FFCP PHASE1:Hg19::chr6:44310376..44310413,+: Difference between revisions
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|id=chr6:44310376..44310413,+
|short_description=p1@SPATS1
|description=CAGE_peak_1_at_SPATS1_5end
|association_with_transcript=0bp_to_ENST00000323108,ENST000005152...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=221409 | |EntrezGene=221409 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22957 | |HGNC=22957 | ||
|TSSclassifier=strong | |||
|UniProt=Q496A3 | |UniProt=Q496A3 | ||
|association_with_transcript=0bp_to_ENST00000323108,ENST00000515220,NM_145026_5end | |||
|cluster_id=chr6:44310376..44310413,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_SPATS1_5end | |||
|id=chr6:44310376..44310413,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.89e-11;2!UBERON:0009117;4.75e-09;10!UBERON:0005564;4.75e-09;10!UBERON:0008947;9.22e-07;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.19e-32!57;UBERON:0005068!1.19e-32!57;UBERON:0006241!1.19e-32!57;UBERON:0007135!1.19e-32!57;UBERON:0007023!1.27e-30!115;UBERON:0002616!1.81e-28!59;UBERON:0002780!1.10e-24!41;UBERON:0001890!1.10e-24!41;UBERON:0006240!1.10e-24!41;UBERON:0003080!5.12e-24!42;UBERON:0003075!5.24e-24!86;UBERON:0007284!5.24e-24!86;UBERON:0000955!3.11e-23!69;UBERON:0006238!3.11e-23!69;UBERON:0001017!6.09e-23!82;UBERON:0002346!1.09e-22!90;UBERON:0005743!1.23e-21!86;UBERON:0000073!5.45e-21!94;UBERON:0001016!5.45e-21!94;UBERON:0002298!1.51e-18!8;UBERON:0003056!1.93e-17!61;UBERON:0001893!2.89e-17!34;UBERON:0002308!1.34e-16!9;UBERON:0000125!1.34e-16!9;UBERON:0009663!2.98e-15!7;UBERON:0002791!3.19e-15!33;UBERON:0002020!1.30e-14!34;UBERON:0003528!1.30e-14!34;UBERON:0001896!4.47e-14!3;UBERON:0005290!4.47e-14!3;UBERON:0010096!4.47e-14!3;UBERON:0000153!4.66e-14!129;UBERON:0007811!4.66e-14!129;UBERON:0001869!4.98e-13!32;UBERON:0000033!3.58e-12!123;UBERON:0002420!8.41e-12!9;UBERON:0007245!8.41e-12!9;UBERON:0010009!8.41e-12!9;UBERON:0010011!8.41e-12!9;UBERON:0000454!8.41e-12!9;UBERON:0000369!1.58e-10!4;UBERON:0002435!1.58e-10!4;UBERON:0000204!1.58e-10!4;UBERON:0010082!1.58e-10!4;UBERON:0000025!2.20e-10!194;UBERON:0004121!2.80e-10!169;UBERON:0000341!4.66e-10!2;UBERON:0003127!5.56e-10!2;UBERON:0000924!6.50e-10!173;UBERON:0006601!6.50e-10!173;UBERON:0001873!6.63e-10!2;UBERON:0010122!6.63e-10!2;UBERON:0001894!7.57e-10!7;UBERON:0006222!7.57e-10!7;UBERON:0003076!1.11e-09!15;UBERON:0003057!1.11e-09!15;UBERON:0001897!2.52e-09!2;UBERON:0004733!1.04e-08!12;UBERON:0002028!1.04e-08!12;UBERON:0007277!1.04e-08!12;UBERON:0004732!5.14e-08!13;UBERON:0004111!6.50e-08!241;UBERON:0005383!7.32e-07!3;UBERON:0005382!7.32e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;2.73e-11;2!UBERON:0000341;3.89e-11;2!UBERON:0001873;3.89e-11;2!UBERON:0000473;4.43e-11;8!UBERON:0003135;2.62e-08;11!UBERON:0001896;5.54e-08;3!UBERON:0005290;5.54e-08;3!UBERON:0005383;7.50e-08;3!UBERON:0005382;7.50e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,2.73e-11,2;UBERON:0001873,3.35e-11,2;UBERON:0010122,3.35e-11,2;UBERON:0000341,4.09e-11,2;UBERON:0000473,4.43e-11,8;UBERON:0007023,8.82e-11,114;UBERON:0003135,2.62e-08,11;UBERON:0001896,5.54e-08,3;UBERON:0005290,5.54e-08,3;UBERON:0010096,5.54e-08,3;UBERON:0005383,6.78e-08,3;UBERON:0005382,6.78e-08,3 | |||
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| ||
|short_description=p1@SPATS1 | |||
}} | }} |
Latest revision as of 00:33, 19 September 2015
Short description: | p1@SPATS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPATS1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000323108, ENST00000515220, NM_145026_5end |
EntrezGene: | SPATS1 |
HGNC: | 22957 |
UniProt: | Q496A3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 2.73e-11 | 2 |
caudate nucleus | 3.35e-11 | 2 |
future caudate nucleus | 3.35e-11 | 2 |
throat | 4.09e-11 | 2 |
testis | 4.43e-11 | 8 |
adult organism | 8.82e-11 | 114 |
male reproductive organ | 2.62e-08 | 11 |
medulla oblongata | 5.54e-08 | 3 |
myelencephalon | 5.54e-08 | 3 |
future myelencephalon | 5.54e-08 | 3 |
caudate-putamen | 6.78e-08 | 3 |
dorsal striatum | 6.78e-08 | 3 |