBERON:0002199;4.75e-08;46!UBERON:0002416;4.75e-08;46!UBERON:0002097;4.85e-08;41!UBERON:0001225;5.13e-08;12!UBERON:0008987;5.13e-08;12!UBERON:0000353;1.24e-07;15!UBERON:0004211;1.29e-07;10!UBERON:0009773;1.29e-07;10!UBERON:0001231;1.29e-07;10!UBERON:0004810;1.29e-07;10 | |||
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| ||
|short_description=p2@TRNP1 | |||
}} | }} |
Latest revision as of 07:09, 17 September 2015
Short description: | p2@TRNP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRNP1_5end |
Coexpression cluster: | C3963_Mesenchymal_Smooth_Fibroblast_Alveolar_Keratocytes_Hair_Renal |
Association with transcript: | -414bp_to_ENST00000531285_5end |
EntrezGene: | TRNP1 |
HGNC: | 34348 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.16e-18 | 76 |
embryonic cell | 7.03e-14 | 250 |
mesodermal cell | 2.60e-13 | 121 |
skin fibroblast | 4.47e-11 | 23 |
muscle precursor cell | 7.91e-11 | 58 |
myoblast | 7.91e-11 | 58 |
multi-potent skeletal muscle stem cell | 7.91e-11 | 58 |
muscle cell | 3.06e-10 | 55 |
epithelial cell of nephron | 8.71e-10 | 15 |
electrically responsive cell | 1.07e-09 | 61 |
electrically active cell | 1.07e-09 | 61 |
kidney cell | 8.75e-09 | 17 |
kidney epithelial cell | 8.75e-09 | 17 |
kidney cortical cell | 5.34e-08 | 12 |
renal cortical epithelial cell | 5.34e-08 | 12 |
smooth muscle cell | 1.27e-07 | 43 |
smooth muscle myoblast | 1.27e-07 | 43 |
kidney tubule cell | 1.34e-07 | 10 |
nephron tubule epithelial cell | 1.34e-07 | 10 |