FFCP PHASE1:Hg19::chr10:102505297..102505302,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5076 | |EntrezGene=5076 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8616 | |HGNC=8616 | ||
|TSSclassifier=strong | |||
|UniProt=Q02962 | |UniProt=Q02962 | ||
|association_with_transcript=-165bp_to_ENST00000355243,ENST00000361791,ENST00000370294,ENST00000370296,ENST00000428433,NM_000278,NM_003987,NM_003988,NM_003989,NM_003990,uc001krk.3,uc001krl.3,uc001krm.3,uc001krn.3,uc001kro.3,uc010qps.1_5end | |association_with_transcript=-165bp_to_ENST00000355243,ENST00000361791,ENST00000370294,ENST00000370296,ENST00000428433,NM_000278,NM_003987,NM_003988,NM_003989,NM_003990,uc001krk.3,uc001krl.3,uc001krm.3,uc001krn.3,uc001kro.3,uc010qps.1_5end | ||
|cluster_id=chr10:102505297..102505302,+ | |||
|coexpression_cluster_id=C1556 | |coexpression_cluster_id=C1556 | ||
|description=CAGE_peak_11_at_PAX2_5end | |description=CAGE_peak_11_at_PAX2_5end | ||
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|ontology_enrichment_celltype=CL:1000497!1.50e-27!18;CL:0002518!1.50e-27!18;CL:1000507!6.73e-21!12;CL:1000494!6.73e-21!12;CL:1000449!5.56e-20!16;CL:0002681!4.11e-14!13;CL:0002584!4.11e-14!13;CL:0000650!2.87e-08!3;CL:1000618!2.87e-08!3;CL:1001318!2.87e-08!3;CL:0002173!2.87e-08!3;CL:1000500!2.87e-08!3;CL:1000612!2.03e-07!7;CL:1000746!2.03e-07!7 | |ontology_enrichment_celltype=CL:1000497!1.50e-27!18;CL:0002518!1.50e-27!18;CL:1000507!6.73e-21!12;CL:1000494!6.73e-21!12;CL:1000449!5.56e-20!16;CL:0002681!4.11e-14!13;CL:0002584!4.11e-14!13;CL:0000650!2.87e-08!3;CL:1000618!2.87e-08!3;CL:1001318!2.87e-08!3;CL:0002173!2.87e-08!3;CL:1000500!2.87e-08!3;CL:1000612!2.03e-07!7;CL:1000746!2.03e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000650;8.34e-18;2!CL:1000500;8.34e-18;2!CL:1000618;8.34e-18;2!CL:1001318;8.34e-18;2!CL:0002173;8.34e-18;2!CL:0000669;1.38e-09;4 | |ontology_enrichment_celltype_v019=CL:0000650;8.34e-18;2!CL:1000500;8.34e-18;2!CL:1000618;8.34e-18;2!CL:1001318;8.34e-18;2!CL:0002173;8.34e-18;2!CL:0000669;1.38e-09;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000650,1.27e-17,2;CL:1000500,1.27e-17,2;CL:1000618,1.27e-17,2;CL:1001318,1.27e-17,2;CL:0002173,1.27e-17,2;CL:0000669,1.70e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0007297;8.34e-18;2 | |ontology_enrichment_development_v019=UBERON:0007297;8.34e-18;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1115;1.33e-07;20 | |ontology_enrichment_disease_v019=DOID:1115;1.33e-07;20 | ||
|ontology_enrichment_disease_v019_2=DOID:1115,1.38e-07,20 | |||
|ontology_enrichment_uberon=UBERON:0002113!3.28e-41!27;UBERON:0003918!3.28e-41!27;UBERON:0005095!3.28e-41!27;UBERON:0007687!3.28e-41!27;UBERON:0000489!4.20e-39!32;UBERON:0000080!7.98e-28!18;UBERON:0002120!7.98e-28!18;UBERON:0004875!7.98e-28!18;UBERON:0005721!7.98e-28!18;UBERON:0005754!7.98e-28!18;UBERON:0007297!7.98e-28!18;UBERON:0004876!7.46e-25!20;UBERON:0006554!5.37e-24!44;UBERON:0006555!7.27e-24!17;UBERON:0005103!7.27e-24!17;UBERON:0000083!7.27e-24!17;UBERON:0009201!7.27e-24!17;UBERON:0004819!7.27e-24!17;UBERON:0006553!7.27e-24!17;UBERON:0003074!7.27e-24!17;UBERON:0003060!7.27e-24!17;UBERON:0003887!1.40e-23!21;UBERON:0001008!2.17e-23!45;UBERON:0000058!9.07e-23!26;UBERON:0005172!3.08e-21!55;UBERON:0005173!3.08e-21!55;UBERON:0009773!6.73e-21!12;UBERON:0001231!6.73e-21!12;UBERON:0004810!6.73e-21!12;UBERON:0004211!5.56e-20!16;UBERON:0001285!5.56e-20!16;UBERON:0007684!5.56e-20!16;UBERON:0003220!5.56e-20!16;UBERON:0004208!5.56e-20!16;UBERON:0002417!8.51e-19!61;UBERON:0000916!8.51e-19!61;UBERON:0006947!2.48e-17!3;UBERON:0004054!2.48e-17!3;UBERON:0003103!3.29e-16!69;UBERON:0001896!4.32e-16!3;UBERON:0005290!4.32e-16!3;UBERON:0010096!4.32e-16!3;UBERON:0003076!8.75e-16!15;UBERON:0003057!8.75e-16!15;UBERON:0001851!2.78e-15!16;UBERON:0003064!2.99e-15!37;UBERON:0004733!1.05e-14!12;UBERON:0002028!1.05e-14!12;UBERON:0007277!1.05e-14!12;UBERON:0001225!4.11e-14!13;UBERON:0008987!4.11e-14!13;UBERON:0005177!1.42e-13!107;UBERON:0004732!1.56e-13!13;UBERON:0005904!4.01e-13!4;UBERON:0000353!1.19e-10!17;UBERON:0002298!2.10e-10!8;UBERON:0009569!8.62e-10!113;UBERON:0003567!2.87e-08!3;UBERON:0003838!2.87e-08!3;UBERON:0005169!2.87e-08!3;UBERON:0002321!2.87e-08!3;UBERON:0005215!2.87e-08!3;UBERON:0002303!2.87e-08!3;UBERON:0002319!2.87e-08!3;UBERON:0003886!4.62e-08!63;UBERON:0000074!2.03e-07!7;UBERON:0001229!2.03e-07!7;UBERON:0001230!2.03e-07!7;UBERON:0005749!2.03e-07!7;UBERON:0004199!2.03e-07!7;UBERON:0004209!2.03e-07!7;UBERON:0004198!2.03e-07!7;UBERON:0002553!4.74e-07!70;UBERON:0001301!5.58e-07!1;UBERON:0001000!6.59e-07!1;UBERON:0005352!6.59e-07!1;UBERON:0000998!8.21e-07!1;UBERON:0006868!8.21e-07!1 | |ontology_enrichment_uberon=UBERON:0002113!3.28e-41!27;UBERON:0003918!3.28e-41!27;UBERON:0005095!3.28e-41!27;UBERON:0007687!3.28e-41!27;UBERON:0000489!4.20e-39!32;UBERON:0000080!7.98e-28!18;UBERON:0002120!7.98e-28!18;UBERON:0004875!7.98e-28!18;UBERON:0005721!7.98e-28!18;UBERON:0005754!7.98e-28!18;UBERON:0007297!7.98e-28!18;UBERON:0004876!7.46e-25!20;UBERON:0006554!5.37e-24!44;UBERON:0006555!7.27e-24!17;UBERON:0005103!7.27e-24!17;UBERON:0000083!7.27e-24!17;UBERON:0009201!7.27e-24!17;UBERON:0004819!7.27e-24!17;UBERON:0006553!7.27e-24!17;UBERON:0003074!7.27e-24!17;UBERON:0003060!7.27e-24!17;UBERON:0003887!1.40e-23!21;UBERON:0001008!2.17e-23!45;UBERON:0000058!9.07e-23!26;UBERON:0005172!3.08e-21!55;UBERON:0005173!3.08e-21!55;UBERON:0009773!6.73e-21!12;UBERON:0001231!6.73e-21!12;UBERON:0004810!6.73e-21!12;UBERON:0004211!5.56e-20!16;UBERON:0001285!5.56e-20!16;UBERON:0007684!5.56e-20!16;UBERON:0003220!5.56e-20!16;UBERON:0004208!5.56e-20!16;UBERON:0002417!8.51e-19!61;UBERON:0000916!8.51e-19!61;UBERON:0006947!2.48e-17!3;UBERON:0004054!2.48e-17!3;UBERON:0003103!3.29e-16!69;UBERON:0001896!4.32e-16!3;UBERON:0005290!4.32e-16!3;UBERON:0010096!4.32e-16!3;UBERON:0003076!8.75e-16!15;UBERON:0003057!8.75e-16!15;UBERON:0001851!2.78e-15!16;UBERON:0003064!2.99e-15!37;UBERON:0004733!1.05e-14!12;UBERON:0002028!1.05e-14!12;UBERON:0007277!1.05e-14!12;UBERON:0001225!4.11e-14!13;UBERON:0008987!4.11e-14!13;UBERON:0005177!1.42e-13!107;UBERON:0004732!1.56e-13!13;UBERON:0005904!4.01e-13!4;UBERON:0000353!1.19e-10!17;UBERON:0002298!2.10e-10!8;UBERON:0009569!8.62e-10!113;UBERON:0003567!2.87e-08!3;UBERON:0003838!2.87e-08!3;UBERON:0005169!2.87e-08!3;UBERON:0002321!2.87e-08!3;UBERON:0005215!2.87e-08!3;UBERON:0002303!2.87e-08!3;UBERON:0002319!2.87e-08!3;UBERON:0003886!4.62e-08!63;UBERON:0000074!2.03e-07!7;UBERON:0001229!2.03e-07!7;UBERON:0001230!2.03e-07!7;UBERON:0005749!2.03e-07!7;UBERON:0004199!2.03e-07!7;UBERON:0004209!2.03e-07!7;UBERON:0004198!2.03e-07!7;UBERON:0002553!4.74e-07!70;UBERON:0001301!5.58e-07!1;UBERON:0001000!6.59e-07!1;UBERON:0005352!6.59e-07!1;UBERON:0000998!8.21e-07!1;UBERON:0006868!8.21e-07!1 | ||
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|short_description=p11@PAX2 | |short_description=p11@PAX2 | ||
}} | }} |
Latest revision as of 22:09, 15 September 2015
Short description: | p11@PAX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PAX2_5end |
Coexpression cluster: | C1556_epididymis_seminal_Renal_ductus_kidney_rhabdomyosarcoma_renal |
Association with transcript: | -165bp_to_ENST00000355243, ENST00000361791, ENST00000370294, ENST00000370296, ENST00000428433, NM_000278, NM_003987, NM_003988, NM_003989, NM_003990, uc001krk.3, uc001krl.3, uc001krm.3, uc001krn.3, uc001kro.3, uc010qps.1_5end |
EntrezGene: | PAX2 |
HGNC: | 8616 |
UniProt: | Q02962 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 1.27e-17 | 2 |
kidney interstitial cell | 1.27e-17 | 2 |
juxtaglomerular complex cell | 1.27e-17 | 2 |
renal interstitial pericyte | 1.27e-17 | 2 |
extraglomerular mesangial cell | 1.27e-17 | 2 |
pericyte cell | 1.70e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
sarcoma | 1.38e-07 | 20 |