FFCP PHASE1:Hg19::chr17:48625415..48625430,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64847 | |EntrezGene=64847 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26125 | |HGNC=26125 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000505336_5end | |association_with_transcript=0bp_to_ENST00000505336_5end | ||
|cluster_id=chr17:48625415..48625430,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_5_at_SPATA20_5end | |description=CAGE_peak_5_at_SPATA20_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002550!8.17e-10!1 | |ontology_enrichment_celltype=CL:0002550!8.17e-10!1 | ||
|ontology_enrichment_celltype_v019=CL:0002593;9.18e-26;2!CL:0002595;3.60e-11;5 | |ontology_enrichment_celltype_v019=CL:0002593;9.18e-26;2!CL:0002595;3.60e-11;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002593,9.18e-26,2;CL:0002595,3.60e-11,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | |ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007029!5.31e-10!1;UBERON:0001301!1.15e-09!1;UBERON:0002363!2.67e-09!1;UBERON:0007647!2.67e-09!1;UBERON:0010115!2.67e-09!1;UBERON:0003135!1.37e-07!11 | |ontology_enrichment_uberon=UBERON:0007029!5.31e-10!1;UBERON:0001301!1.15e-09!1;UBERON:0002363!2.67e-09!1;UBERON:0007647!2.67e-09!1;UBERON:0010115!2.67e-09!1;UBERON:0003135!1.37e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0002456;9.18e-26;2!UBERON:0003135;4.28e-19;11!UBERON:0003834;3.60e-11;5!UBERON:0001533;3.60e-11;5!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22!UBERON:0003513;2.35e-08;7 | |ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0002456;9.18e-26;2!UBERON:0003135;4.28e-19;11!UBERON:0003834;3.60e-11;5!UBERON:0001533;3.60e-11;5!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22!UBERON:0003513;2.35e-08;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0002456,9.18e-26,2;UBERON:0003135,4.28e-19,11;UBERON:0003834,3.60e-11,5;UBERON:0001533,3.60e-11,5;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22;UBERON:0003513,2.35e-08,7 | |||
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|short_description=p5@SPATA20 | |short_description=p5@SPATA20 | ||
}} | }} |
Latest revision as of 03:08, 16 September 2015
Short description: | p5@SPATA20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SPATA20_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000505336_5end |
EntrezGene: | SPATA20 |
HGNC: | 26125 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 9.18e-26 | 2 |
smooth muscle cell of the subclavian artery | 3.60e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
internal thoracic artery | 9.18e-26 | 2 |
male reproductive organ | 4.28e-19 | 11 |
thoracic segment blood vessel | 3.60e-11 | 5 |
subclavian artery | 3.60e-11 | 5 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |
trunk blood vessel | 2.35e-08 | 7 |