FFCP PHASE1:Hg19::chr5:179263519..179263607,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:179263519..179263607,+
|short_description=p@chr5:179263519..179263607,+
|description=CAGE_peak_at_chr5:179263519..179263607,+
|association_with_transcript=...") |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:179263519..179263607,+ | |||
|coexpression_cluster_id=C4489 | |||
|description=CAGE_peak_at_chr5:179263519..179263607,+ | |||
|id=chr5:179263519..179263607,+ | |||
|ontology_enrichment_celltype=CL:0000222!5.64e-10!119;CL:0000077!1.37e-07!19;CL:0000213!2.20e-07!57;CL:0000215!2.20e-07!57;CL:0000220!5.36e-07!246;CL:0002321!5.91e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.04e-12;33!CL:0002057;4.04e-12;33!CL:0000473;2.73e-11;39!CL:0000234;2.73e-11;39!CL:0000077;3.22e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.06e-10,48;CL:0000234,5.06e-10,48;CL:0000839,2.02e-09,66;CL:0000222,2.15e-09,121;CL:0000077,2.29e-09,19;CL:0000557,3.38e-09,67;CL:0000213,1.20e-08,58;CL:0000215,1.20e-08,58;CL:0000860,1.69e-08,42;CL:0002057,1.69e-08,42;CL:0002194,1.69e-08,59;CL:0000576,1.69e-08,59;CL:0000040,1.69e-08,59;CL:0000559,1.69e-08,59;CL:0002009,2.79e-08,61;CL:0000766,6.63e-08,72 | |||
|ontology_enrichment_development_v019=CL:0002057;7.48e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!9.99e-11!448;UBERON:0004120!9.99e-11!448;UBERON:0006603!9.99e-11!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.55e-13,315;UBERON:0004120,2.55e-13,315;UBERON:0006603,2.55e-13,315;UBERON:0002405,8.02e-09,93;UBERON:0002371,8.89e-09,76;UBERON:0003081,2.34e-08,203;UBERON:0001474,1.13e-07,82;UBERON:0002204,1.50e-07,167;UBERON:0004765,6.26e-07,90 | |||
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| ||
|short_description=p@chr5:179263519..179263607,+ | |||
}} | }} |
Latest revision as of 13:54, 30 July 2015
Short description: | p@chr5:179263519..179263607, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:179263519..179263607, + |
Coexpression cluster: | C4489_Osteoblast_CD14_leiomyoma_Monocytederived_mesothelioma_Prostate_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.06e-10 | 48 |
phagocyte | 5.06e-10 | 48 |
myeloid lineage restricted progenitor cell | 2.02e-09 | 66 |
mesodermal cell | 2.15e-09 | 121 |
mesothelial cell | 2.29e-09 | 19 |
granulocyte monocyte progenitor cell | 3.38e-09 | 67 |
lining cell | 1.20e-08 | 58 |
barrier cell | 1.20e-08 | 58 |
classical monocyte | 1.69e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.69e-08 | 42 |
monopoietic cell | 1.69e-08 | 59 |
monocyte | 1.69e-08 | 59 |
monoblast | 1.69e-08 | 59 |
promonocyte | 1.69e-08 | 59 |
macrophage dendritic cell progenitor | 2.79e-08 | 61 |
myeloid leukocyte | 6.63e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 2.55e-13 | 315 |
mesoderm-derived structure | 2.55e-13 | 315 |
presumptive mesoderm | 2.55e-13 | 315 |
immune system | 8.02e-09 | 93 |
bone marrow | 8.89e-09 | 76 |
lateral plate mesoderm | 2.34e-08 | 203 |
bone element | 1.13e-07 | 82 |
musculoskeletal system | 1.50e-07 | 167 |
skeletal element | 6.26e-07 | 90 |