FFCP PHASE1:Hg19::chr3:133486900..133486913,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:133486900..133486913,+
|short_description=p6@TF
|description=CAGE_peak_6_at_TF_5end
|association_with_transcript=24bp_to_ENST00000462495_5end
|EntrezGene=...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7018 | |EntrezGene=7018 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11740 | |HGNC=11740 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=24bp_to_ENST00000462495_5end | |||
|cluster_id=chr3:133486900..133486913,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_6_at_TF_5end | |||
|id=chr3:133486900..133486913,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.13e-10!12;CL:0000417!1.13e-10!12;CL:0000668!1.13e-10!12;CL:0000414!1.13e-10!12;CL:0000412!1.13e-10!12;CL:0000182!1.13e-10!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.92e-26;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.92e-26,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.16e-20;11!UBERON:0009497;4.21e-17;13!UBERON:0006222;5.79e-10;1!UBERON:0001041;2.58e-07;30!UBERON:0003104;4.48e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.52e-62!57;UBERON:0005068!9.52e-62!57;UBERON:0006241!9.52e-62!57;UBERON:0007135!9.52e-62!57;UBERON:0002616!1.25e-48!59;UBERON:0005743!5.23e-48!86;UBERON:0001017!5.36e-48!82;UBERON:0003075!7.35e-46!86;UBERON:0007284!7.35e-46!86;UBERON:0000955!1.29e-45!69;UBERON:0006238!1.29e-45!69;UBERON:0002346!2.02e-43!90;UBERON:0002780!1.12e-42!41;UBERON:0001890!1.12e-42!41;UBERON:0006240!1.12e-42!41;UBERON:0000073!1.22e-42!94;UBERON:0001016!1.22e-42!94;UBERON:0003080!1.57e-41!42;UBERON:0007023!3.37e-41!115;UBERON:0002020!4.55e-40!34;UBERON:0003528!4.55e-40!34;UBERON:0001893!1.42e-39!34;UBERON:0002791!3.84e-37!33;UBERON:0001869!2.55e-34!32;UBERON:0003056!3.83e-29!61;UBERON:0002619!2.01e-28!22;UBERON:0001950!3.63e-27!20;UBERON:0000033!3.92e-27!123;UBERON:0000025!4.09e-26!194;UBERON:0000153!1.82e-25!129;UBERON:0007811!1.82e-25!129;UBERON:0000956!1.02e-24!25;UBERON:0000203!1.02e-24!25;UBERON:0004121!3.60e-21!169;UBERON:0003076!6.40e-21!15;UBERON:0003057!6.40e-21!15;UBERON:0002298!1.08e-20!8;UBERON:0000924!1.82e-20!173;UBERON:0006601!1.82e-20!173;UBERON:0001871!1.08e-19!7;UBERON:0004111!6.45e-19!241;UBERON:0002308!1.21e-17!9;UBERON:0000125!1.21e-17!9;UBERON:0002420!2.34e-17!9;UBERON:0007245!2.34e-17!9;UBERON:0010009!2.34e-17!9;UBERON:0010011!2.34e-17!9;UBERON:0000454!2.34e-17!9;UBERON:0000477!3.70e-16!286;UBERON:0000483!5.53e-16!309;UBERON:0000119!1.01e-15!312;UBERON:0000200!8.66e-14!6;UBERON:0004733!4.44e-13!12;UBERON:0002028!4.44e-13!12;UBERON:0007277!4.44e-13!12;UBERON:0000475!1.60e-12!365;UBERON:0004732!5.43e-12!13;UBERON:0009663!1.00e-11!7;UBERON:0006331!1.49e-11!3;UBERON:0002107!2.93e-11!19;UBERON:0006925!2.93e-11!19;UBERON:0008836!2.93e-11!19;UBERON:0001896!3.78e-11!3;UBERON:0005290!3.78e-11!3;UBERON:0010096!3.78e-11!3;UBERON:0000988!4.97e-11!3;UBERON:0002240!5.50e-11!3;UBERON:0002771!6.30e-11!3;UBERON:0000349!8.15e-11!5;UBERON:0001872!1.96e-10!5;UBERON:0005057!1.12e-09!26;UBERON:0008835!1.61e-09!22;UBERON:0003894!1.61e-09!22;UBERON:0000062!2.95e-09!511;UBERON:0009854!4.86e-09!23;UBERON:0000481!5.68e-09!347;UBERON:0000064!7.96e-09!219;UBERON:0007499!3.37e-08!25;UBERON:0009497!3.37e-08!25;UBERON:0000015!3.37e-08!25;UBERON:0002423!3.37e-08!25;UBERON:0006235!3.37e-08!25;UBERON:0004161!3.37e-08!25;UBERON:0002148!3.56e-08!2;UBERON:0009662!3.56e-08!2;UBERON:0001897!4.70e-08!2;UBERON:0009856!7.94e-08!26;UBERON:0001876!8.73e-08!2;UBERON:0002081!1.14e-07!2;UBERON:0000369!1.28e-07!4;UBERON:0002435!1.28e-07!4;UBERON:0000204!1.28e-07!4;UBERON:0010082!1.28e-07!4;UBERON:0005174!9.65e-07!5;UBERON:0001137!9.65e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.91e-29;19!UBERON:0006925;4.91e-29;19!UBERON:0002298;5.58e-23;6!UBERON:0002423;7.77e-22;25!UBERON:0002148;3.93e-18;2!UBERON:0006331;3.93e-18;2!UBERON:0009662;3.93e-18;2!UBERON:0002365;8.93e-17;31!UBERON:0002330;8.93e-17;31!UBERON:0000125;1.60e-15;9!UBERON:0002308;1.60e-15;9!UBERON:0002368;7.95e-15;33!UBERON:0000988;2.06e-12;3!UBERON:0001896;2.60e-12;3!UBERON:0005290;2.60e-12;3!UBERON:0004733;1.28e-11;12!UBERON:0002028;1.28e-11;12!UBERON:0000949;6.97e-11;43!UBERON:0004732;9.67e-11;13!UBERON:0002038;3.25e-10;1!UBERON:0009661;3.25e-10;1!UBERON:0002950;3.25e-10;1!UBERON:0001891;3.25e-10;1!UBERON:0003112;9.40e-10;1!UBERON:0011158;9.40e-10;1!UBERON:0003128;9.40e-10;1!UBERON:0001703;9.40e-10;1!UBERON:0002241;9.40e-10;1!UBERON:0000073;2.19e-08;53!UBERON:0002616;2.19e-08;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.00e-29,19;UBERON:0006925,5.00e-29,19;UBERON:0008836,5.00e-29,19;UBERON:0008835,6.13e-25,22;UBERON:0003894,6.13e-25,22;UBERON:0009854,8.19e-24,23;UBERON:0002298,4.97e-23,6;UBERON:0007499,7.88e-22,25;UBERON:0009497,7.88e-22,25;UBERON:0000015,7.88e-22,25;UBERON:0002423,7.88e-22,25;UBERON:0006235,7.88e-22,25;UBERON:0004161,7.88e-22,25;UBERON:0009856,5.94e-21,26;UBERON:0002148,4.48e-18,2;UBERON:0006331,4.48e-18,2;UBERON:0009662,4.48e-18,2;UBERON:0002365,2.06e-17,31;UBERON:0002330,2.06e-17,31;UBERON:0000125,1.63e-15,9;UBERON:0002308,1.63e-15,9;UBERON:0002368,2.64e-15,35;UBERON:0003076,3.12e-14,15;UBERON:0003057,3.12e-14,15;UBERON:0001049,1.66e-13,56;UBERON:0005068,1.66e-13,56;UBERON:0006241,1.66e-13,56;UBERON:0007135,1.66e-13,56;UBERON:0001896,2.12e-12,3;UBERON:0005290,2.12e-12,3;UBERON:0010096,2.12e-12,3;UBERON:0000988,2.25e-12,3;UBERON:0011216,3.98e-12,223;UBERON:0000949,1.13e-11,45;UBERON:0004733,1.21e-11,12;UBERON:0002028,1.21e-11,12;UBERON:0007277,1.21e-11,12;UBERON:0000025,1.22e-11,192;UBERON:0000073,1.49e-11,53;UBERON:0002616,1.49e-11,53;UBERON:0004732,9.19e-11,13;UBERON:0001017,1.02e-10,81;UBERON:0000955,1.12e-10,68;UBERON:0006238,1.12e-10,68;UBERON:0007023,1.69e-10,114;UBERON:0002038,3.10e-10,1;UBERON:0009661,3.10e-10,1;UBERON:0002950,3.10e-10,1;UBERON:0001891,3.10e-10,1;UBERON:0009616,3.10e-10,1;UBERON:0010286,3.10e-10,1;UBERON:0003112,9.82e-10,1;UBERON:0011158,9.82e-10,1;UBERON:0003128,9.82e-10,1;UBERON:0001703,9.82e-10,1;UBERON:0002241,9.82e-10,1;UBERON:0004761,9.82e-10,1;UBERON:0009617,9.82e-10,1;UBERON:0003929,1.49e-09,54;UBERON:0005172,1.49e-09,54;UBERON:0005173,1.49e-09,54;UBERON:0001016,1.70e-09,89;UBERON:0003075,8.41e-09,82;UBERON:0007284,8.41e-09,82;UBERON:0004111,1.05e-08,240;UBERON:0002530,1.18e-08,59;UBERON:0002417,1.72e-08,60;UBERON:0000916,1.72e-08,60;UBERON:0002346,2.51e-08,86 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.8291614912042,18.6737171168749,2.95394953340702,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36994326789761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7301702225266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0.295547618953547,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0.802577647298789,2.57690890297873,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.32746074185491,0,0,0,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,1.64286454670392,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,6.22387140227067,7.91192240459198,6.06631894687664,0,0,0,0.953423842781029,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,4.39656701034247,5.30027555648885,1.42211251997706,3.30581504356725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854183854313742,0.751145584238999,1.72022758707021,2.99508439149501,0.683060432355218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0.957803154342908,0,0,0.276629009856872,1.61475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0.781078098613847,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.40781839786099,0.657727735628491,0,0,0,0.471346769748006,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,3.72986087518396,0.891139200981258,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,4.73020624399789,0,0.543931921527318,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,3.10298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.8291614912042,18.6737171168749,2.95394953340702,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36994326789761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7301702225266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0.295547618953547,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0.802577647298789,2.57690890297873,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.32746074185491,0,0,0,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,1.64286454670392,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,6.22387140227067,7.91192240459198,6.06631894687664,0,0,0,0.953423842781029,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,4.39656701034247,5.30027555648885,1.42211251997706,3.30581504356725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854183854313742,0.751145584238999,1.72022758707021,2.99508439149501,0.683060432355218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0.957803154342908,0,0,0.276629009856872,1.61475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0.781078098613847,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.40781839786099,0.657727735628491,0,0,0,0.471346769748006,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,3.72986087518396,0.891139200981258,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,4.73020624399789,0,0.543931921527318,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,3.10298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@TF | |||
}} | }} |
Latest revision as of 21:40, 24 September 2015
Short description: | p6@TF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TF_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 24bp_to_ENST00000462495_5end |
EntrezGene: | TF |
HGNC: | 11740 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.92e-26 | 12 |