FFCP PHASE1:Hg19::chr12:120554622..120554648,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11021 | |EntrezGene=11021 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9774 | |HGNC=9774 | ||
|TSSclassifier=strong | |||
|UniProt=Q15286,B4E390 | |UniProt=Q15286,B4E390 | ||
|association_with_transcript=0bp_to_ENST00000229340,NM_001167606,NM_006861_5end | |association_with_transcript=0bp_to_ENST00000229340,NM_001167606,NM_006861_5end | ||
|cluster_id=chr12:120554622..120554648,- | |||
|description=CAGE_peak_2_at_RAB35_5end | |description=CAGE_peak_2_at_RAB35_5end | ||
|id=chr12:120554622..120554648,- | |id=chr12:120554622..120554648,- | ||
|ontology_enrichment_celltype=CL:0000066!5.49e-13!254;CL:0002321!2.71e-07!248;CL:0000220!6.56e-07!246 | |ontology_enrichment_celltype=CL:0000066!5.49e-13!254;CL:0002321!2.71e-07!248;CL:0000220!6.56e-07!246 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.07e-12,253;CL:0002321,8.43e-08,250 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000064!1.48e-10!219;UBERON:0000119!8.38e-09!312;UBERON:0000483!1.91e-08!309;UBERON:0000481!2.30e-08!347;UBERON:0000475!2.67e-08!365;UBERON:0004121!5.29e-08!169;UBERON:0001950!1.12e-07!20;UBERON:0003075!1.42e-07!86;UBERON:0007284!1.42e-07!86;UBERON:0000956!1.61e-07!25;UBERON:0000203!1.61e-07!25;UBERON:0000924!1.84e-07!173;UBERON:0006601!1.84e-07!173;UBERON:0000033!3.71e-07!123;UBERON:0002619!8.24e-07!22;UBERON:0002346!8.46e-07!90;UBERON:0000922!9.27e-07!612 | |ontology_enrichment_uberon=UBERON:0000064!1.48e-10!219;UBERON:0000119!8.38e-09!312;UBERON:0000483!1.91e-08!309;UBERON:0000481!2.30e-08!347;UBERON:0000475!2.67e-08!365;UBERON:0004121!5.29e-08!169;UBERON:0001950!1.12e-07!20;UBERON:0003075!1.42e-07!86;UBERON:0007284!1.42e-07!86;UBERON:0000956!1.61e-07!25;UBERON:0000203!1.61e-07!25;UBERON:0000924!1.84e-07!173;UBERON:0006601!1.84e-07!173;UBERON:0000033!3.71e-07!123;UBERON:0002619!8.24e-07!22;UBERON:0002346!8.46e-07!90;UBERON:0000922!9.27e-07!612 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;3.72e-08;20!UBERON:0000956;5.34e-08;25!UBERON:0000203;5.34e-08;25!UBERON:0002619;3.11e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0001950;3.72e-08;20!UBERON:0000956;5.34e-08;25!UBERON:0000203;5.34e-08;25!UBERON:0002619;3.11e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,4.30e-09,104;UBERON:0000119,4.51e-09,309;UBERON:0000483,1.05e-08,306;UBERON:0001950,9.67e-08,20;UBERON:0003075,9.87e-08,82;UBERON:0007284,9.87e-08,82;UBERON:0004121,1.29e-07,171;UBERON:0000924,1.29e-07,171;UBERON:0006601,1.29e-07,171;UBERON:0000956,1.67e-07,25;UBERON:0000203,1.67e-07,25;UBERON:0010314,4.57e-07,132;UBERON:0002346,7.34e-07,86;UBERON:0002619,8.71e-07,22 | |||
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| ||
|short_description=p2@RAB35 | |short_description=p2@RAB35 | ||
}} | }} |
Latest revision as of 19:18, 16 September 2015
Short description: | p2@RAB35 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RAB35_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000229340, NM_001167606, NM_006861_5end |
EntrezGene: | RAB35 |
HGNC: | 9774 |
UniProt: | Q15286B4E390 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.07e-12 | 253 |
embryonic cell | 8.43e-08 | 250 |
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 4.30e-09 | 104 |
cell layer | 4.51e-09 | 309 |
epithelium | 1.05e-08 | 306 |
neocortex | 9.67e-08 | 20 |
neural plate | 9.87e-08 | 82 |
presumptive neural plate | 9.87e-08 | 82 |
ectoderm-derived structure | 1.29e-07 | 171 |
ectoderm | 1.29e-07 | 171 |
presumptive ectoderm | 1.29e-07 | 171 |
cerebral cortex | 1.67e-07 | 25 |
pallium | 1.67e-07 | 25 |
structure with developmental contribution from neural crest | 4.57e-07 | 132 |
neurectoderm | 7.34e-07 | 86 |
regional part of cerebral cortex | 8.71e-07 | 22 |