FFCP PHASE1:Hg19::chr21:39491017..39491031,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:39491017..39491031,+
|short_description=p@chr21:39491017..39491031,+
|description=CAGE_peak_at_chr21:39491017..39491031,+
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:39491017..39491031,+ | |||
|coexpression_cluster_id=C121 | |||
|description=CAGE_peak_at_chr21:39491017..39491031,+ | |||
|id=chr21:39491017..39491031,+ | |||
|ontology_enrichment_celltype=CL:0002127!5.56e-16!1;CL:0000914!5.56e-16!1;CL:0000911!5.56e-16!1;CL:0000814!5.56e-16!1;CL:0002042!5.56e-16!1;CL:0002039!5.56e-16!1;CL:0002040!5.56e-16!1;CL:0002041!5.56e-16!1;CL:0000893!1.20e-08!2;CL:0002489!1.20e-08!2;CL:0000809!1.20e-08!2;CL:0000808!1.20e-08!2;CL:0000894!1.20e-08!2;CL:0000806!1.20e-08!2;CL:0000807!1.20e-08!2;CL:0000805!1.20e-08!2;CL:0002425!1.20e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002127;6.62e-41;1!CL:0000911;6.62e-41;1!CL:0000814;6.62e-41;1!CL:0000084;2.17e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,6.62e-41,1;CL:0000914,6.62e-41,1;CL:0000911,6.62e-41,1;CL:0000814,6.62e-41,1;CL:0002042,6.62e-41,1;CL:0002039,6.62e-41,1;CL:0002040,6.62e-41,1;CL:0002041,6.62e-41,1;CL:0000893,3.11e-21,2;CL:0002489,3.11e-21,2;CL:0000809,3.11e-21,2;CL:0000808,3.11e-21,2;CL:0000894,3.11e-21,2;CL:0000806,3.11e-21,2;CL:0000807,3.11e-21,2;CL:0000805,3.11e-21,2;CL:0002425,3.11e-21,2;CL:0000084,2.14e-07,25;CL:0000827,2.14e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002425;3.11e-21;2 | |||
|ontology_enrichment_disease=DOID:1036!7.85e-29!8;DOID:1240!1.48e-17!39;DOID:1799!2.06e-15!1;DOID:10165!2.06e-15!1;DOID:1798!2.06e-15!1;DOID:2531!2.57e-13!51;DOID:0060083!2.57e-13!51;DOID:8692!1.56e-11!31 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.21e-20;8!DOID:1240;1.26e-14;39!DOID:2531;7.74e-13;51!DOID:0060083;7.74e-13;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.21e-20,8;DOID:1240,6.61e-17,39;DOID:2531,4.19e-13,51;DOID:0060083,4.19e-13,51 | |||
|ontology_enrichment_uberon=UBERON:0001282!7.46e-16!1;UBERON:0009842!7.46e-16!1;UBERON:0003704!7.46e-16!1;UBERON:0001171!7.46e-16!1;UBERON:0001172!7.46e-16!1;UBERON:0003112!2.75e-15!1;UBERON:0000032!2.75e-15!1;UBERON:0005253!2.75e-15!1;UBERON:0003128!2.75e-15!1;UBERON:0002241!2.75e-15!1;UBERON:0001703!2.75e-15!1;UBERON:0004761!2.75e-15!1;UBERON:0009617!2.75e-15!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;1.21e-40;1!UBERON:0009842;1.21e-40;1!UBERON:0003704;1.21e-40;1!UBERON:0001171;1.21e-40;1!UBERON:0001172;1.21e-40;1!UBERON:0001280;1.50e-14;3!UBERON:0004647;1.50e-14;3!UBERON:0002394;2.94e-11;4!UBERON:0003928;2.94e-11;4!UBERON:0002294;5.54e-07;7!UBERON:0001173;5.54e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.48e-40,1;UBERON:0009842,1.48e-40,1;UBERON:0003704,1.48e-40,1;UBERON:0001171,1.48e-40,1;UBERON:0001172,1.48e-40,1;UBERON:0001280,1.60e-14,3;UBERON:0004647,1.60e-14,3;UBERON:0005171,1.60e-14,3;UBERON:0002370,2.53e-11,4;UBERON:0005058,2.53e-11,4;UBERON:0009113,2.53e-11,4;UBERON:0003295,2.53e-11,4;UBERON:0005562,2.53e-11,4;UBERON:0003351,5.54e-08,6;UBERON:0002394,6.34e-08,6;UBERON:0003928,6.34e-08,6;UBERON:0004177,5.08e-07,7;UBERON:0005057,5.08e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,107.601738233786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,2.67464122265948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39278317278703,0,0,0,0,0,0,0,0,0,1.35357396370308,0.784250137270958,1.34257269580674,0.37950746544837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509197589862076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,107.601738233786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,2.67464122265948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39278317278703,0,0,0,0,0,0,0,0,0,1.35357396370308,0.784250137270958,1.34257269580674,0.37950746544837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509197589862076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr21:39491017..39491031,+ | |||
}} | }} |
Latest revision as of 17:48, 28 July 2015
Short description: | p@chr21:39491017..39491031, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:39491017..39491031, + |
Coexpression cluster: | C121_NK_Natural_CD8_CD4_anaplastic_chronic_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 6.62e-41 | 1 |
immature NK T cell | 6.62e-41 | 1 |
effector T cell | 6.62e-41 | 1 |
mature NK T cell | 6.62e-41 | 1 |
immature NK T cell stage IV | 6.62e-41 | 1 |
immature NK T cell stage I | 6.62e-41 | 1 |
immature NK T cell stage II | 6.62e-41 | 1 |
immature NK T cell stage III | 6.62e-41 | 1 |
thymocyte | 3.11e-21 | 2 |
double negative thymocyte | 3.11e-21 | 2 |
double-positive, alpha-beta thymocyte | 3.11e-21 | 2 |
DN4 thymocyte | 3.11e-21 | 2 |
DN1 thymic pro-T cell | 3.11e-21 | 2 |
DN2 thymocyte | 3.11e-21 | 2 |
DN3 thymocyte | 3.11e-21 | 2 |
immature single positive thymocyte | 3.11e-21 | 2 |
early T lineage precursor | 3.11e-21 | 2 |
T cell | 2.14e-07 | 25 |
pro-T cell | 2.14e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 1.48e-40 | 1 |
acinus | 1.48e-40 | 1 |
intrahepatic bile duct | 1.48e-40 | 1 |
portal lobule | 1.48e-40 | 1 |
hepatic acinus | 1.48e-40 | 1 |
liver parenchyma | 1.60e-14 | 3 |
liver lobule | 1.60e-14 | 3 |
hepatic duct | 1.60e-14 | 3 |
thymus | 2.53e-11 | 4 |
hemolymphoid system gland | 2.53e-11 | 4 |
thymic region | 2.53e-11 | 4 |
pharyngeal gland | 2.53e-11 | 4 |
thymus primordium | 2.53e-11 | 4 |
pharyngeal epithelium | 5.54e-08 | 6 |
bile duct | 6.34e-08 | 6 |
digestive system duct | 6.34e-08 | 6 |
hemopoietic organ | 5.08e-07 | 7 |
immune organ | 5.08e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.21e-20 | 8 |
leukemia | 6.61e-17 | 39 |
hematologic cancer | 4.19e-13 | 51 |
immune system cancer | 4.19e-13 | 51 |