FFCP PHASE1:Hg19::chr6:28367510..28367537,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9753 | |EntrezGene=9753 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13172 | |HGNC=13172 | ||
|TSSclassifier=strong | |||
|UniProt=O43309 | |UniProt=O43309 | ||
|association_with_transcript=0bp_to_ENST00000361028_5end | |association_with_transcript=0bp_to_ENST00000361028_5end | ||
|cluster_id=chr6:28367510..28367537,- | |||
|description=CAGE_peak_1_at_ZSCAN12_5end | |description=CAGE_peak_1_at_ZSCAN12_5end | ||
|id=chr6:28367510..28367537,- | |id=chr6:28367510..28367537,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.67e-13!115;UBERON:0001017!6.09e-13!82;UBERON:0005743!1.62e-12!86;UBERON:0000073!1.13e-11!94;UBERON:0001016!1.13e-11!94;UBERON:0000955!2.62e-11!69;UBERON:0006238!2.62e-11!69;UBERON:0002780!1.12e-09!41;UBERON:0001890!1.12e-09!41;UBERON:0006240!1.12e-09!41;UBERON:0003080!1.54e-09!42;UBERON:0002616!2.32e-09!59;UBERON:0001049!2.44e-09!57;UBERON:0005068!2.44e-09!57;UBERON:0006241!2.44e-09!57;UBERON:0007135!2.44e-09!57;UBERON:0001893!4.47e-08!34;UBERON:0002020!6.68e-08!34;UBERON:0003528!6.68e-08!34;UBERON:0001869!7.16e-08!32;UBERON:0002791!8.97e-08!33;UBERON:0003075!2.22e-07!86;UBERON:0007284!2.22e-07!86;UBERON:0000153!2.84e-07!129;UBERON:0007811!2.84e-07!129;UBERON:0004121!4.26e-07!169 | |ontology_enrichment_uberon=UBERON:0007023!3.67e-13!115;UBERON:0001017!6.09e-13!82;UBERON:0005743!1.62e-12!86;UBERON:0000073!1.13e-11!94;UBERON:0001016!1.13e-11!94;UBERON:0000955!2.62e-11!69;UBERON:0006238!2.62e-11!69;UBERON:0002780!1.12e-09!41;UBERON:0001890!1.12e-09!41;UBERON:0006240!1.12e-09!41;UBERON:0003080!1.54e-09!42;UBERON:0002616!2.32e-09!59;UBERON:0001049!2.44e-09!57;UBERON:0005068!2.44e-09!57;UBERON:0006241!2.44e-09!57;UBERON:0007135!2.44e-09!57;UBERON:0001893!4.47e-08!34;UBERON:0002020!6.68e-08!34;UBERON:0003528!6.68e-08!34;UBERON:0001869!7.16e-08!32;UBERON:0002791!8.97e-08!33;UBERON:0003075!2.22e-07!86;UBERON:0007284!2.22e-07!86;UBERON:0000153!2.84e-07!129;UBERON:0007811!2.84e-07!129;UBERON:0004121!4.26e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;8.50e-08;41!UBERON:0001890;8.50e-08;41!UBERON:0001869;1.23e-07;32!UBERON:0002791;1.65e-07;32!UBERON:0001893;2.32e-07;34!UBERON:0003528;4.24e-07;34!UBERON:0002020;4.24e-07;34 | |ontology_enrichment_uberon_v019=UBERON:0002780;8.50e-08;41!UBERON:0001890;8.50e-08;41!UBERON:0001869;1.23e-07;32!UBERON:0002791;1.65e-07;32!UBERON:0001893;2.32e-07;34!UBERON:0003528;4.24e-07;34!UBERON:0002020;4.24e-07;34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.99e-13,81;UBERON:0007023,1.22e-12,114;UBERON:0001016,9.95e-12,89;UBERON:0000955,2.24e-11,68;UBERON:0006238,2.24e-11,68;UBERON:0002780,1.17e-09,41;UBERON:0001890,1.17e-09,41;UBERON:0003080,1.17e-09,41;UBERON:0006240,1.17e-09,41;UBERON:0000073,1.63e-09,53;UBERON:0002616,1.63e-09,53;UBERON:0001049,2.65e-09,56;UBERON:0005068,2.65e-09,56;UBERON:0006241,2.65e-09,56;UBERON:0007135,2.65e-09,56;UBERON:0011216,8.58e-09,223;UBERON:0001893,4.89e-08,34;UBERON:0003528,7.32e-08,34;UBERON:0002020,7.32e-08,34;UBERON:0001869,7.91e-08,32;UBERON:0002791,1.48e-07,32;UBERON:0003075,3.81e-07,82;UBERON:0007284,3.81e-07,82;UBERON:0003056,6.96e-07,61 | |||
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| ||
|short_description=p1@ZSCAN12 | |short_description=p1@ZSCAN12 | ||
}} | }} |
Latest revision as of 12:25, 17 September 2015
Short description: | p1@ZSCAN12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZSCAN12_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000361028_5end |
EntrezGene: | ZSCAN12 |
HGNC: | 13172 |
UniProt: | O43309 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.99e-13 | 81 |
adult organism | 1.22e-12 | 114 |
nervous system | 9.95e-12 | 89 |
brain | 2.24e-11 | 68 |
future brain | 2.24e-11 | 68 |
regional part of forebrain | 1.17e-09 | 41 |
forebrain | 1.17e-09 | 41 |
anterior neural tube | 1.17e-09 | 41 |
future forebrain | 1.17e-09 | 41 |
regional part of nervous system | 1.63e-09 | 53 |
regional part of brain | 1.63e-09 | 53 |
neural tube | 2.65e-09 | 56 |
neural rod | 2.65e-09 | 56 |
future spinal cord | 2.65e-09 | 56 |
neural keel | 2.65e-09 | 56 |
organ system subdivision | 8.58e-09 | 223 |
telencephalon | 4.89e-08 | 34 |
brain grey matter | 7.32e-08 | 34 |
gray matter | 7.32e-08 | 34 |
cerebral hemisphere | 7.91e-08 | 32 |
regional part of telencephalon | 1.48e-07 | 32 |
neural plate | 3.81e-07 | 82 |
presumptive neural plate | 3.81e-07 | 82 |
pre-chordal neural plate | 6.96e-07 | 61 |