FFCP PHASE1:Hg19::chr3:149260370..149260390,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25937 | |EntrezGene=25937 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24042 | |HGNC=24042 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-144bp_to_ENST00000485244_5end | |association_with_transcript=-144bp_to_ENST00000485244_5end | ||
|cluster_id=chr3:149260370..149260390,- | |||
|coexpression_cluster_id=C1922 | |coexpression_cluster_id=C1922 | ||
|description=CAGE_peak_21_at_WWTR1_5end | |description=CAGE_peak_21_at_WWTR1_5end | ||
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|ontology_enrichment_celltype=CL:1000497!1.72e-23!18;CL:0002518!1.72e-23!18;CL:1000449!7.95e-19!16;CL:1000507!2.95e-17!12;CL:1000494!2.95e-17!12;CL:0002078!4.25e-17!44;CL:0002681!7.57e-16!13;CL:0002584!7.57e-16!13;CL:0002139!1.05e-15!24;CL:0000066!5.26e-14!254;CL:0000115!1.75e-13!35;CL:0000213!2.58e-13!57;CL:0000215!2.58e-13!57;CL:0002543!3.46e-11!6;CL:0000071!2.37e-10!18;CL:0002546!2.37e-10!18;CL:0000222!9.67e-10!119;CL:0000239!2.02e-09!3;CL:1000615!2.02e-09!3;CL:0002306!2.02e-09!3;CL:0002618!6.80e-09!3;CL:0000220!1.59e-07!246;CL:0002321!2.17e-07!248;CL:0005020!2.98e-07!6;CL:0002138!2.98e-07!6;CL:0005022!2.98e-07!6 | |ontology_enrichment_celltype=CL:1000497!1.72e-23!18;CL:0002518!1.72e-23!18;CL:1000449!7.95e-19!16;CL:1000507!2.95e-17!12;CL:1000494!2.95e-17!12;CL:0002078!4.25e-17!44;CL:0002681!7.57e-16!13;CL:0002584!7.57e-16!13;CL:0002139!1.05e-15!24;CL:0000066!5.26e-14!254;CL:0000115!1.75e-13!35;CL:0000213!2.58e-13!57;CL:0000215!2.58e-13!57;CL:0002543!3.46e-11!6;CL:0000071!2.37e-10!18;CL:0002546!2.37e-10!18;CL:0000222!9.67e-10!119;CL:0000239!2.02e-09!3;CL:1000615!2.02e-09!3;CL:0002306!2.02e-09!3;CL:0002618!6.80e-09!3;CL:0000220!1.59e-07!246;CL:0002321!2.17e-07!248;CL:0005020!2.98e-07!6;CL:0002138!2.98e-07!6;CL:0005022!2.98e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:1000497;5.85e-31;17!CL:0002518;5.85e-31;17!CL:1000449;3.43e-18;15!CL:1000507;7.57e-18;10!CL:1000494;7.57e-18;10!CL:0000239;6.74e-16;3!CL:1000615;6.74e-16;3!CL:0002306;6.74e-16;3!CL:0002681;6.36e-15;12!CL:0002584;6.36e-15;12!CL:0000313;1.48e-12;1!CL:1000746;4.16e-07;7!CL:1000612;4.16e-07;7!CL:0000159;6.61e-07;2 | |ontology_enrichment_celltype_v019=CL:1000497;5.85e-31;17!CL:0002518;5.85e-31;17!CL:1000449;3.43e-18;15!CL:1000507;7.57e-18;10!CL:1000494;7.57e-18;10!CL:0000239;6.74e-16;3!CL:1000615;6.74e-16;3!CL:0002306;6.74e-16;3!CL:0002681;6.36e-15;12!CL:0002584;6.36e-15;12!CL:0000313;1.48e-12;1!CL:1000746;4.16e-07;7!CL:1000612;4.16e-07;7!CL:0000159;6.61e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:1000497,6.70e-31,17;CL:0002518,6.70e-31,17;CL:1000449,3.90e-18,15;CL:1000507,8.27e-18,10;CL:1000494,8.27e-18,10;CL:0000239,7.83e-16,3;CL:1000615,7.83e-16,3;CL:0002306,7.83e-16,3;CL:0002681,7.91e-15,12;CL:0002584,7.91e-15,12;CL:0000313,1.25e-12,1;CL:1000746,4.71e-07,7;CL:1000612,4.71e-07,7;CL:0000159,6.07e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003918;4.00e-18;10!UBERON:0007687;4.00e-18;10 | |ontology_enrichment_development_v019=UBERON:0003918;4.00e-18;10!UBERON:0007687;4.00e-18;10 | ||
|ontology_enrichment_disease=DOID:4468!5.48e-07!2 | |ontology_enrichment_disease=DOID:4468!5.48e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:4468;1.88e-23;2!DOID:2152;1.48e-12;1 | |ontology_enrichment_disease_v019=DOID:4468;1.88e-23;2!DOID:2152;1.48e-12;1 | ||
|ontology_enrichment_disease_v019_2=DOID:4468,1.78e-23,2;DOID:2152,1.25e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0002113!6.82e-20!27;UBERON:0003918!6.82e-20!27;UBERON:0005095!6.82e-20!27;UBERON:0007687!6.82e-20!27;UBERON:0004211!7.95e-19!16;UBERON:0001285!7.95e-19!16;UBERON:0007684!7.95e-19!16;UBERON:0003220!7.95e-19!16;UBERON:0004208!7.95e-19!16;UBERON:0006555!1.47e-17!17;UBERON:0005103!1.47e-17!17;UBERON:0000083!1.47e-17!17;UBERON:0009201!1.47e-17!17;UBERON:0004819!1.47e-17!17;UBERON:0006553!1.47e-17!17;UBERON:0003074!1.47e-17!17;UBERON:0003060!1.47e-17!17;UBERON:0009773!2.95e-17!12;UBERON:0001231!2.95e-17!12;UBERON:0004810!2.95e-17!12;UBERON:0000080!1.96e-16!18;UBERON:0002120!1.96e-16!18;UBERON:0004875!1.96e-16!18;UBERON:0005721!1.96e-16!18;UBERON:0005754!1.96e-16!18;UBERON:0007297!1.96e-16!18;UBERON:0000489!3.83e-16!32;UBERON:0001225!7.57e-16!13;UBERON:0008987!7.57e-16!13;UBERON:0001851!2.79e-15!16;UBERON:0000058!9.36e-15!26;UBERON:0004876!1.60e-14!20;UBERON:0006554!9.05e-14!44;UBERON:0003887!1.05e-13!21;UBERON:0001008!2.31e-13!45;UBERON:0005172!6.24e-13!55;UBERON:0005173!6.24e-13!55;UBERON:0002417!1.54e-12!61;UBERON:0000916!1.54e-12!61;UBERON:0003914!8.45e-12!118;UBERON:0000353!1.17e-11!17;UBERON:0003064!7.01e-11!37;UBERON:0001986!2.37e-10!18;UBERON:0004638!2.37e-10!18;UBERON:0004852!2.37e-10!18;UBERON:0005177!4.93e-10!107;UBERON:0006853!2.02e-09!3;UBERON:0007685!2.02e-09!3;UBERON:0004134!2.02e-09!3;UBERON:0009569!4.13e-09!113;UBERON:0004111!1.02e-08!241;UBERON:0000025!1.42e-08!194;UBERON:0000487!3.83e-08!22;UBERON:0003103!3.89e-08!69;UBERON:0000466!4.16e-08!126;UBERON:0001638!2.59e-07!9;UBERON:0003920!2.59e-07!9;UBERON:0004582!2.59e-07!9;UBERON:0003886!4.36e-07!63;UBERON:0006914!5.87e-07!25;UBERON:0002100!5.98e-07!216;UBERON:0000119!6.51e-07!312;UBERON:0000464!9.02e-07!104 | |ontology_enrichment_uberon=UBERON:0002113!6.82e-20!27;UBERON:0003918!6.82e-20!27;UBERON:0005095!6.82e-20!27;UBERON:0007687!6.82e-20!27;UBERON:0004211!7.95e-19!16;UBERON:0001285!7.95e-19!16;UBERON:0007684!7.95e-19!16;UBERON:0003220!7.95e-19!16;UBERON:0004208!7.95e-19!16;UBERON:0006555!1.47e-17!17;UBERON:0005103!1.47e-17!17;UBERON:0000083!1.47e-17!17;UBERON:0009201!1.47e-17!17;UBERON:0004819!1.47e-17!17;UBERON:0006553!1.47e-17!17;UBERON:0003074!1.47e-17!17;UBERON:0003060!1.47e-17!17;UBERON:0009773!2.95e-17!12;UBERON:0001231!2.95e-17!12;UBERON:0004810!2.95e-17!12;UBERON:0000080!1.96e-16!18;UBERON:0002120!1.96e-16!18;UBERON:0004875!1.96e-16!18;UBERON:0005721!1.96e-16!18;UBERON:0005754!1.96e-16!18;UBERON:0007297!1.96e-16!18;UBERON:0000489!3.83e-16!32;UBERON:0001225!7.57e-16!13;UBERON:0008987!7.57e-16!13;UBERON:0001851!2.79e-15!16;UBERON:0000058!9.36e-15!26;UBERON:0004876!1.60e-14!20;UBERON:0006554!9.05e-14!44;UBERON:0003887!1.05e-13!21;UBERON:0001008!2.31e-13!45;UBERON:0005172!6.24e-13!55;UBERON:0005173!6.24e-13!55;UBERON:0002417!1.54e-12!61;UBERON:0000916!1.54e-12!61;UBERON:0003914!8.45e-12!118;UBERON:0000353!1.17e-11!17;UBERON:0003064!7.01e-11!37;UBERON:0001986!2.37e-10!18;UBERON:0004638!2.37e-10!18;UBERON:0004852!2.37e-10!18;UBERON:0005177!4.93e-10!107;UBERON:0006853!2.02e-09!3;UBERON:0007685!2.02e-09!3;UBERON:0004134!2.02e-09!3;UBERON:0009569!4.13e-09!113;UBERON:0004111!1.02e-08!241;UBERON:0000025!1.42e-08!194;UBERON:0000487!3.83e-08!22;UBERON:0003103!3.89e-08!69;UBERON:0000466!4.16e-08!126;UBERON:0001638!2.59e-07!9;UBERON:0003920!2.59e-07!9;UBERON:0004582!2.59e-07!9;UBERON:0003886!4.36e-07!63;UBERON:0006914!5.87e-07!25;UBERON:0002100!5.98e-07!216;UBERON:0000119!6.51e-07!312;UBERON:0000464!9.02e-07!104 | ||
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| ||
|short_description=p21@WWTR1 | |short_description=p21@WWTR1 | ||
}} | }} |
Latest revision as of 21:54, 15 September 2015
Short description: | p21@WWTR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_WWTR1_5end |
Coexpression cluster: | C1922_renal_mesothelioma_serous_Renal_glioblastoma_Skeletal_lung |
Association with transcript: | -144bp_to_ENST00000485244_5end |
EntrezGene: | WWTR1 |
HGNC: | 24042 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 6.70e-31 | 17 |
kidney epithelial cell | 6.70e-31 | 17 |
epithelial cell of nephron | 3.90e-18 | 15 |
kidney tubule cell | 8.27e-18 | 10 |
nephron tubule epithelial cell | 8.27e-18 | 10 |
brush border epithelial cell | 7.83e-16 | 3 |
kidney cortex tubule cell | 7.83e-16 | 3 |
epithelial cell of proximal tubule | 7.83e-16 | 3 |
kidney cortical cell | 7.91e-15 | 12 |
renal cortical epithelial cell | 7.91e-15 | 12 |
serous secreting cell | 1.25e-12 | 1 |
glomerular cell | 4.71e-07 | 7 |
kidney corpuscule cell | 4.71e-07 | 7 |
seromucus secreting cell | 6.07e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.78e-23 | 2 |
ovary epithelial cancer | 1.25e-12 | 1 |