FFCP PHASE1:Hg19::chr9:132044730..132044797,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000455981_5end | |association_with_transcript=0bp_to_ENST00000455981_5end | ||
|cluster_id=chr9:132044730..132044797,+ | |||
|coexpression_cluster_id=C1003 | |coexpression_cluster_id=C1003 | ||
|description=CAGE_peak_1_at_ENST00000455981_5end | |description=CAGE_peak_1_at_ENST00000455981_5end | ||
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|ontology_enrichment_celltype=CL:0000766!2.79e-29!76;CL:0002009!1.08e-26!65;CL:0002194!4.10e-26!63;CL:0000576!4.10e-26!63;CL:0000040!4.10e-26!63;CL:0000559!4.10e-26!63;CL:0000557!9.35e-25!71;CL:0002057!4.60e-24!42;CL:0000839!1.90e-22!70;CL:0000860!3.45e-21!45;CL:0000763!1.51e-16!112;CL:0000049!1.51e-16!112;CL:0000738!4.18e-13!140;CL:0002087!4.27e-11!119;CL:0002031!1.54e-09!124;CL:0000037!7.24e-09!172;CL:0000566!7.24e-09!172;CL:0002032!6.03e-08!165;CL:0000837!6.03e-08!165;CL:0000988!2.33e-07!182;CL:0000094!3.61e-07!8 | |ontology_enrichment_celltype=CL:0000766!2.79e-29!76;CL:0002009!1.08e-26!65;CL:0002194!4.10e-26!63;CL:0000576!4.10e-26!63;CL:0000040!4.10e-26!63;CL:0000559!4.10e-26!63;CL:0000557!9.35e-25!71;CL:0002057!4.60e-24!42;CL:0000839!1.90e-22!70;CL:0000860!3.45e-21!45;CL:0000763!1.51e-16!112;CL:0000049!1.51e-16!112;CL:0000738!4.18e-13!140;CL:0002087!4.27e-11!119;CL:0002031!1.54e-09!124;CL:0000037!7.24e-09!172;CL:0000566!7.24e-09!172;CL:0002032!6.03e-08!165;CL:0000837!6.03e-08!165;CL:0000988!2.33e-07!182;CL:0000094!3.61e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.18e-25;39!CL:0000234;2.18e-25;39!CL:0000860;6.68e-24;33!CL:0002057;6.68e-24;33!CL:0000576;2.06e-19;48!CL:0000766;1.86e-15;69!CL:0000094;2.89e-09;8!CL:0000763;5.20e-08;100!CL:0000235;1.27e-07;6 | |ontology_enrichment_celltype_v019=CL:0000473;2.18e-25;39!CL:0000234;2.18e-25;39!CL:0000860;6.68e-24;33!CL:0002057;6.68e-24;33!CL:0000576;2.06e-19;48!CL:0000766;1.86e-15;69!CL:0000094;2.89e-09;8!CL:0000763;5.20e-08;100!CL:0000235;1.27e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.87e-38,72;CL:0002194,1.09e-34,59;CL:0000576,1.09e-34,59;CL:0000040,1.09e-34,59;CL:0000559,1.09e-34,59;CL:0002009,2.57e-34,61;CL:0000473,7.05e-34,48;CL:0000234,7.05e-34,48;CL:0000557,8.41e-31,67;CL:0000839,4.20e-29,66;CL:0000860,6.84e-28,42;CL:0002057,6.84e-28,42;CL:0000763,4.09e-23,108;CL:0000049,4.09e-23,108;CL:0000738,1.49e-16,136;CL:0002087,1.19e-14,115;CL:0000037,1.91e-12,168;CL:0002031,1.06e-11,120;CL:0002032,2.60e-11,161;CL:0000837,2.60e-11,161;CL:0000988,7.92e-11,177;CL:0000094,2.26e-09,8;CL:0000235,1.46e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;9.20e-21;42!CL:0000049;6.71e-08;108 | |ontology_enrichment_development_v019=CL:0002057;9.20e-21;42!CL:0000049;6.71e-08;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000178;8.18e-11;15!UBERON:0000179;8.18e-11;15!UBERON:0000463;8.18e-11;15!UBERON:0007023;1.93e-08;114 | |ontology_enrichment_uberon_v019=UBERON:0000178;8.18e-11;15!UBERON:0000179;8.18e-11;15!UBERON:0000463;8.18e-11;15!UBERON:0007023;1.93e-08;114 | ||
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| ||
|short_description=p1@ENST00000455981 | |short_description=p1@ENST00000455981 | ||
}} | }} |
Latest revision as of 23:24, 31 July 2015
Short description: | p1@ENST00000455981 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000455981_5end |
Coexpression cluster: | C1003_CD14_Whole_Neutrophils_Macrophage_Eosinophils_blood_CD14CD16 |
Association with transcript: | 0bp_to_ENST00000455981_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.87e-38 | 72 |
monopoietic cell | 1.09e-34 | 59 |
monocyte | 1.09e-34 | 59 |
monoblast | 1.09e-34 | 59 |
promonocyte | 1.09e-34 | 59 |
macrophage dendritic cell progenitor | 2.57e-34 | 61 |
defensive cell | 7.05e-34 | 48 |
phagocyte | 7.05e-34 | 48 |
granulocyte monocyte progenitor cell | 8.41e-31 | 67 |
myeloid lineage restricted progenitor cell | 4.20e-29 | 66 |
classical monocyte | 6.84e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.84e-28 | 42 |
myeloid cell | 4.09e-23 | 108 |
common myeloid progenitor | 4.09e-23 | 108 |
leukocyte | 1.49e-16 | 136 |
nongranular leukocyte | 1.19e-14 | 115 |
hematopoietic stem cell | 1.91e-12 | 168 |
hematopoietic lineage restricted progenitor cell | 1.06e-11 | 120 |
hematopoietic oligopotent progenitor cell | 2.60e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.60e-11 | 161 |
hematopoietic cell | 7.92e-11 | 177 |
granulocyte | 2.26e-09 | 8 |
macrophage | 1.46e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.69e-35 | 98 |
blood island | 5.69e-35 | 98 |
adult organism | 1.23e-34 | 114 |
hemolymphoid system | 3.46e-34 | 108 |
bone marrow | 3.70e-26 | 76 |
immune system | 6.15e-25 | 93 |
bone element | 6.37e-23 | 82 |
skeletal element | 2.53e-19 | 90 |
skeletal system | 1.05e-15 | 100 |
lateral plate mesoderm | 2.48e-15 | 203 |
blood | 6.03e-11 | 15 |
haemolymphatic fluid | 6.03e-11 | 15 |
organism substance | 6.03e-11 | 15 |
developing anatomical structure | 3.63e-09 | 581 |
embryonic structure | 1.08e-08 | 564 |
germ layer | 1.16e-08 | 560 |
germ layer / neural crest | 1.16e-08 | 560 |
embryonic tissue | 1.16e-08 | 560 |
presumptive structure | 1.16e-08 | 560 |
germ layer / neural crest derived structure | 1.16e-08 | 560 |
epiblast (generic) | 1.16e-08 | 560 |
embryo | 1.16e-08 | 592 |
mesoderm | 3.87e-08 | 315 |
mesoderm-derived structure | 3.87e-08 | 315 |
presumptive mesoderm | 3.87e-08 | 315 |