FFCP PHASE1:Hg19::chr1:55505258..55505275,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:55505258..55505275,+
|short_description=p2@PCSK9
|description=CAGE_peak_2_at_PCSK9_5end
|association_with_transcript=37bp_to_ENST00000302118_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=255738 | |EntrezGene=255738 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20001 | |HGNC=20001 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NBP7 | |UniProt=Q8NBP7 | ||
|association_with_transcript=37bp_to_ENST00000302118_5end | |||
|cluster_id=chr1:55505258..55505275,+ | |||
|description=CAGE_peak_2_at_PCSK9_5end | |||
|id=chr1:55505258..55505275,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.36e-16!254;CL:0000223!2.40e-10!59;CL:0002076!6.63e-09!43;CL:0002321!4.03e-08!248;CL:0000220!1.19e-07!246;CL:0002159!3.72e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002159;9.08e-13;14!CL:0002077;4.66e-10;34!CL:0002076;6.85e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.60e-23,253;CL:0002159,8.33e-13,14;CL:0000223,1.36e-11,58;CL:0002077,5.22e-11,34;CL:0002076,1.27e-08,42;CL:0002321,2.39e-08,250 | |||
|ontology_enrichment_development_v019=CL:0000223;3.35e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.78e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.66e-14!169;UBERON:0000925!1.66e-14!169;UBERON:0006595!1.66e-14!169;UBERON:0000064!1.87e-13!219;UBERON:0000063!3.82e-13!97;UBERON:0001007!1.22e-10!155;UBERON:0001555!1.22e-10!155;UBERON:0007026!1.22e-10!155;UBERON:0001737!1.40e-10!9;UBERON:0000481!2.11e-10!347;UBERON:0004921!5.05e-10!129;UBERON:0004185!5.05e-10!129;UBERON:0000119!2.84e-09!312;UBERON:0000483!1.27e-08!309;UBERON:0000475!2.74e-08!365;UBERON:0001041!3.50e-08!98;UBERON:0000077!3.55e-08!130;UBERON:0009854!4.71e-08!23;UBERON:0005911!7.16e-08!82;UBERON:0008835!9.32e-08!22;UBERON:0003894!9.32e-08!22;UBERON:0000468!9.77e-08!659;UBERON:0008947!1.18e-07!38;UBERON:0003258!1.18e-07!38;UBERON:0000922!1.23e-07!612;UBERON:0009569!1.39e-07!113;UBERON:0002200!2.17e-07!11;UBERON:0006876!2.17e-07!11;UBERON:0001048!2.54e-07!168;UBERON:0002107!2.96e-07!19;UBERON:0006925!2.96e-07!19;UBERON:0008836!2.96e-07!19;UBERON:0009856!3.08e-07!26;UBERON:0007499!6.03e-07!25;UBERON:0000466!6.27e-07!126;UBERON:0001801!6.80e-07!14;UBERON:0000065!7.68e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.60e-16;9!UBERON:0001557;2.60e-16;9!UBERON:0000072;1.04e-09;37!UBERON:0002107;1.84e-09;19!UBERON:0006925;1.84e-09;19!UBERON:0002423;6.74e-09;25!UBERON:0000065;7.33e-09;44!UBERON:0010371;2.73e-07;31!UBERON:0001801;7.72e-07;14!UBERON:0002365;9.56e-07;31!UBERON:0002330;9.56e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.57e-17,160;UBERON:0000925,3.57e-17,160;UBERON:0006595,3.57e-17,160;UBERON:0001737,2.61e-16,9;UBERON:0001041,8.61e-15,87;UBERON:0001007,2.03e-14,145;UBERON:0001555,2.03e-14,145;UBERON:0007026,2.03e-14,145;UBERON:0004921,4.91e-14,118;UBERON:0008835,1.40e-10,22;UBERON:0003894,1.40e-10,22;UBERON:0009854,5.91e-10,23;UBERON:0008947,5.97e-10,38;UBERON:0003258,5.97e-10,38;UBERON:0001048,1.66e-09,160;UBERON:0002107,1.76e-09,19;UBERON:0006925,1.76e-09,19;UBERON:0008836,1.76e-09,19;UBERON:0009569,2.84e-09,112;UBERON:0005911,3.37e-09,82;UBERON:0007499,7.32e-09,25;UBERON:0009497,7.32e-09,25;UBERON:0000015,7.32e-09,25;UBERON:0002423,7.32e-09,25;UBERON:0006235,7.32e-09,25;UBERON:0004161,7.32e-09,25;UBERON:0009856,2.21e-08,26;UBERON:0000072,6.25e-08,47;UBERON:0000065,7.12e-08,54;UBERON:0001004,7.98e-08,74;UBERON:0001557,1.27e-07,19;UBERON:0003929,4.41e-07,54;UBERON:0002417,6.80e-07,60;UBERON:0000916,6.80e-07,60;UBERON:0002365,9.06e-07,31;UBERON:0002330,9.06e-07,31 | |||
|phase1_expression=2.36181893051724,0.856402095563933,1.9733616573436,2.00146596706261,0,0,0,0,0.261185628199839,0.245733936501509,5.58240934377942,5.02415155899396,5.80287352102598,0,0,0,0,0,0,0.492484232307152,1.63200552995402,0.313454721478088,0,0.547497700291537,0.251085279189606,0,0,0,0,0,0,6.43594857135249,12.3494426699083,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,1.13441780596881,1.10864698731282,1.31752178539689,0.0654895377488563,13.8432209551166,11.4943177263173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,7.41359888642308,0,0.12663051166458,0.132409180813219,2.0078563452417,0,1.12135520028461,0,0,0,0,0,0.908144565869588,0.576175924479999,3.28050004567315,0,0,0,4.11020745253177,3.56120477609889,3.08991774744947,0,0.245668634623536,0,0,0,3.64064544775211,2.87447256726495,0.168336113954066,0.125118519871964,0,0,0,0.901428353439581,0,0.179389635688862,0,0,0,0,0,0,0.506328996723799,0,0,0,0.161646056818812,0,0,0,16.8136942252068,9.27336810008838,13.7666205786722,0.365921118388786,1.85541675650079,1.04574548582567,1.0366105501537,1.7662459561294,1.45990943630332,0,0,0,0,2.88751792667834,27.5654844092836,26.6363810323401,31.5724449147361,26.029377564845,25.4918949588115,23.7270619111097,25.6179485504312,26.097454861671,31.1645197126576,0,0,1.2347220339942,1.47008711385542,10.1404027857465,6.87979051674338,23.0408063605748,0,3.07471096357784,0.857839051492628,10.2067765430022,6.74410519545717,12.7671794962771,3.70353780634118,0.651616610620649,3.11980435583874,0,0.463721619900307,1.05667824812239,0,0,0,0,0,0,0,0,11.2480600784132,6.04735661515894,7.3723050566041,0,0.290633938513962,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0.336393253036082,0.87192013766656,0.51336800074665,0,3.57656445851882,0.845302752556,0.531876233169741,0,0.514414748524284,0,0.532844358032199,1.14382394926518,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0.391602314925481,1.37257369524342,0,0,0,0.303127571446259,0,3.93107381328584,2.48107807818777,3.37616341233737,1.68396056659844,2.56278298511402,1.02341449813341,1.44768529029247,5.93672265779964,0,0,0,0,0,5.68039413080624,1.60405176242628,0.276242966807689,0,0.182091168006717,0,2.25599806453706,0.231046011313244,0.784349769176855,0,0.105551628892876,0,0,0,0,1.08378575017541,2.00675909541941,2.29388645740534,6.64860807142979,0.895499018888713,0,0,0.256450125116389,1.96808787419823,0,1.03041011647722,0,0,4.59412430396938,12.3511446746939,0,0,0.154048617114644,0,0.689182862422653,0.966782203814463,1.45016693914229,0.681813019328807,0.178064071293475,0.991709492165869,0.768760269460425,3.57315594984836,0.10115778085555,0,0.31481234683064,0,0,0,0,0.18532421910392,0,1.48863347743867,1.58189712359363,0.762520775695299,2.303080121802,0.42793898803392,0,0.78494864019923,1.97859703341646,12.0796293083864,7.89343095716099,0.202182481573316,0,0,6.82687234725426,0,0,0,0.707027159768564,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0.196498082026242,0,0,0.633322905892992,0,1.13841952129715,9.79817216685952,5.00354986172663,6.03272047982209,6.53345909167936,0.564862804660675,1.29151611801369,3.36942951335251,3.10401107475673,0.918893600827838,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.811367035427949,0,0,56.8907242840988,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,17.6352923497993,0,0,0,3.32512899245109,1.07412704805365,0,0,0,0,0.969332746095218,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.241192877250816,0,0.884634079449797,0.295547618953547,0.219385397153973,3.59496929612668,0.139423744278603,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0,0,0.902382642468723,0.392125068635479,0.839107934879214,0.948768663620925,0.317873157960757,0,0,0.989471500037586,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,7.64340699832146,4.52707874218093,0,0.171986032471617,15.964794662699,12.9368091242548,14.7807822695777,0.193978032976839,0,0,0,0,0,0,0,0,7.59276516412095,2.16135625731159,0,0,2.0167671718341,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,5.82479747637269,9.29641551225239,8.40641755487898,9.77351385885681,0.590564889088493,0,0,0,5.94786649320571,3.85110422472255,3.32352270423348,0.2249738915515,4.6428117273477,0,0.335434687599266,0,0,0,0,11.7068270364862,0,0,0,0,0,0,0,0,0.170388021785422,0.226624183040251,2.78449243988357,13.2506888912221,0.258565912723101,0.13223260174269,0.513260513652988,1.40963004463334,1.49502377594773,0.314408610199332,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0.934853239388898,0,0.189403005275089,0,0,0,0.151230923763239,0.310874401165561,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0.322231671127465,0,0,0.40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| ||
|short_description=p2@PCSK9 | |||
}} | }} |
Latest revision as of 15:27, 18 September 2015
Short description: | p2@PCSK9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PCSK9_5end |
Coexpression cluster: | NA |
Association with transcript: | 37bp_to_ENST00000302118_5end |
EntrezGene: | PCSK9 |
HGNC: | 20001 |
UniProt: | Q8NBP7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.60e-23 | 253 |
general ecto-epithelial cell | 8.33e-13 | 14 |
endodermal cell | 1.36e-11 | 58 |
ecto-epithelial cell | 5.22e-11 | 34 |
endo-epithelial cell | 1.27e-08 | 42 |
embryonic cell | 2.39e-08 | 250 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.78e-07 | 106 |