FFCP PHASE1:Hg19::chr10:30994511..30994518,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:30994511..30994518,+ | |||
|description=CAGE_peak_at_chr10:30994511..30994518,+ | |description=CAGE_peak_at_chr10:30994511..30994518,+ | ||
|id=chr10:30994511..30994518,+ | |id=chr10:30994511..30994518,+ | ||
|ontology_enrichment_celltype=CL:0000838!2.50e-31!52;CL:0000542!1.29e-30!53;CL:0000051!1.29e-30!53;CL:0000945!5.97e-25!24;CL:0000826!5.97e-25!24;CL:0000738!2.42e-20!140;CL:0002087!9.09e-19!119;CL:0002031!4.98e-15!124;CL:0000037!5.90e-15!172;CL:0000566!5.90e-15!172;CL:0000988!1.15e-13!182;CL:0000236!1.82e-11!14;CL:0000898!3.04e-11!3;CL:0000784!7.32e-11!3;CL:0002032!1.49e-10!165;CL:0000837!1.49e-10!165;CL:0000624!1.32e-09!6;CL:0000791!2.82e-08!18;CL:0000789!2.82e-08!18;CL:0002420!2.82e-08!18;CL:0002419!2.82e-08!18;CL:0000790!2.82e-08!18;CL:0000815!5.67e-08!2;CL:0000792!5.67e-08!2;CL:0002677!5.67e-08!2;CL:0000084!3.03e-07!25;CL:0000827!3.03e-07!25 | |ontology_enrichment_celltype=CL:0000838!2.50e-31!52;CL:0000542!1.29e-30!53;CL:0000051!1.29e-30!53;CL:0000945!5.97e-25!24;CL:0000826!5.97e-25!24;CL:0000738!2.42e-20!140;CL:0002087!9.09e-19!119;CL:0002031!4.98e-15!124;CL:0000037!5.90e-15!172;CL:0000566!5.90e-15!172;CL:0000988!1.15e-13!182;CL:0000236!1.82e-11!14;CL:0000898!3.04e-11!3;CL:0000784!7.32e-11!3;CL:0002032!1.49e-10!165;CL:0000837!1.49e-10!165;CL:0000624!1.32e-09!6;CL:0000791!2.82e-08!18;CL:0000789!2.82e-08!18;CL:0002420!2.82e-08!18;CL:0002419!2.82e-08!18;CL:0000790!2.82e-08!18;CL:0000815!5.67e-08!2;CL:0000792!5.67e-08!2;CL:0002677!5.67e-08!2;CL:0000084!3.03e-07!25;CL:0000827!3.03e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000945;5.69e-21;24!CL:0000898;9.52e-20;3!CL:0000236;8.71e-18;13!CL:0000895;1.92e-15;1!CL:0000542;1.24e-14;53!CL:0000624;2.29e-10;6!CL:0000771;1.24e-08;2!CL:0000815;2.23e-08;2!CL:0000792;2.23e-08;2!CL:0002677;2.23e-08;2!CL:0000791;1.20e-07;18!CL:0000789;1.20e-07;18!CL:0002419;1.20e-07;18 | |ontology_enrichment_celltype_v019=CL:0000945;5.69e-21;24!CL:0000898;9.52e-20;3!CL:0000236;8.71e-18;13!CL:0000895;1.92e-15;1!CL:0000542;1.24e-14;53!CL:0000624;2.29e-10;6!CL:0000771;1.24e-08;2!CL:0000815;2.23e-08;2!CL:0000792;2.23e-08;2!CL:0002677;2.23e-08;2!CL:0000791;1.20e-07;18!CL:0000789;1.20e-07;18!CL:0002419;1.20e-07;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.71e-21,52;CL:0000945,4.77e-21,24;CL:0000826,4.77e-21,24;CL:0000542,9.61e-21,53;CL:0000051,9.61e-21,53;CL:0000898,9.53e-20,3;CL:0000236,1.53e-16,14;CL:0000810,2.75e-15,1;CL:0000895,2.75e-15,1;CL:0002436,2.75e-15,1;CL:0002427,2.75e-15,1;CL:0002428,2.75e-15,1;CL:0002429,2.75e-15,1;CL:0002433,2.75e-15,1;CL:0002431,2.75e-15,1;CL:0002432,2.75e-15,1;CL:0000738,2.07e-11,136;CL:0000624,2.29e-10,6;CL:0000037,5.14e-09,168;CL:0002087,5.30e-09,115;CL:0000771,1.20e-08,2;CL:0002031,1.37e-08,120;CL:0000988,1.70e-08,177;CL:0000815,1.86e-08,2;CL:0000792,1.86e-08,2;CL:0002677,1.86e-08,2;CL:0000893,2.67e-08,2;CL:0002489,2.67e-08,2;CL:0000809,2.67e-08,2;CL:0000808,2.67e-08,2;CL:0000894,2.67e-08,2;CL:0000806,2.67e-08,2;CL:0000807,2.67e-08,2;CL:0000805,2.67e-08,2;CL:0002425,2.67e-08,2;CL:0002032,1.03e-07,161;CL:0000837,1.03e-07,161;CL:0000791,1.25e-07,18;CL:0000789,1.25e-07,18;CL:0002420,1.25e-07,18;CL:0002419,1.25e-07,18;CL:0000790,1.25e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002427;1.92e-15;1!CL:0000051;1.24e-14;53!CL:0002425;2.23e-08;2!CL:0000790;1.20e-07;18 | |ontology_enrichment_development_v019=CL:0002427;1.92e-15;1!CL:0000051;1.24e-14;53!CL:0002425;2.23e-08;2!CL:0000790;1.20e-07;18 | ||
|ontology_enrichment_disease=DOID:0060058!4.46e-08!10 | |ontology_enrichment_disease=DOID:0060058!4.46e-08!10 | ||
|ontology_enrichment_disease_v019=DOID:4960;1.92e-15;1!DOID:0070004;1.92e-15;1 | |ontology_enrichment_disease_v019=DOID:4960;1.92e-15;1!DOID:0070004;1.92e-15;1 | ||
|ontology_enrichment_disease_v019_2=DOID:4960,1.54e-15,1;DOID:0070004,1.54e-15,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!5.78e-12!7;UBERON:0002370!7.78e-09!4;UBERON:0005058!7.78e-09!4;UBERON:0009113!7.78e-09!4;UBERON:0003295!7.78e-09!4;UBERON:0005562!7.78e-09!4 | |ontology_enrichment_uberon=UBERON:0004177!5.78e-12!7;UBERON:0002370!7.78e-09!4;UBERON:0005058!7.78e-09!4;UBERON:0009113!7.78e-09!4;UBERON:0003295!7.78e-09!4;UBERON:0005562!7.78e-09!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.92e-29;2!UBERON:0005058;1.92e-29;2!UBERON:0009113;1.92e-29;2!UBERON:0004177;2.12e-12;5!UBERON:0005057;2.12e-12;5 | |ontology_enrichment_uberon_v019=UBERON:0002370;1.92e-29;2!UBERON:0005058;1.92e-29;2!UBERON:0009113;1.92e-29;2!UBERON:0004177;2.12e-12;5!UBERON:0005057;2.12e-12;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.03e-32,4;UBERON:0005058,2.03e-32,4;UBERON:0009113,2.03e-32,4;UBERON:0003295,2.03e-32,4;UBERON:0005562,2.03e-32,4;UBERON:0003351,7.19e-22,6;UBERON:0004177,7.57e-19,7;UBERON:0005057,7.57e-19,7;UBERON:0000974,2.16e-13,10;UBERON:0003408,2.16e-13,10;UBERON:0001042,2.16e-13,10;UBERON:0009145,2.16e-13,10;UBERON:0006562,3.13e-12,11;UBERON:0009722,3.13e-12,11;UBERON:0007690,3.13e-12,11;UBERON:0008814,1.09e-07,18;UBERON:0001557,2.59e-07,19 | |||
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| ||
|short_description=p@chr10:30994511..30994518,+ | |short_description=p@chr10:30994511..30994518,+ | ||
}} | }} |
Latest revision as of 13:11, 23 July 2015
Short description: | p@chr10:30994511..30994518, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:30994511..30994518, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.03e-32 | 4 |
hemolymphoid system gland | 2.03e-32 | 4 |
thymic region | 2.03e-32 | 4 |
pharyngeal gland | 2.03e-32 | 4 |
thymus primordium | 2.03e-32 | 4 |
pharyngeal epithelium | 7.19e-22 | 6 |
hemopoietic organ | 7.57e-19 | 7 |
immune organ | 7.57e-19 | 7 |
neck | 2.16e-13 | 10 |
gland of gut | 2.16e-13 | 10 |
chordate pharynx | 2.16e-13 | 10 |
pharyngeal region of foregut | 2.16e-13 | 10 |
pharynx | 3.13e-12 | 11 |
entire pharyngeal arch endoderm | 3.13e-12 | 11 |
early pharyngeal endoderm | 3.13e-12 | 11 |
pharyngeal arch system | 1.09e-07 | 18 |
upper respiratory tract | 2.59e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.54e-15 | 1 |
myeloma | 1.54e-15 | 1 |