FFCP PHASE1:Hg19::chr5:77844998..77845010,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10184 | |EntrezGene=10184 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6588 | |HGNC=6588 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-24bp_to_ENST00000515007_5end | |association_with_transcript=-24bp_to_ENST00000515007_5end | ||
|cluster_id=chr5:77844998..77845010,- | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_16_at_LHFPL2_5end | |description=CAGE_peak_16_at_LHFPL2_5end | ||
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|ontology_enrichment_celltype=CL:0002194!8.76e-57!63;CL:0000576!8.76e-57!63;CL:0000040!8.76e-57!63;CL:0000559!8.76e-57!63;CL:0002057!6.04e-56!42;CL:0002009!9.93e-55!65;CL:0000860!1.29e-51!45;CL:0000839!4.22e-50!70;CL:0000557!2.97e-49!71;CL:0000766!7.20e-48!76;CL:0000763!2.13e-36!112;CL:0000049!2.13e-36!112;CL:0002087!3.06e-25!119;CL:0002031!8.26e-24!124;CL:0000738!3.46e-21!140;CL:0002032!4.78e-21!165;CL:0000837!4.78e-21!165;CL:0000037!9.86e-20!172;CL:0000566!9.86e-20!172;CL:0000988!4.93e-18!182;CL:0000134!6.11e-07!358 | |ontology_enrichment_celltype=CL:0002194!8.76e-57!63;CL:0000576!8.76e-57!63;CL:0000040!8.76e-57!63;CL:0000559!8.76e-57!63;CL:0002057!6.04e-56!42;CL:0002009!9.93e-55!65;CL:0000860!1.29e-51!45;CL:0000839!4.22e-50!70;CL:0000557!2.97e-49!71;CL:0000766!7.20e-48!76;CL:0000763!2.13e-36!112;CL:0000049!2.13e-36!112;CL:0002087!3.06e-25!119;CL:0002031!8.26e-24!124;CL:0000738!3.46e-21!140;CL:0002032!4.78e-21!165;CL:0000837!4.78e-21!165;CL:0000037!9.86e-20!172;CL:0000566!9.86e-20!172;CL:0000988!4.93e-18!182;CL:0000134!6.11e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.95e-80;33!CL:0002057;1.95e-80;33!CL:0000473;9.94e-53;39!CL:0000234;9.94e-53;39!CL:0000576;7.97e-43;48!CL:0000766;9.53e-20;69!CL:0000840;6.12e-15;5!CL:0000763;6.90e-11;100!CL:0002087;1.78e-10;104!CL:0000990;3.81e-10;8!CL:0000738;1.13e-08;136!CL:0000451;2.16e-08;10 | |ontology_enrichment_celltype_v019=CL:0000860;1.95e-80;33!CL:0002057;1.95e-80;33!CL:0000473;9.94e-53;39!CL:0000234;9.94e-53;39!CL:0000576;7.97e-43;48!CL:0000766;9.53e-20;69!CL:0000840;6.12e-15;5!CL:0000763;6.90e-11;100!CL:0002087;1.78e-10;104!CL:0000990;3.81e-10;8!CL:0000738;1.13e-08;136!CL:0000451;2.16e-08;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.67e-70,42;CL:0002057,2.67e-70,42;CL:0002194,8.43e-67,59;CL:0000576,8.43e-67,59;CL:0000040,8.43e-67,59;CL:0000559,8.43e-67,59;CL:0002009,1.45e-64,61;CL:0000473,3.30e-61,48;CL:0000234,3.30e-61,48;CL:0000839,1.48e-59,66;CL:0000557,1.22e-58,67;CL:0000766,1.89e-54,72;CL:0000763,1.35e-35,108;CL:0000049,1.35e-35,108;CL:0002087,2.77e-33,115;CL:0002031,8.50e-32,120;CL:0000738,9.17e-28,136;CL:0002032,4.74e-23,161;CL:0000837,4.74e-23,161;CL:0000037,5.58e-22,168;CL:0000988,1.00e-20,177;CL:0000840,6.12e-15,5;CL:0001029,6.12e-15,5;CL:0000990,3.81e-10,8;CL:0000134,6.59e-09,354;CL:0002320,1.13e-08,361;CL:0000451,2.16e-08,10;CL:0000219,7.44e-08,386;CL:0000048,7.57e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;2.25e-51;42!CL:0000049;9.82e-10;108 | |ontology_enrichment_development_v019=CL:0002057;2.25e-51;42!CL:0000049;9.82e-10;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.45e-42!80;UBERON:0001474!7.03e-39!86;UBERON:0002390!8.65e-35!102;UBERON:0003061!8.65e-35!102;UBERON:0004765!1.66e-33!101;UBERON:0001434!1.66e-33!101;UBERON:0002193!1.41e-32!112;UBERON:0002405!1.94e-31!115;UBERON:0002204!2.58e-18!167;UBERON:0003081!1.57e-12!216;UBERON:0002619!1.41e-07!22;UBERON:0000062!1.62e-07!511;UBERON:0002791!5.86e-07!33;UBERON:0001950!9.92e-07!20 | |ontology_enrichment_uberon=UBERON:0002371!1.45e-42!80;UBERON:0001474!7.03e-39!86;UBERON:0002390!8.65e-35!102;UBERON:0003061!8.65e-35!102;UBERON:0004765!1.66e-33!101;UBERON:0001434!1.66e-33!101;UBERON:0002193!1.41e-32!112;UBERON:0002405!1.94e-31!115;UBERON:0002204!2.58e-18!167;UBERON:0003081!1.57e-12!216;UBERON:0002619!1.41e-07!22;UBERON:0000062!1.62e-07!511;UBERON:0002791!5.86e-07!33;UBERON:0001950!9.92e-07!20 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.74e-51,76;UBERON:0001474,1.41e-47,82;UBERON:0004765,3.66e-43,90;UBERON:0002405,1.06e-41,93;UBERON:0002390,1.84e-39,98;UBERON:0003061,1.84e-39,98;UBERON:0001434,1.26e-38,100;UBERON:0002193,1.35e-35,108;UBERON:0002204,3.97e-22,167;UBERON:0003081,1.01e-17,203;UBERON:0000926,2.18e-10,315;UBERON:0004120,2.18e-10,315;UBERON:0006603,2.18e-10,315;UBERON:0002384,2.34e-08,371 | |||
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| ||
|short_description=p16@LHFPL2 | |short_description=p16@LHFPL2 | ||
}} | }} |
Latest revision as of 20:36, 18 September 2015
Short description: | p16@LHFPL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_LHFPL2_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -24bp_to_ENST00000515007_5end |
EntrezGene: | LHFPL2 |
HGNC: | 6588 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.74e-51 | 76 |
bone element | 1.41e-47 | 82 |
skeletal element | 3.66e-43 | 90 |
immune system | 1.06e-41 | 93 |
hematopoietic system | 1.84e-39 | 98 |
blood island | 1.84e-39 | 98 |
skeletal system | 1.26e-38 | 100 |
hemolymphoid system | 1.35e-35 | 108 |
musculoskeletal system | 3.97e-22 | 167 |
lateral plate mesoderm | 1.01e-17 | 203 |
mesoderm | 2.18e-10 | 315 |
mesoderm-derived structure | 2.18e-10 | 315 |
presumptive mesoderm | 2.18e-10 | 315 |
connective tissue | 2.34e-08 | 371 |