FFCP PHASE1:Hg19::chr2:33172178..33172189,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4052 | |EntrezGene=4052 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6714 | |HGNC=6714 | ||
|TSSclassifier=strong | |||
|UniProt=Q14766 | |UniProt=Q14766 | ||
|association_with_transcript=139bp_to_ENST00000404816_5end | |association_with_transcript=139bp_to_ENST00000404816_5end | ||
|cluster_id=chr2:33172178..33172189,+ | |||
|description=CAGE_peak_9_at_LTBP1_5end | |description=CAGE_peak_9_at_LTBP1_5end | ||
|id=chr2:33172178..33172189,+ | |id=chr2:33172178..33172189,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;3.14e-08;19!CL:1000449;8.54e-08;15!CL:1000507;6.23e-07;10!CL:1000494;6.23e-07;10!CL:0002605;7.41e-07;3 | |ontology_enrichment_celltype_v019=CL:0000349;3.14e-08;19!CL:1000449;8.54e-08;15!CL:1000507;6.23e-07;10!CL:1000494;6.23e-07;10!CL:0002605;7.41e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.19e-08,19;CL:1000449,7.84e-08,15;CL:1000507,6.89e-07,10;CL:1000494,6.89e-07,10;CL:1000497,9.69e-07,17;CL:0002518,9.69e-07,17 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0005631;6.10e-11;10!UBERON:0000158;6.10e-11;10!UBERON:0000305;1.38e-08;7!UBERON:0006555;8.54e-08;15!UBERON:0004819;8.54e-08;15!UBERON:0001285;8.54e-08;15!UBERON:0007684;8.54e-08;15!UBERON:0000478;1.60e-07;24!UBERON:0004211;6.23e-07;10!UBERON:0009773;6.23e-07;10!UBERON:0001231;6.23e-07;10!UBERON:0004810;6.23e-07;10!UBERON:0002113;8.14e-07;24!UBERON:0011143;8.14e-07;24 | |ontology_enrichment_uberon_v019=UBERON:0005631;6.10e-11;10!UBERON:0000158;6.10e-11;10!UBERON:0000305;1.38e-08;7!UBERON:0006555;8.54e-08;15!UBERON:0004819;8.54e-08;15!UBERON:0001285;8.54e-08;15!UBERON:0007684;8.54e-08;15!UBERON:0000478;1.60e-07;24!UBERON:0004211;6.23e-07;10!UBERON:0009773;6.23e-07;10!UBERON:0001231;6.23e-07;10!UBERON:0004810;6.23e-07;10!UBERON:0002113;8.14e-07;24!UBERON:0011143;8.14e-07;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,9.33e-12,14;UBERON:0000158,9.33e-12,14;UBERON:0000305,1.90e-08,7;UBERON:0004211,7.84e-08,15;UBERON:0009773,7.84e-08,15;UBERON:0001231,7.84e-08,15;UBERON:0001285,7.84e-08,15;UBERON:0007684,7.84e-08,15;UBERON:0004208,7.84e-08,15;UBERON:0000478,2.13e-07,24;UBERON:0004871,2.54e-07,8;UBERON:0006555,2.99e-07,16;UBERON:0004819,2.99e-07,16;UBERON:0004810,6.89e-07,10 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0.491467873003018,0,1.09220686065086,2.63766978228454,0.618831764800233,0.662794751455832,0.672325146451775,2.41077811209591,1.46062018077475,0.487932798790507,0.369363174230364,0.204000691244253,0,1.43117993565528,1.09499540058307,1.12988375635323,0,0,0,0,0,0.154816123316076,0,0,0,0.774672005803016,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,0.511450247374121,0,0,0,0,0,0.189069634328136,1.10864698731282,0.43917392846563,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,1.13061588384802,0,0,0.208994966536811,0.516833518338658,0,1.00416183829401,0,0,0.488124115096339,0.367663080345869,0.81014194788176,0.357198913136319,0.673588117878509,0.675668882899933,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0.397227542439656,2.58152958673932,0,0.560677600142307,0,0.49333509683432,0.933633106199299,0.67355336034844,0.490385709340376,0.151357427644931,0.576175924479999,0.937285727335186,0,0.570471821544449,0.149448680551801,0.469737994575059,0.647491777472526,1.40450806702248,0.204154171254893,0.61417158655884,0.826606249406124,1.18800285728205,0,0,1.43723628363248,0.841680569770331,1.50142223846357,0,0,0.30648779579902,0.600952235626387,0.453728732640084,0.179389635688862,0.85422955527427,0.423863802319124,0,0.206105058476878,0.515281080091258,0.18611685633159,0,0.0974370051611986,0.504867548488229,0.0920498986422993,0,1.42003837006646,0.201504196455281,0.169560592310488,0.193260853163297,0.545492241181669,0,0.487894824518382,0.662648841607426,0.69716365721711,1.14027160516907,0.504641701751257,1.45990943630332,0,0,1.38134921352481,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,0,0,1.77236972004421,0,0.491953754172454,0.514703430895577,0.329250856225877,0,0,0.185176890317059,0.977424915930974,1.03993478527958,0,0.695582429850461,1.40890433082986,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.22001485746285,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0.714889968290738,0,0,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0.479249710983165,1.14861935834114,0,0,0,0,0,0,0,0,1.52456774533478,1.30139853857622,0,0.335032530668698,0,0,0,0,0.736148950314839,0,0,0.831883446123229,0.356857977594324,1.57702415033935,1.63997980989798,0.300946099727719,2.27407504055985,0,1.32845119707087,0.184369168541703,0.521301686808497,0.195801157462741,0.343143423810856,0,0,0,0.606255142892519,0,1.20956117331872,0.496215615637554,0.153461973288062,0,0,0,0.321707842287215,0,0.154209693802656,0,0.0821271560138091,2.07701771673448,0.116210378459959,0.846016147141356,0.200506470303285,0.0920809889358963,0.68888668898764,1.0925470080403,0.393373244878272,1.35359883872224,1.07821471946181,1.56869953835371,1.46139224653261,0.316654886678627,2.27466768141793,0.850468526382578,0.647747748306418,1.54227252690289,0.270946437543853,1.00337954770971,0.254876273045038,1.66215201785745,0.895499018888713,0.657779629937804,0.784306353074702,0.512900250232778,1.31205858279882,0.650756789328606,0.515205058238611,0.457847324091717,0.247528499761764,0,0.650060246036521,0,1.06337790121334,0.308097234229289,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0.0852266274161009,0.356128142586949,0.165284915360978,0.576570202095319,0.382838137483752,0.910420027699949,0,2.51849877464512,0.6970372701606,0,0,0,0.18532421910392,0,0,0.632758849437452,0.953150969619124,1.27948895655667,0.42793898803392,0.318203247925937,0.78494864019923,1.07923474549989,0.823611089208164,0.706874414074119,0,0,1.26377536871694,1.46290121726877,0,0,1.22849920267187,1.1312434556297,1.13008116620243,0,0.66343897524122,0,0,0.655894752046633,0.202910376962704,0,0,0.573645408816206,0.785992328104969,0,0.354761064070598,0.211107635297664,0,0.379473173765715,1.39973888097993,0,0,0,0.847294206991012,0,0,0,0.459446800413919,0,0,0,0.238231775457789,0,0,0,0,0.534120355637366,0.962479855263359,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0.166849141711909,0,0,0,0.270455678475983,0,0,0.18714054040822,0.293016358543788,0.121360521749513,0,0,2.62618933211459,3.26661148915902,3.37876772309155,0.994147647766298,0,1.11308705022906,0,1.90012867315194,0.19924798825107,0,0,0.102268682502155,0,0,0.179736702294654,0,0,0.591860433821602,0,0,0,0.185536196323703,0,0,0,0,0.341380344856499,0,0.236387681767936,0,0.291604613383254,0.520874984799877,0,0.120596438625408,0,0,0,0.219385397153973,1.52513848926586,0.83654246567162,1.00035336054936,0.455768223388005,0,0.718061155278177,1.08647371922008,1.27600463892768,0.915975934018623,3.19820865611181,0,0,0,0.225595660617181,0.392125068635479,0.503464760927528,0.75901493089674,0,0,0.163232808159148,1.27217764290547,0.216388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| ||
|short_description=p9@LTBP1 | |short_description=p9@LTBP1 | ||
}} | }} |
Latest revision as of 23:35, 16 September 2015
Short description: | p9@LTBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LTBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 139bp_to_ENST00000404816_5end |
EntrezGene: | LTBP1 |
HGNC: | 6714 |
UniProt: | Q14766 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.19e-08 | 19 |
epithelial cell of nephron | 7.84e-08 | 15 |
kidney tubule cell | 6.89e-07 | 10 |
nephron tubule epithelial cell | 6.89e-07 | 10 |
kidney cell | 9.69e-07 | 17 |
kidney epithelial cell | 9.69e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 9.33e-12 | 14 |
membranous layer | 9.33e-12 | 14 |
amnion | 1.90e-08 | 7 |
nephron epithelium | 7.84e-08 | 15 |
renal tubule | 7.84e-08 | 15 |
nephron tubule | 7.84e-08 | 15 |
nephron | 7.84e-08 | 15 |
uriniferous tubule | 7.84e-08 | 15 |
nephrogenic mesenchyme | 7.84e-08 | 15 |
extraembryonic structure | 2.13e-07 | 24 |
somatic layer of lateral plate mesoderm | 2.54e-07 | 8 |
excretory tube | 2.99e-07 | 16 |
kidney epithelium | 2.99e-07 | 16 |
nephron tubule epithelium | 6.89e-07 | 10 |