FFCP PHASE1:Hg19::chr2:74517459..74517491,-: Difference between revisions
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|id=chr2:74517459..74517491,-
|short_description=p1@SLC4A5
|description=CAGE_peak_1_at_SLC4A5_5end
|association_with_transcript=340bp_to_ENST00000432728_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57835 | |EntrezGene=57835 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18168 | |HGNC=18168 | ||
|TSSclassifier=strong | |||
|UniProt=C9JNL6 | |UniProt=C9JNL6 | ||
|association_with_transcript=340bp_to_ENST00000432728_5end | |||
|cluster_id=chr2:74517459..74517491,- | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_1_at_SLC4A5_5end | |||
|id=chr2:74517459..74517491,- | |||
|ontology_enrichment_celltype=CL:0002586!6.62e-15!3;CL:0000149!2.67e-11!4;CL:0000147!4.20e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0002586;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,8.62e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.97e-14;5!UBERON:0003056;5.80e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000966!1.05e-15!5;UBERON:0005388!1.05e-15!5;UBERON:0001802!1.05e-15!5;UBERON:0001896!1.52e-15!3;UBERON:0005290!1.52e-15!3;UBERON:0010096!1.52e-15!3;UBERON:0001781!6.62e-15!3;UBERON:0001782!6.62e-15!3;UBERON:0005424!6.62e-15!3;UBERON:0005743!1.36e-14!86;UBERON:0000073!2.14e-14!94;UBERON:0001016!2.14e-14!94;UBERON:0000153!2.70e-13!129;UBERON:0007811!2.70e-13!129;UBERON:0003075!1.44e-11!86;UBERON:0007284!1.44e-11!86;UBERON:0002346!6.82e-11!90;UBERON:0000341!8.55e-11!2;UBERON:0003127!5.84e-10!2;UBERON:0003056!9.78e-10!61;UBERON:0007023!5.39e-09!115;UBERON:0001017!5.47e-09!82;UBERON:0000033!5.81e-09!123;UBERON:0004121!7.45e-09!169;UBERON:0000924!1.54e-08!173;UBERON:0006601!1.54e-08!173;UBERON:0000955!3.62e-08!69;UBERON:0006238!3.62e-08!69;UBERON:0000970!5.43e-08!20;UBERON:0000974!1.29e-07!10;UBERON:0002104!1.40e-07!21;UBERON:0001049!1.69e-07!57;UBERON:0005068!1.69e-07!57;UBERON:0006241!1.69e-07!57;UBERON:0007135!1.69e-07!57;UBERON:0002616!3.52e-07!59;UBERON:0009722!5.12e-07!11;UBERON:0007690!5.12e-07!11;UBERON:0007625!6.81e-07!11;UBERON:0000020!7.28e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;5.63e-50;3!UBERON:0005290;5.63e-50;3!UBERON:0000341;1.27e-33;2!UBERON:0002298;2.05e-25;6!UBERON:0002336;1.33e-17;1!UBERON:0011215;1.33e-17;1!UBERON:0001018;1.33e-17;1!UBERON:0002473;1.33e-17;1!UBERON:0005340;1.33e-17;1!UBERON:0003544;1.33e-17;1!UBERON:0005970;1.33e-17;1!UBERON:0002316;1.33e-17;1!UBERON:0001020;1.33e-17;1!UBERON:0002437;1.33e-17;1!UBERON:0002046;1.97e-14;5!UBERON:0000966;2.41e-14;5!UBERON:0005388;2.41e-14;5!UBERON:0001802;2.41e-14;5!UBERON:0004733;4.63e-13;12!UBERON:0002028;4.63e-13;12!UBERON:0004732;4.18e-12;13!UBERON:0000974;6.52e-12;6!UBERON:0002360;1.78e-09;2!UBERON:0005162;1.78e-09;2!UBERON:0000122;1.78e-09;2!UBERON:0000094;1.78e-09;2!UBERON:0010743;1.78e-09;2!UBERON:0000970;3.95e-08;20!UBERON:0002104;9.08e-08;21!UBERON:0000020;3.87e-07;23!UBERON:0001032;7.32e-07;24!UBERON:0004456;7.32e-07;24!UBERON:0001781;8.62e-07;3!UBERON:0001782;8.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,4.38e-50,3;UBERON:0005290,4.38e-50,3;UBERON:0010096,4.38e-50,3;UBERON:0000341,1.64e-33,2;UBERON:0002298,1.81e-25,6;UBERON:0002336,1.22e-17,1;UBERON:0011215,1.22e-17,1;UBERON:0001018,1.22e-17,1;UBERON:0002473,1.22e-17,1;UBERON:0005340,1.22e-17,1;UBERON:0003544,1.22e-17,1;UBERON:0005970,1.22e-17,1;UBERON:0002316,1.22e-17,1;UBERON:0001020,1.22e-17,1;UBERON:0002437,1.22e-17,1;UBERON:0002046,1.97e-14,5;UBERON:0004117,1.97e-14,5;UBERON:0007689,1.97e-14,5;UBERON:0007123,1.97e-14,5;UBERON:0003091,1.97e-14,5;UBERON:0004733,4.36e-13,12;UBERON:0002028,4.36e-13,12;UBERON:0007277,4.36e-13,12;UBERON:0004732,3.95e-12,13;UBERON:0000966,4.07e-12,6;UBERON:0005388,4.07e-12,6;UBERON:0001802,4.07e-12,6;UBERON:0003076,1.36e-10,15;UBERON:0003057,1.36e-10,15;UBERON:0005162,1.71e-09,2;UBERON:0000122,1.71e-09,2;UBERON:0002360,1.86e-09,2;UBERON:0000094,1.86e-09,2;UBERON:0010743,1.86e-09,2;UBERON:0007023,1.04e-08,114;UBERON:0000970,9.08e-08,21;UBERON:0002104,9.08e-08,21;UBERON:0000974,1.73e-07,10;UBERON:0010314,2.01e-07,132;UBERON:0009722,4.71e-07,11;UBERON:0007690,4.71e-07,11;UBERON:0003075,5.44e-07,82;UBERON:0007284,5.44e-07,82;UBERON:0000020,7.32e-07,24;UBERON:0001032,7.32e-07,24;UBERON:0004456,7.32e-07,24;UBERON:0001782,8.62e-07,3;UBERON:0005424,8.62e-07,3 | |||
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|short_description=p1@SLC4A5 | |||
}} | }} |
Latest revision as of 10:31, 18 September 2015
Short description: | p1@SLC4A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC4A5_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 340bp_to_ENST00000432728_5end |
EntrezGene: | SLC4A5 |
HGNC: | 18168 |
UniProt: | C9JNL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 8.62e-07 | 3 |