FFCP PHASE1:Hg19::chr6:44310421..44310440,+: Difference between revisions
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|id=chr6:44310421..44310440,+
|short_description=p3@SPATS1
|description=CAGE_peak_3_at_SPATS1_5end
|association_with_transcript=24bp_to_ENST00000323108,NM_145026_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=221409 | |EntrezGene=221409 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22957 | |HGNC=22957 | ||
|TSSclassifier=strong | |||
|UniProt=Q496A3 | |UniProt=Q496A3 | ||
|association_with_transcript=24bp_to_ENST00000323108,NM_145026_5end | |||
|cluster_id=chr6:44310421..44310440,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_SPATS1_5end | |||
|id=chr6:44310421..44310440,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;9.18e-26;2!UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0001873,9.18e-26,2;UBERON:0010122,9.18e-26,2;UBERON:0003135,4.28e-19,11;UBERON:0005383,1.12e-17,3;UBERON:0005382,1.12e-17,3;UBERON:0000369,1.29e-13,4;UBERON:0002435,1.29e-13,4;UBERON:0000204,1.29e-13,4;UBERON:0010082,1.29e-13,4;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22;UBERON:0009663,2.35e-08,7;UBERON:0002420,8.85e-07,9;UBERON:0000125,8.85e-07,9;UBERON:0007245,8.85e-07,9;UBERON:0002308,8.85e-07,9;UBERON:0010009,8.85e-07,9;UBERON:0010011,8.85e-07,9;UBERON:0000454,8.85e-07,9 | |||
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|short_description=p3@SPATS1 | |||
}} | }} |
Latest revision as of 00:34, 19 September 2015
Short description: | p3@SPATS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPATS1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 24bp_to_ENST00000323108, NM_145026_5end |
EntrezGene: | SPATS1 |
HGNC: | 22957 |
UniProt: | Q496A3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
caudate nucleus | 9.18e-26 | 2 |
future caudate nucleus | 9.18e-26 | 2 |
male reproductive organ | 4.28e-19 | 11 |
caudate-putamen | 1.12e-17 | 3 |
dorsal striatum | 1.12e-17 | 3 |
corpus striatum | 1.29e-13 | 4 |
striatum | 1.29e-13 | 4 |
ventral part of telencephalon | 1.29e-13 | 4 |
future corpus striatum | 1.29e-13 | 4 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |
telencephalic nucleus | 2.35e-08 | 7 |
basal ganglion | 8.85e-07 | 9 |
neural nucleus | 8.85e-07 | 9 |
nuclear complex of neuraxis | 8.85e-07 | 9 |
nucleus of brain | 8.85e-07 | 9 |
aggregate regional part of brain | 8.85e-07 | 9 |
collection of basal ganglia | 8.85e-07 | 9 |
cerebral subcortex | 8.85e-07 | 9 |