FFCP PHASE1:Mm9::chr9:91263649..91263666,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22774 | |EntrezGene=22774 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1661 | |MCL_coexpression_id=1661 | ||
|TSSclassifier=NA | |||
|UniProt=G3UZ66 | |UniProt=G3UZ66 | ||
|association_with_transcript=0bp_to_ENSMUST00000173054_5end | |association_with_transcript=0bp_to_ENSMUST00000173054_5end | ||
|cluster_id=chr9:91263649..91263666,+ | |||
|description=CAGE_peak_3_at_Zic4_5end | |description=CAGE_peak_3_at_Zic4_5end | ||
|id=chr9:91263649..91263666,+ | |id=chr9:91263649..91263666,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.03e-10!23;CL:0000337!1.03e-10!23;CL:0002319!4.61e-10!43;CL:0000221!1.18e-09!44;CL:0000133!1.18e-09!44;CL:0000055!1.42e-07!50;CL:0002453!9.49e-07!8 | |ontology_enrichment_celltype=CL:0000117!1.03e-10!23;CL:0000337!1.03e-10!23;CL:0002319!4.61e-10!43;CL:0000221!1.18e-09!44;CL:0000133!1.18e-09!44;CL:0000055!1.42e-07!50;CL:0002453!9.49e-07!8 | ||
|ontology_enrichment_celltype_v019_2=CL:0002613,3.94e-12,3;CL:0002319,1.77e-11,43;CL:0002453,2.87e-11,8;CL:0000221,3.68e-11,44;CL:0000133,3.68e-11,44;CL:0000333,5.88e-09,10;CL:0000095,5.88e-09,10;CL:0000243,5.88e-09,10;CL:0000123,5.88e-09,10;CL:0000125,5.88e-09,10;CL:0000030,5.88e-09,10;CL:0000339,5.88e-09,10;CL:0000117,1.44e-08,23;CL:0000337,1.44e-08,23;CL:0000878,2.09e-08,2;CL:0000129,2.09e-08,2;CL:0000708,3.14e-08,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.74e-23!73;UBERON:0005743!8.74e-23!73;UBERON:0000073!1.06e-22!75;UBERON:0001016!1.06e-22!75;UBERON:0000033!1.47e-21!63;UBERON:0001049!5.90e-21!52;UBERON:0005068!5.90e-21!52;UBERON:0006241!5.90e-21!52;UBERON:0007135!5.90e-21!52;UBERON:0000955!1.10e-20!50;UBERON:0006238!1.10e-20!50;UBERON:0002616!4.52e-20!49;UBERON:0002346!8.72e-19!71;UBERON:0003075!8.72e-19!71;UBERON:0007284!8.72e-19!71;UBERON:0004121!1.62e-18!102;UBERON:0000924!1.62e-18!102;UBERON:0006601!1.62e-18!102;UBERON:0003056!2.69e-16!49;UBERON:0003080!3.30e-13!40;UBERON:0002780!7.70e-13!39;UBERON:0001890!7.70e-13!39;UBERON:0006240!7.70e-13!39;UBERON:0007811!4.98e-12!86;UBERON:0000153!6.78e-10!94;UBERON:0002020!3.44e-09!34;UBERON:0003076!5.56e-09!12;UBERON:0003057!5.56e-09!12;UBERON:0001894!1.53e-07!10;UBERON:0006222!1.53e-07!10;UBERON:0002791!2.88e-07!29;UBERON:0003528!2.88e-07!29;UBERON:0001893!2.88e-07!29 | |ontology_enrichment_uberon=UBERON:0001017!8.74e-23!73;UBERON:0005743!8.74e-23!73;UBERON:0000073!1.06e-22!75;UBERON:0001016!1.06e-22!75;UBERON:0000033!1.47e-21!63;UBERON:0001049!5.90e-21!52;UBERON:0005068!5.90e-21!52;UBERON:0006241!5.90e-21!52;UBERON:0007135!5.90e-21!52;UBERON:0000955!1.10e-20!50;UBERON:0006238!1.10e-20!50;UBERON:0002616!4.52e-20!49;UBERON:0002346!8.72e-19!71;UBERON:0003075!8.72e-19!71;UBERON:0007284!8.72e-19!71;UBERON:0004121!1.62e-18!102;UBERON:0000924!1.62e-18!102;UBERON:0006601!1.62e-18!102;UBERON:0003056!2.69e-16!49;UBERON:0003080!3.30e-13!40;UBERON:0002780!7.70e-13!39;UBERON:0001890!7.70e-13!39;UBERON:0006240!7.70e-13!39;UBERON:0007811!4.98e-12!86;UBERON:0000153!6.78e-10!94;UBERON:0002020!3.44e-09!34;UBERON:0003076!5.56e-09!12;UBERON:0003057!5.56e-09!12;UBERON:0001894!1.53e-07!10;UBERON:0006222!1.53e-07!10;UBERON:0002791!2.88e-07!29;UBERON:0003528!2.88e-07!29;UBERON:0001893!2.88e-07!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.32e-14,73;UBERON:0001016,1.87e-13,75;UBERON:0000073,3.14e-10,54;UBERON:0004121,7.67e-10,95;UBERON:0000924,7.67e-10,95;UBERON:0006601,7.67e-10,95;UBERON:0001049,3.40e-09,52;UBERON:0005068,3.40e-09,52;UBERON:0006241,3.40e-09,52;UBERON:0007135,3.40e-09,52;UBERON:0002616,4.82e-09,46;UBERON:0002037,6.19e-09,4;UBERON:0002680,6.19e-09,4;UBERON:0001895,6.19e-09,4;UBERON:0010092,6.19e-09,4;UBERON:0006215,6.19e-09,4;UBERON:0000955,8.38e-09,47;UBERON:0006238,8.38e-09,47;UBERON:0003210,3.14e-08,2;UBERON:0002420,1.60e-07,8;UBERON:0007245,1.60e-07,8;UBERON:0010009,1.60e-07,8;UBERON:0010011,1.60e-07,8;UBERON:0000454,1.60e-07,8;UBERON:0000369,1.97e-07,5;UBERON:0002435,1.97e-07,5;UBERON:0000204,1.97e-07,5;UBERON:0010082,1.97e-07,5;UBERON:0002346,5.26e-07,64;UBERON:0003075,5.26e-07,64;UBERON:0007284,5.26e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.04152209913235,0.218025156380447,0.439372365468944,1.74986909166855,1.53985063787899,0,0,0,0,0,0,0,1.21389876515759,0.528990979272033,1.26766280701236,1.69422266034566,4.4464739805557,0,0,0,3.29560121570245,3.45796474789399,0.207379224616955,0.270011876663381,0,0.285650984403804,0.220868540951614,0,0.191690942036473,0,1.10115880999389,0.510749352340751,0.153606533256243,4.48413378282659,5.30628332893976,3.64639359389732,0,1.12552522006336,0.61119299110724,0,0.996601765593721,1.67759501242771,0.151452386666368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34224637609238,2.09446706813455,0,0,0,0,0.149790639404823,0.457500602818626,0.251308704225729,0.695297280769106,1.02286182932132,0.20778804455956,0.648965052271031,0,0,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0.150704817835715,0.204109497453984,0.2562274405697,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,1.85228302282712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.703270119553219,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.776152102696527,0.643011105094777,1.06404140185364,2.49716344642899,1.81003922662333,0.304464949114599,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.515559547031063,0,0.755393897389701,0,0,0,0,1.3492355185943,0.798049746802062,1.02440163452481,0.486213434136588,0.628839487883947,0,0.888986911206461,0.206035057238894,0.320919209591815,0.252697211763798,0,0.188626341386076,0.561849044819294,0.768301828858431,0.918967503289812,0,0.579421629724277,0.578727661391115,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.436039249896986,0.376437521661322,0.592302255241736,0.365855945745545,0.263069711437843,0.543216455383447,1.12228454331548,0.474540072496697,0.492522411877817,0.409231043169689,0.154936841185966,0.385813221962283,1.49886346762768,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.04152209913235,0.218025156380447,0.439372365468944,1.74986909166855,1.53985063787899,0,0,0,0,0,0,0,1.21389876515759,0.528990979272033,1.26766280701236,1.69422266034566,4.4464739805557,0,0,0,3.29560121570245,3.45796474789399,0.207379224616955,0.270011876663381,0,0.285650984403804,0.220868540951614,0,0.191690942036473,0,1.10115880999389,0.510749352340751,0.153606533256243,4.48413378282659,5.30628332893976,3.64639359389732,0,1.12552522006336,0.61119299110724,0,0.996601765593721,1.67759501242771,0.151452386666368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34224637609238,2.09446706813455,0,0,0,0,0.149790639404823,0.457500602818626,0.251308704225729,0.695297280769106,1.02286182932132,0.20778804455956,0.648965052271031,0,0,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0.150704817835715,0.204109497453984,0.2562274405697,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,1.85228302282712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.703270119553219,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.776152102696527,0.643011105094777,1.06404140185364,2.49716344642899,1.81003922662333,0.304464949114599,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.515559547031063,0,0.755393897389701,0,0,0,0,1.3492355185943,0.798049746802062,1.02440163452481,0.486213434136588,0.628839487883947,0,0.888986911206461,0.206035057238894,0.320919209591815,0.252697211763798,0,0.188626341386076,0.561849044819294,0.768301828858431,0.918967503289812,0,0.579421629724277,0.578727661391115,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.436039249896986,0.376437521661322,0.592302255241736,0.365855945745545,0.263069711437843,0.543216455383447,1.12228454331548,0.474540072496697,0.492522411877817,0.409231043169689,0.154936841185966,0.385813221962283,1.49886346762768,0.233931608445408,0,0,0,0 | ||
|short_description=p3@Zic4 | |short_description=p3@Zic4 | ||
}} | }} |
Latest revision as of 06:12, 27 September 2015
Short description: | p3@Zic4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Zic4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1661 |
Association with transcript: | 0bp_to_ENSMUST00000173054_5end |
EntrezGene: | Zic4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 3.94e-12 | 3 |
neural cell | 1.77e-11 | 43 |
oligodendrocyte precursor cell | 2.87e-11 | 8 |
ectodermal cell | 3.68e-11 | 44 |
neurectodermal cell | 3.68e-11 | 44 |
migratory neural crest cell | 5.88e-09 | 10 |
neuron associated cell | 5.88e-09 | 10 |
glial cell (sensu Vertebrata) | 5.88e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 5.88e-09 | 10 |
glial cell | 5.88e-09 | 10 |
glioblast | 5.88e-09 | 10 |
glioblast (sensu Vertebrata) | 5.88e-09 | 10 |
CNS neuron (sensu Vertebrata) | 1.44e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.44e-08 | 23 |
central nervous system macrophage | 2.09e-08 | 2 |
microglial cell | 2.09e-08 | 2 |
leptomeningeal cell | 3.14e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 6.32e-14 | 73 |
nervous system | 1.87e-13 | 75 |
regional part of nervous system | 3.14e-10 | 54 |
ectoderm-derived structure | 7.67e-10 | 95 |
ectoderm | 7.67e-10 | 95 |
presumptive ectoderm | 7.67e-10 | 95 |
neural tube | 3.40e-09 | 52 |
neural rod | 3.40e-09 | 52 |
future spinal cord | 3.40e-09 | 52 |
neural keel | 3.40e-09 | 52 |
regional part of brain | 4.82e-09 | 46 |
cerebellum | 6.19e-09 | 4 |
regional part of metencephalon | 6.19e-09 | 4 |
metencephalon | 6.19e-09 | 4 |
future metencephalon | 6.19e-09 | 4 |
rhombic lip | 6.19e-09 | 4 |
brain | 8.38e-09 | 47 |
future brain | 8.38e-09 | 47 |
blood-cerebrospinal fluid barrier | 3.14e-08 | 2 |
basal ganglion | 1.60e-07 | 8 |
nuclear complex of neuraxis | 1.60e-07 | 8 |
aggregate regional part of brain | 1.60e-07 | 8 |
collection of basal ganglia | 1.60e-07 | 8 |
cerebral subcortex | 1.60e-07 | 8 |
corpus striatum | 1.97e-07 | 5 |
striatum | 1.97e-07 | 5 |
ventral part of telencephalon | 1.97e-07 | 5 |
future corpus striatum | 1.97e-07 | 5 |
neurectoderm | 5.26e-07 | 64 |
neural plate | 5.26e-07 | 64 |
presumptive neural plate | 5.26e-07 | 64 |