FFCP PHASE1:Hg19::chr7:99933703..99933723,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:99933703..99933723,+
|short_description=p2@PILRB
|description=CAGE_peak_2_at_PILRB_5end
|association_with_transcript=1bp_to_ENST00000473757_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29990 | |EntrezGene=29990 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18297 | |HGNC=18297 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_ENST00000473757_5end | |||
|cluster_id=chr7:99933703..99933723,+ | |||
|description=CAGE_peak_2_at_PILRB_5end | |||
|id=chr7:99933703..99933723,+ | |||
|ontology_enrichment_celltype=CL:0000838!6.82e-18!52;CL:0000542!1.00e-17!53;CL:0000051!1.00e-17!53;CL:0000791!6.30e-12!18;CL:0000789!6.30e-12!18;CL:0002420!6.30e-12!18;CL:0002419!6.30e-12!18;CL:0000790!6.30e-12!18;CL:0000084!7.62e-12!25;CL:0000827!7.62e-12!25;CL:0000625!5.86e-08!11;CL:0000037!7.30e-07!172;CL:0000566!7.30e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000084;3.84e-12;25!CL:0000791;3.98e-12;18!CL:0000789;3.98e-12;18!CL:0002419;3.98e-12;18!CL:0000542;4.53e-11;53!CL:0000625;4.25e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.58e-18,52;CL:0000542,8.20e-18,53;CL:0000051,8.20e-18,53;CL:0000791,5.54e-12,18;CL:0000789,5.54e-12,18;CL:0002420,5.54e-12,18;CL:0002419,5.54e-12,18;CL:0000790,5.54e-12,18;CL:0000084,6.72e-12,25;CL:0000827,6.72e-12,25;CL:0000625,5.42e-08,11;CL:0000037,7.04e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000790;3.98e-12;18!CL:0000051;4.53e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.62e-23!115;UBERON:0001049!1.17e-11!57;UBERON:0005068!1.17e-11!57;UBERON:0006241!1.17e-11!57;UBERON:0007135!1.17e-11!57;UBERON:0003080!1.52e-10!42;UBERON:0002780!3.16e-10!41;UBERON:0001890!3.16e-10!41;UBERON:0006240!3.16e-10!41;UBERON:0001017!7.71e-10!82;UBERON:0000073!1.20e-09!94;UBERON:0001016!1.20e-09!94;UBERON:0005743!5.07e-09!86;UBERON:0002020!7.04e-09!34;UBERON:0003528!7.04e-09!34;UBERON:0000955!1.17e-08!69;UBERON:0006238!1.17e-08!69;UBERON:0002616!1.70e-08!59;UBERON:0002791!2.42e-08!33;UBERON:0001869!2.74e-08!32;UBERON:0001893!3.08e-08!34;UBERON:0002619!4.75e-08!22;UBERON:0001950!1.42e-07!20;UBERON:0002346!2.73e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.06e-08;41!UBERON:0001890;5.06e-08;41!UBERON:0002619;5.27e-08;22!UBERON:0002791;7.38e-08;32!UBERON:0003528;7.77e-08;34!UBERON:0002020;7.77e-08;34!UBERON:0001869;9.06e-08;32!UBERON:0001950;1.64e-07;20!UBERON:0001893;3.13e-07;34!UBERON:0007023;4.96e-07;114!UBERON:0000073;7.45e-07;53!UBERON:0002616;7.45e-07;53!UBERON:0000956;9.66e-07;25!UBERON:0000203;9.66e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.66e-22,114;UBERON:0001049,2.13e-11,56;UBERON:0005068,2.13e-11,56;UBERON:0006241,2.13e-11,56;UBERON:0007135,2.13e-11,56;UBERON:0000073,7.18e-11,53;UBERON:0002616,7.18e-11,53;UBERON:0002780,2.84e-10,41;UBERON:0001890,2.84e-10,41;UBERON:0003080,2.84e-10,41;UBERON:0006240,2.84e-10,41;UBERON:0001016,3.54e-10,89;UBERON:0001017,1.45e-09,81;UBERON:0003528,6.43e-09,34;UBERON:0002020,6.43e-09,34;UBERON:0002791,1.77e-08,32;UBERON:0000955,2.22e-08,68;UBERON:0006238,2.22e-08,68;UBERON:0001869,2.52e-08,32;UBERON:0001893,2.84e-08,34;UBERON:0002619,4.38e-08,22;UBERON:0001950,1.32e-07,20;UBERON:0002346,2.10e-07,86;UBERON:0011216,3.33e-07,223 | |||
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| ||
|short_description=p2@PILRB | |||
}} | }} |
Latest revision as of 18:11, 24 September 2015
Short description: | p2@PILRB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PILRB_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_ENST00000473757_5end |
EntrezGene: | PILRB |
HGNC: | 18297 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 5.58e-18 | 52 |
lymphocyte | 8.20e-18 | 53 |
common lymphoid progenitor | 8.20e-18 | 53 |
mature alpha-beta T cell | 5.54e-12 | 18 |
alpha-beta T cell | 5.54e-12 | 18 |
immature T cell | 5.54e-12 | 18 |
mature T cell | 5.54e-12 | 18 |
immature alpha-beta T cell | 5.54e-12 | 18 |
T cell | 6.72e-12 | 25 |
pro-T cell | 6.72e-12 | 25 |
CD8-positive, alpha-beta T cell | 5.42e-08 | 11 |
hematopoietic stem cell | 7.04e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.66e-22 | 114 |
neural tube | 2.13e-11 | 56 |
neural rod | 2.13e-11 | 56 |
future spinal cord | 2.13e-11 | 56 |
neural keel | 2.13e-11 | 56 |
regional part of nervous system | 7.18e-11 | 53 |
regional part of brain | 7.18e-11 | 53 |
regional part of forebrain | 2.84e-10 | 41 |
forebrain | 2.84e-10 | 41 |
anterior neural tube | 2.84e-10 | 41 |
future forebrain | 2.84e-10 | 41 |
nervous system | 3.54e-10 | 89 |
central nervous system | 1.45e-09 | 81 |
brain grey matter | 6.43e-09 | 34 |
gray matter | 6.43e-09 | 34 |
regional part of telencephalon | 1.77e-08 | 32 |
brain | 2.22e-08 | 68 |
future brain | 2.22e-08 | 68 |
cerebral hemisphere | 2.52e-08 | 32 |
telencephalon | 2.84e-08 | 34 |
regional part of cerebral cortex | 4.38e-08 | 22 |
neocortex | 1.32e-07 | 20 |
neurectoderm | 2.10e-07 | 86 |
organ system subdivision | 3.33e-07 | 223 |