FFCP PHASE1:Hg19::chr12:52629037..52629072,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:52629037..52629072,+ | |||
|coexpression_cluster_id=C689 | |coexpression_cluster_id=C689 | ||
|description=CAGE_peak_at_chr12:52629037..52629072,+ | |description=CAGE_peak_at_chr12:52629037..52629072,+ | ||
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|ontology_enrichment_celltype=CL:0000066!9.87e-44!254;CL:0000076!1.37e-13!62;CL:0000077!9.09e-13!19;CL:0000063!3.72e-12!578;CL:0002368!9.48e-11!13;CL:0000213!1.77e-10!57;CL:0000215!1.77e-10!57;CL:0002076!3.58e-10!43;CL:0002202!8.74e-08!9;CL:0002632!8.74e-08!9;CL:1000413!1.44e-07!9;CL:0000223!6.99e-07!59 | |ontology_enrichment_celltype=CL:0000066!9.87e-44!254;CL:0000076!1.37e-13!62;CL:0000077!9.09e-13!19;CL:0000063!3.72e-12!578;CL:0002368!9.48e-11!13;CL:0000213!1.77e-10!57;CL:0000215!1.77e-10!57;CL:0002076!3.58e-10!43;CL:0002202!8.74e-08!9;CL:0002632!8.74e-08!9;CL:1000413!1.44e-07!9;CL:0000223!6.99e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000077;3.19e-20;19!CL:0002368;2.46e-13;13!CL:0002202;1.94e-10;9!CL:0002632;1.94e-10;9!CL:0002076;1.78e-09;42!CL:0002328;4.44e-07;3!CL:0000076;4.47e-07;63 | |ontology_enrichment_celltype_v019=CL:0000077;3.19e-20;19!CL:0002368;2.46e-13;13!CL:0002202;1.94e-10;9!CL:0002632;1.94e-10;9!CL:0002076;1.78e-09;42!CL:0002328;4.44e-07;3!CL:0000076;4.47e-07;63 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.71e-37,253;CL:0000077,2.69e-20,19;CL:0002076,1.69e-14,42;CL:0002368,2.03e-13,13;CL:0000076,2.85e-13,63;CL:0002202,1.81e-10,9;CL:0002632,1.81e-10,9;CL:0000213,2.54e-09,58;CL:0000215,2.54e-09,58;CL:0000223,6.56e-09,58;CL:0002328,4.12e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.53e-08;29 | |ontology_enrichment_development_v019=UBERON:0008947;3.53e-08;29 | ||
|ontology_enrichment_disease=DOID:305!1.24e-12!106;DOID:0050687!1.02e-08!143 | |ontology_enrichment_disease=DOID:305!1.24e-12!106;DOID:0050687!1.02e-08!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,2.12e-12,106;DOID:0050687,1.06e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0000065!2.83e-14!53;UBERON:0008947!1.40e-13!38;UBERON:0003258!1.40e-13!38;UBERON:0001048!5.76e-13!168;UBERON:0001004!2.46e-12!72;UBERON:0004119!7.19e-12!169;UBERON:0000925!7.19e-12!169;UBERON:0006595!7.19e-12!169;UBERON:0000072!1.77e-11!46;UBERON:0000077!2.85e-11!130;UBERON:0000464!5.91e-11!104;UBERON:0001737!5.81e-10!9;UBERON:0001041!6.36e-10!98;UBERON:0000466!3.00e-09!126;UBERON:0001007!3.12e-08!155;UBERON:0001555!3.12e-08!155;UBERON:0007026!3.12e-08!155;UBERON:0005153!4.32e-08!37;UBERON:0004921!8.16e-08!129;UBERON:0004185!8.16e-08!129;UBERON:0003915!1.44e-07!9;UBERON:0004700!1.44e-07!9;UBERON:0001917!1.44e-07!9;UBERON:0000487!1.90e-07!22;UBERON:0005631!3.60e-07!14;UBERON:0000158!3.60e-07!14;UBERON:0005911!3.67e-07!82;UBERON:0000063!5.67e-07!97;UBERON:0000058!6.15e-07!26;UBERON:0001557!9.40e-07!19 | |ontology_enrichment_uberon=UBERON:0000065!2.83e-14!53;UBERON:0008947!1.40e-13!38;UBERON:0003258!1.40e-13!38;UBERON:0001048!5.76e-13!168;UBERON:0001004!2.46e-12!72;UBERON:0004119!7.19e-12!169;UBERON:0000925!7.19e-12!169;UBERON:0006595!7.19e-12!169;UBERON:0000072!1.77e-11!46;UBERON:0000077!2.85e-11!130;UBERON:0000464!5.91e-11!104;UBERON:0001737!5.81e-10!9;UBERON:0001041!6.36e-10!98;UBERON:0000466!3.00e-09!126;UBERON:0001007!3.12e-08!155;UBERON:0001555!3.12e-08!155;UBERON:0007026!3.12e-08!155;UBERON:0005153!4.32e-08!37;UBERON:0004921!8.16e-08!129;UBERON:0004185!8.16e-08!129;UBERON:0003915!1.44e-07!9;UBERON:0004700!1.44e-07!9;UBERON:0001917!1.44e-07!9;UBERON:0000487!1.90e-07!22;UBERON:0005631!3.60e-07!14;UBERON:0000158!3.60e-07!14;UBERON:0005911!3.67e-07!82;UBERON:0000063!5.67e-07!97;UBERON:0000058!6.15e-07!26;UBERON:0001557!9.40e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.97e-16;9!UBERON:0001557;2.97e-16;9!UBERON:0000072;4.06e-12;37!UBERON:0000065;4.57e-12;44!UBERON:0004815;4.44e-07;3!UBERON:0002031;4.44e-07;3!UBERON:0001004;5.87e-07;65 | |ontology_enrichment_uberon_v019=UBERON:0001737;2.97e-16;9!UBERON:0001557;2.97e-16;9!UBERON:0000072;4.06e-12;37!UBERON:0000065;4.57e-12;44!UBERON:0004815;4.44e-07;3!UBERON:0002031;4.44e-07;3!UBERON:0001004;5.87e-07;65 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.68e-16,9;UBERON:0008947,1.10e-13,38;UBERON:0003258,1.10e-13,38;UBERON:0000065,9.32e-13,54;UBERON:0004119,5.22e-12,160;UBERON:0000925,5.22e-12,160;UBERON:0006595,5.22e-12,160;UBERON:0001004,1.94e-11,74;UBERON:0000072,1.99e-11,47;UBERON:0001041,2.65e-11,87;UBERON:0001048,4.97e-11,160;UBERON:0001007,5.68e-09,145;UBERON:0001555,5.68e-09,145;UBERON:0007026,5.68e-09,145;UBERON:0001557,2.48e-08,19;UBERON:0004921,2.89e-08,118;UBERON:0005631,3.09e-07,14;UBERON:0000158,3.09e-07,14;UBERON:0004815,4.12e-07,3;UBERON:0002031,4.12e-07,3 | |||
|phase1_expression=0.181678379270557,1.07050261945492,0,0,0,0,0,0,0,4.17747692052565,85.8295436606086,2.18441372130172,5.80287352102598,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,10.1136334692682,5.4217065380085,4.80680213216824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88300474649071,0,0.486634870302636,0.0945348171640679,4.21285855178871,2.10803485663503,0.130979075497713,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0.347140501607594,2.82653970962005,2.09749718104953,5.77747888074142,0.626984899610432,0.258416759169329,0,0,1.20848795132744,0.760272105718513,0.24406205754817,0.367663080345869,15.3926970097534,0,0,0,0,0,0.366403487860815,0,0,1.74437620857014,0.993943903390637,0.12663051166458,0,0,1.06400514659507,1.12135520028461,2.1349799145941,1.48000529050296,0,0.404132016209064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0.213557388818567,0,0.600182192168805,0,0,0,0.337552664482532,0.876933046450788,0.252433774244115,0,0,0,0,0.508681776931463,2.31913023795956,0,0.286804595389004,0,0,0.116193942869518,0,0,0,0,1.92972281457866,0,0,0,3.31259040111563,6.74338760312407,4.09718750801919,4.08087699109858,4.13970943775572,3.08451804844426,2.29213223872279,1.76599318612811,4.23221872641029,0,0,0.8231480226628,0,0,0,0,0,0,0.514703430895577,1.20725313949488,3.37205259772859,0,0,0,0,1.44331342025273,0,1.29149563659404,0,0.462985512576611,0,0,0,0,0,0,0,0,0.141775097242386,0.895585227028483,1.74380363108377,4.21720947081732,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41151501647669,0,15.695759615583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53550464602372,0.892144943985809,0.630809660135739,0.117141414992713,0,0,0,0,0.368738337083406,0,0,0,0,0,0,1.5156378572313,0,5.74541557326393,0.248107807818777,0.460385919864187,1.40330047216537,0.256278298511402,0,1.44768529029247,4.45254199334973,0,0,0,0,0.116210378459959,0,16.2410240945661,3.03867263488458,0.229628896329213,0,0,1.80479845162965,0.616122696835318,0,1.46139224653261,0.105551628892876,0,0,0.647747748306418,0,0,0,1.01950509218015,4.98645605357235,0.447749509444357,0,0,0.512900250232778,4.26419039409617,0.976135183992909,0.309123034943167,0,0,0,0.650060246036521,1.6068392984416,0,0,0,0,0,0,0,0,1.32227932288782,6.1500821556834,0.510450849978337,1.8208400553999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.577332676353072,3.35151137767894,16.3336477291984,0.188287601553558,1.29151611801369,10.1082885400575,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,1.96032172784825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,1.19372242368845,0.593929361665277,0.614321404198464,0,0,0,0,1.68900326502395,0,0,0,0,0,0,3.14539229015644,2.14825409610731,0,0.197286811273867,0,0,0,0,0,0,0.349839999984783,0,0,2.54253650292766,3.78220290828698,0,0,0,0,0,0,0,0,0,0.871507708151921,0,0.0769502585037971,0.113942055847001,0,1.16684937732704,0.108647371922008,1.5950057986596,2.28993983504656,26.1187040249131,0,0,0,0,0,0,0,0,0,0.979396848954886,0,0,0,0,0,0,0,0,0,0,0,0,0.782658475728359,0,0.789168805698781,0,0,0,0,0,0,0.661983911750998,0.627865836814451,0,0.284609546029793,0,3.29763502836749,0,0.870592065804026,0,0,1.45134496933628,1.16942907337897,1.72442459811739,0,0,0.677942222341597,0,0,0,12.906391260497,0.400794101257669,0.426905989478705,9.99048047910651,1.00863292007874,0,0,0.14405479798815,0,4.47818665771911,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0.157611414598396,0,0,0,1.34340638123612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684347351537318,0,0.640724475406168,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.477890301491107,0,0.155262956876259,0,0,0.521745061811734,0.150257608997218,1.14241563650639,2.84809513243263,0,0.644463342254931,0,0.398095888698616,0,0.343395705182793,0.336749488765919,0,0,2.57329909649911,2.87093721161733,31.0587117951813,7.40871917836269,7.09736443068756,8.23808668974842,5.24962460173653,8.77136198314828,0.176689145945881,11.381928257984,2.87202149110224,0,1.0362910251936,4.25403938648335,0,0,0,0,0,2.21195617878347,1.47918486351039,0,0,0,0,0,0.559518030877778,1.86623178009892,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.855745298223,0,0,0,0,0,0,0.261906694481422,4.9131575253029,3.99211432786022,0,0,0,0,0,2.19303106742873,0,0,0,0,0,0,0,0.532214220975833,0,0,0,0,1.77290761325952,0.333694205676207,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.828864656652147,0,0,2.15113679410139,0,0,2.54032230114557,6.64409918777745,0,1.91107787795487,1.90154234056247,1.27595303699816,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0.940634592723046,0,0.942706188406504,0,0,0,2.0391253762538,0,0,0,0,0,0.8826550335808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| ||
|short_description=p@chr12:52629037..52629072,+ | |short_description=p@chr12:52629037..52629072,+ | ||
}} | }} |
Latest revision as of 09:30, 24 July 2015
Short description: | p@chr12:52629037..52629072, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52629037..52629072, + |
Coexpression cluster: | C689_Alveolar_mesothelioma_Retinal_Mesothelial_Prostate_bile_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.71e-37 | 253 |
mesothelial cell | 2.69e-20 | 19 |
endo-epithelial cell | 1.69e-14 | 42 |
respiratory epithelial cell | 2.03e-13 | 13 |
squamous epithelial cell | 2.85e-13 | 63 |
epithelial cell of tracheobronchial tree | 1.81e-10 | 9 |
epithelial cell of lower respiratory tract | 1.81e-10 | 9 |
lining cell | 2.54e-09 | 58 |
barrier cell | 2.54e-09 | 58 |
endodermal cell | 6.56e-09 | 58 |
bronchial epithelial cell | 4.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.68e-16 | 9 |
respiratory primordium | 1.10e-13 | 38 |
endoderm of foregut | 1.10e-13 | 38 |
respiratory tract | 9.32e-13 | 54 |
endoderm-derived structure | 5.22e-12 | 160 |
endoderm | 5.22e-12 | 160 |
presumptive endoderm | 5.22e-12 | 160 |
respiratory system | 1.94e-11 | 74 |
segment of respiratory tract | 1.99e-11 | 47 |
foregut | 2.65e-11 | 87 |
primordium | 4.97e-11 | 160 |
digestive system | 5.68e-09 | 145 |
digestive tract | 5.68e-09 | 145 |
primitive gut | 5.68e-09 | 145 |
upper respiratory tract | 2.48e-08 | 19 |
subdivision of digestive tract | 2.89e-08 | 118 |
extraembryonic membrane | 3.09e-07 | 14 |
membranous layer | 3.09e-07 | 14 |
lower respiratory tract epithelium | 4.12e-07 | 3 |
epithelium of bronchus | 4.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.12e-12 | 106 |
cell type cancer | 1.06e-08 | 143 |