FFCP PHASE1:Hg19::chr10:105668282..105668301,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:105668282..105668301,+ | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_at_chr10:105668282..105668301,+ | |description=CAGE_peak_at_chr10:105668282..105668301,+ | ||
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|ontology_enrichment_celltype=CL:0002057!4.63e-14!42;CL:0000860!8.71e-13!45;CL:0002594!5.90e-10!4;CL:0002194!1.11e-09!63;CL:0000576!1.11e-09!63;CL:0000040!1.11e-09!63;CL:0000559!1.11e-09!63;CL:0002009!3.15e-09!65;CL:0000766!3.36e-09!76;CL:0000839!3.23e-08!70;CL:0000557!4.94e-08!71;CL:0000048!1.13e-07!430;CL:0000723!2.37e-07!436;CL:0000034!6.12e-07!444 | |ontology_enrichment_celltype=CL:0002057!4.63e-14!42;CL:0000860!8.71e-13!45;CL:0002594!5.90e-10!4;CL:0002194!1.11e-09!63;CL:0000576!1.11e-09!63;CL:0000040!1.11e-09!63;CL:0000559!1.11e-09!63;CL:0002009!3.15e-09!65;CL:0000766!3.36e-09!76;CL:0000839!3.23e-08!70;CL:0000557!4.94e-08!71;CL:0000048!1.13e-07!430;CL:0000723!2.37e-07!436;CL:0000034!6.12e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.23e-39;33!CL:0002057;2.23e-39;33!CL:0000473;1.19e-28;39!CL:0000234;1.19e-28;39!CL:0000576;1.86e-22;48!CL:0002262;3.42e-10;2!CL:1000398;3.42e-10;2!CL:0000766;1.27e-09;69 | |ontology_enrichment_celltype_v019=CL:0000860;2.23e-39;33!CL:0002057;2.23e-39;33!CL:0000473;1.19e-28;39!CL:0000234;1.19e-28;39!CL:0000576;1.86e-22;48!CL:0002262;3.42e-10;2!CL:1000398;3.42e-10;2!CL:0000766;1.27e-09;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.97e-34,42;CL:0002057,2.97e-34,42;CL:0000473,6.30e-30,48;CL:0000234,6.30e-30,48;CL:0002194,7.34e-24,59;CL:0000576,7.34e-24,59;CL:0000040,7.34e-24,59;CL:0000559,7.34e-24,59;CL:0002009,4.46e-23,61;CL:0000839,2.54e-21,66;CL:0000557,5.32e-21,67;CL:0000766,1.57e-19,72;CL:0000763,6.65e-13,108;CL:0000049,6.65e-13,108;CL:0002087,4.34e-12,115;CL:0002031,1.45e-11,120;CL:0002262,3.27e-10,2;CL:1000398,3.27e-10,2;CL:0000738,3.86e-10,136;CL:0002032,1.80e-08,161;CL:0000837,1.80e-08,161;CL:0000037,4.31e-08,168;CL:0000988,1.20e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.68e-26;42 | |ontology_enrichment_development_v019=CL:0002057;2.68e-26;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001310!5.90e-10!4;UBERON:0003081!7.27e-09!216;UBERON:0002204!9.75e-09!167;UBERON:0002390!2.19e-08!102;UBERON:0003061!2.19e-08!102;UBERON:0002371!2.26e-08!80;UBERON:0001474!3.37e-08!86;UBERON:0002193!4.43e-07!112 | |ontology_enrichment_uberon=UBERON:0001310!5.90e-10!4;UBERON:0003081!7.27e-09!216;UBERON:0002204!9.75e-09!167;UBERON:0002390!2.19e-08!102;UBERON:0003061!2.19e-08!102;UBERON:0002371!2.26e-08!80;UBERON:0001474!3.37e-08!86;UBERON:0002193!4.43e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0001281;3.42e-10;2!UBERON:0003497;3.42e-10;2!UBERON:0003909;3.42e-10;2!UBERON:0003835;3.42e-10;2!UBERON:0001280;3.25e-07;3!UBERON:0004647;3.25e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0001281;3.42e-10;2!UBERON:0003497;3.42e-10;2!UBERON:0003909;3.42e-10;2!UBERON:0003835;3.42e-10;2!UBERON:0001280;3.25e-07;3!UBERON:0004647;3.25e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.22e-23,76;UBERON:0001474,4.00e-21,82;UBERON:0004765,3.21e-19,90;UBERON:0002405,1.37e-18,93;UBERON:0002390,1.27e-17,98;UBERON:0003061,1.27e-17,98;UBERON:0001434,2.92e-17,100;UBERON:0002193,5.97e-16,108;UBERON:0001281,3.27e-10,2;UBERON:0003497,3.27e-10,2;UBERON:0003909,3.27e-10,2;UBERON:0003835,3.27e-10,2;UBERON:0002204,4.09e-10,167;UBERON:0003081,4.95e-10,203;UBERON:0001280,3.16e-07,3;UBERON:0004647,3.16e-07,3;UBERON:0005171,3.16e-07,3 | |||
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|short_description=p@chr10:105668282..105668301,+ | |short_description=p@chr10:105668282..105668301,+ | ||
}} | }} |
Latest revision as of 10:03, 23 July 2015
Short description: | p@chr10:105668282..105668301, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:105668282..105668301, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.97e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.97e-34 | 42 |
defensive cell | 6.30e-30 | 48 |
phagocyte | 6.30e-30 | 48 |
monopoietic cell | 7.34e-24 | 59 |
monocyte | 7.34e-24 | 59 |
monoblast | 7.34e-24 | 59 |
promonocyte | 7.34e-24 | 59 |
macrophage dendritic cell progenitor | 4.46e-23 | 61 |
myeloid lineage restricted progenitor cell | 2.54e-21 | 66 |
granulocyte monocyte progenitor cell | 5.32e-21 | 67 |
myeloid leukocyte | 1.57e-19 | 72 |
myeloid cell | 6.65e-13 | 108 |
common myeloid progenitor | 6.65e-13 | 108 |
nongranular leukocyte | 4.34e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.45e-11 | 120 |
endothelial cell of sinusoid | 3.27e-10 | 2 |
endothelial cell of hepatic sinusoid | 3.27e-10 | 2 |
leukocyte | 3.86e-10 | 136 |
hematopoietic oligopotent progenitor cell | 1.80e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.80e-08 | 161 |
hematopoietic stem cell | 4.31e-08 | 168 |
hematopoietic cell | 1.20e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.22e-23 | 76 |
bone element | 4.00e-21 | 82 |
skeletal element | 3.21e-19 | 90 |
immune system | 1.37e-18 | 93 |
hematopoietic system | 1.27e-17 | 98 |
blood island | 1.27e-17 | 98 |
skeletal system | 2.92e-17 | 100 |
hemolymphoid system | 5.97e-16 | 108 |
hepatic sinusoid | 3.27e-10 | 2 |
abdomen blood vessel | 3.27e-10 | 2 |
sinusoid | 3.27e-10 | 2 |
abdominal segment blood vessel | 3.27e-10 | 2 |
musculoskeletal system | 4.09e-10 | 167 |
lateral plate mesoderm | 4.95e-10 | 203 |
liver parenchyma | 3.16e-07 | 3 |
liver lobule | 3.16e-07 | 3 |
hepatic duct | 3.16e-07 | 3 |