FFCP PHASE1:Hg19::chr3:14989186..14989193,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:14989186..14989193,+
|short_description=p10@NR2C2
|description=CAGE_peak_10_at_NR2C2_5end
|association_with_transcript=-18bp_to_ENST00000435454_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7182 | |EntrezGene=7182 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7972 | |HGNC=7972 | ||
|TSSclassifier=strong | |||
|UniProt=C9J2Y1 | |UniProt=C9J2Y1 | ||
|association_with_transcript=-18bp_to_ENST00000435454_5end | |||
|cluster_id=chr3:14989186..14989193,+ | |||
|description=CAGE_peak_10_at_NR2C2_5end | |||
|id=chr3:14989186..14989193,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;8.99e-22;5!CL:0000163;2.23e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,7.82e-22,5;CL:0002028,7.82e-22,5;CL:0000163,2.06e-12,9 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.37e-13;1!UBERON:0010122;3.92e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.15e-19!115;UBERON:0001049!1.49e-08!57;UBERON:0005068!1.49e-08!57;UBERON:0006241!1.49e-08!57;UBERON:0007135!1.49e-08!57;UBERON:0000955!2.54e-07!69;UBERON:0006238!2.54e-07!69;UBERON:0002616!3.70e-07!59;UBERON:0002346!5.00e-07!90;UBERON:0003080!8.31e-07!42;UBERON:0003075!9.07e-07!86;UBERON:0007284!9.07e-07!86;UBERON:0001017!9.42e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;5.37e-13;1!UBERON:0002171;5.37e-13;1!UBERON:0001785;5.37e-13;1!UBERON:0002464;5.37e-13;1!UBERON:0004904;5.37e-13;1!UBERON:0001021;5.37e-13;1!UBERON:0006518;5.37e-13;1!UBERON:0008949;5.37e-13;1!UBERON:0000101;5.37e-13;1!UBERON:0002167;5.37e-13;1!UBERON:0000007;3.92e-07;2!UBERON:0001873;3.92e-07;2!UBERON:0003714;3.92e-07;2!UBERON:0005162;3.92e-07;2!UBERON:0000122;3.92e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,4.23e-13,1;UBERON:0006518,4.23e-13,1;UBERON:0008949,4.23e-13,1;UBERON:0000101,4.23e-13,1;UBERON:0002167,4.23e-13,1;UBERON:0000941,6.06e-13,1;UBERON:0001785,6.06e-13,1;UBERON:0002464,6.06e-13,1;UBERON:0004904,6.06e-13,1;UBERON:0001021,6.06e-13,1;UBERON:0003902,6.06e-13,1;UBERON:0005425,6.06e-13,1;UBERON:0001873,3.28e-07,2;UBERON:0010122,3.28e-07,2;UBERON:0003714,4.17e-07,2;UBERON:0005162,4.17e-07,2;UBERON:0000122,4.17e-07,2;UBERON:0000007,5.28e-07,2 | |||
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| ||
|short_description=p10@NR2C2 | |||
}} | }} |
Latest revision as of 23:17, 15 September 2015
Short description: | p10@NR2C2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_NR2C2_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_ENST00000435454_5end |
EntrezGene: | NR2C2 |
HGNC: | 7972 |
UniProt: | C9J2Y1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 7.82e-22 | 5 |
basophil mast progenitor cell | 7.82e-22 | 5 |
endocrine cell | 2.06e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 4.23e-13 | 1 |
right lung lobe | 4.23e-13 | 1 |
lower lobe of lung | 4.23e-13 | 1 |
lobe of lung | 4.23e-13 | 1 |
right lung | 4.23e-13 | 1 |
cranial nerve II | 6.06e-13 | 1 |
cranial nerve | 6.06e-13 | 1 |
nerve trunk | 6.06e-13 | 1 |
nerve connecting eye with brain | 6.06e-13 | 1 |
nerve | 6.06e-13 | 1 |
retinal neural layer | 6.06e-13 | 1 |
presumptive neural retina | 6.06e-13 | 1 |
caudate nucleus | 3.28e-07 | 2 |
future caudate nucleus | 3.28e-07 | 2 |
neural tissue | 4.17e-07 | 2 |
multi cell component structure | 4.17e-07 | 2 |
neuron projection bundle | 4.17e-07 | 2 |
pituitary gland | 5.28e-07 | 2 |