FFCP PHASE1:Hg19::chr21:16437194..16437205,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:16437194..16437205,-
|short_description=p3@NRIP1
|description=CAGE_peak_3_at_NRIP1_5end
|association_with_transcript=49bp_to_ENST00000400199_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8204 | |EntrezGene=8204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8001 | |HGNC=8001 | ||
|TSSclassifier=strong | |||
|UniProt=P48552 | |UniProt=P48552 | ||
|association_with_transcript=49bp_to_ENST00000400199_5end | |||
|cluster_id=chr21:16437194..16437205,- | |||
|description=CAGE_peak_3_at_NRIP1_5end | |||
|id=chr21:16437194..16437205,- | |||
|ontology_enrichment_celltype=CL:0000557!3.41e-10!71;CL:0000763!7.88e-09!112;CL:0000049!7.88e-09!112;CL:0000738!1.04e-08!140;CL:0000037!1.42e-08!172;CL:0000566!1.42e-08!172;CL:0000839!1.70e-08!70;CL:0000766!2.08e-08!76;CL:0002009!7.61e-08!65;CL:0002032!2.17e-07!165;CL:0000837!2.17e-07!165;CL:0000988!2.28e-07!182;CL:0002194!2.42e-07!63;CL:0000576!2.42e-07!63;CL:0000040!2.42e-07!63;CL:0000559!2.42e-07!63;CL:0002031!5.04e-07!124;CL:0002057!7.83e-07!42 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.11e-13,136;CL:0000037,5.58e-12,168;CL:0000988,6.35e-11,177;CL:0000557,1.40e-10,67;CL:0002032,1.55e-10,161;CL:0000837,1.55e-10,161;CL:0000766,5.39e-10,72;CL:0002031,9.02e-10,120;CL:0000763,1.29e-09,108;CL:0000049,1.29e-09,108;CL:0000839,4.52e-09,66;CL:0002087,3.57e-08,115;CL:0000451,1.63e-07,10;CL:0002009,3.58e-07,61;CL:0002194,6.86e-07,59;CL:0000576,6.86e-07,59;CL:0000040,6.86e-07,59;CL:0000559,6.86e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.46e-15!115;UBERON:0002390!8.38e-11!102;UBERON:0003061!8.38e-11!102;UBERON:0002193!1.43e-09!112;UBERON:0002371!2.71e-08!80;UBERON:0001474!3.66e-08!86;UBERON:0004765!3.98e-07!101;UBERON:0001434!3.98e-07!101;UBERON:0002780!4.57e-07!41;UBERON:0001890!4.57e-07!41;UBERON:0006240!4.57e-07!41;UBERON:0001049!7.10e-07!57;UBERON:0005068!7.10e-07!57;UBERON:0006241!7.10e-07!57;UBERON:0007135!7.10e-07!57;UBERON:0002619!9.66e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.18e-10;22!UBERON:0001950;3.76e-09;20!UBERON:0000956;8.07e-09;25!UBERON:0000203;8.07e-09;25!UBERON:0001893;1.78e-07;34!UBERON:0001869;2.30e-07;32!UBERON:0003528;4.16e-07;34!UBERON:0002020;4.16e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.60e-14,114;UBERON:0002619,8.39e-11,22;UBERON:0002780,3.82e-10,41;UBERON:0001890,3.82e-10,41;UBERON:0003080,3.82e-10,41;UBERON:0006240,3.82e-10,41;UBERON:0001950,1.93e-09,20;UBERON:0002390,2.47e-09,98;UBERON:0003061,2.47e-09,98;UBERON:0001893,5.41e-09,34;UBERON:0000956,6.00e-09,25;UBERON:0000203,6.00e-09,25;UBERON:0001869,6.28e-09,32;UBERON:0000073,1.22e-08,53;UBERON:0002616,1.22e-08,53;UBERON:0001049,1.58e-08,56;UBERON:0005068,1.58e-08,56;UBERON:0006241,1.58e-08,56;UBERON:0007135,1.58e-08,56;UBERON:0001474,3.27e-08,82;UBERON:0003528,3.43e-08,34;UBERON:0002020,3.43e-08,34;UBERON:0002371,3.56e-08,76;UBERON:0002193,5.00e-08,108;UBERON:0002791,7.49e-08,32;UBERON:0001017,8.70e-08,81;UBERON:0000955,1.95e-07,68;UBERON:0006238,1.95e-07,68;UBERON:0001016,9.58e-07,89 | |||
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| ||
|short_description=p3@NRIP1 | |||
}} | }} |
Latest revision as of 19:02, 17 September 2015
Short description: | p3@NRIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NRIP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 49bp_to_ENST00000400199_5end |
EntrezGene: | NRIP1 |
HGNC: | 8001 |
UniProt: | P48552 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.11e-13 | 136 |
hematopoietic stem cell | 5.58e-12 | 168 |
hematopoietic cell | 6.35e-11 | 177 |
granulocyte monocyte progenitor cell | 1.40e-10 | 67 |
hematopoietic oligopotent progenitor cell | 1.55e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.55e-10 | 161 |
myeloid leukocyte | 5.39e-10 | 72 |
hematopoietic lineage restricted progenitor cell | 9.02e-10 | 120 |
myeloid cell | 1.29e-09 | 108 |
common myeloid progenitor | 1.29e-09 | 108 |
myeloid lineage restricted progenitor cell | 4.52e-09 | 66 |
nongranular leukocyte | 3.57e-08 | 115 |
dendritic cell | 1.63e-07 | 10 |
macrophage dendritic cell progenitor | 3.58e-07 | 61 |
monopoietic cell | 6.86e-07 | 59 |
monocyte | 6.86e-07 | 59 |
monoblast | 6.86e-07 | 59 |
promonocyte | 6.86e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.60e-14 | 114 |
regional part of cerebral cortex | 8.39e-11 | 22 |
regional part of forebrain | 3.82e-10 | 41 |
forebrain | 3.82e-10 | 41 |
anterior neural tube | 3.82e-10 | 41 |
future forebrain | 3.82e-10 | 41 |
neocortex | 1.93e-09 | 20 |
hematopoietic system | 2.47e-09 | 98 |
blood island | 2.47e-09 | 98 |
telencephalon | 5.41e-09 | 34 |
cerebral cortex | 6.00e-09 | 25 |
pallium | 6.00e-09 | 25 |
cerebral hemisphere | 6.28e-09 | 32 |
regional part of nervous system | 1.22e-08 | 53 |
regional part of brain | 1.22e-08 | 53 |
neural tube | 1.58e-08 | 56 |
neural rod | 1.58e-08 | 56 |
future spinal cord | 1.58e-08 | 56 |
neural keel | 1.58e-08 | 56 |
bone element | 3.27e-08 | 82 |
brain grey matter | 3.43e-08 | 34 |
gray matter | 3.43e-08 | 34 |
bone marrow | 3.56e-08 | 76 |
hemolymphoid system | 5.00e-08 | 108 |
regional part of telencephalon | 7.49e-08 | 32 |
central nervous system | 8.70e-08 | 81 |
brain | 1.95e-07 | 68 |
future brain | 1.95e-07 | 68 |
nervous system | 9.58e-07 | 89 |